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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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Johns Hopkins University; Maryland; USA Resource Report Resource Website 10+ mentions |
Johns Hopkins University; Maryland; USA (RRID:SCR_010247) | JHU | university | Johns Hopkins University is private research university in Baltimore, Maryland. Founded in 1876, university was named for its first benefactor, American entrepreneur, abolitionist, and philanthropist Johns Hopkins. | private, university, Baltimore, Maryland |
uses: DIRECT2experts is affiliated with: Diabetes Research Centers is related to: Alzheimers Disease Genetics Consortium is related to: International AMD Genetics Consortium is related to: ABX Guide is related to: Clinical and Translational Science Awards Consortium is parent organization of: SynaptomeDB is parent organization of: Johns Hopkins University School of Medicine; Baltimore, Maryland; USA is parent organization of: sim4cc is parent organization of: MRI Studio is parent organization of: CKID A Prospective Cohort Study of Kidney Disease in Children is parent organization of: Nonalcoholic Steatohepatitis Clinical Research Network is parent organization of: ASprofile is parent organization of: GlimmerHMM is parent organization of: Neurogenetics and Behavior Center is parent organization of: Human Proteinpedia is parent organization of: Schramm Lab Spinal Cord Atlases is parent organization of: NetPath is parent organization of: Academic Drug Discovery Consortium is parent organization of: CardioVascular Research Grid (CVRG) is parent organization of: Johns Hopkins University; Undergraduate Neuroscience Program is parent organization of: Bowtie is parent organization of: FLASH is parent organization of: TMAJ is parent organization of: Gastroparesis Clinical Research Consortium is parent organization of: HPRD - Human Protein Reference Database is parent organization of: Atlweb: Alternatives to Animal Testing is parent organization of: Center for Inherited Disease Research is parent organization of: The Protein Coil Library is parent organization of: HIV Guide is parent organization of: Johns Hopkins School of Medicine Department of Molecular and Comparative Pathobiology is parent organization of: Classic Articles in Visual Perception is parent organization of: Experimental Man Blog is parent organization of: MYC Cancer Gene is parent organization of: JIST: Java Image Science Toolkit is parent organization of: DOTS WM tract segmentation is parent organization of: JHU Proj. in Applied Medical Imaging is parent organization of: LDDMM is parent organization of: Johns Hopkins Bloomberg School of Public Health; Maryland; USA is parent organization of: Genetic Resources Core Facility is parent organization of: LS-SNP/PDB is parent organization of: JHU Deep Sequencing and Microarray Core is parent organization of: Glimmer is parent organization of: Johns Hopkins University Labs and Facilities is parent organization of: CRAVAT is parent organization of: John Hopkins University, In-Vivo Cellular Molecular Imaging Center is parent organization of: RosettaDock is parent organization of: CoGAPS is parent organization of: Blox is parent organization of: National Resource for Quantitative Functional MRI is parent organization of: Myrna is parent organization of: CAWorks is parent organization of: Principal Components Analysis of Scalar, Vector, and Mesh Vertex Data is parent organization of: Longitudinal MS Lesion Imaging Archive is parent organization of: Image Synthesis Tools is parent organization of: Atlases of amygdala and hippocampus for pediatric populations is parent organization of: HISAT2 is parent organization of: neurodata is parent organization of: Johns Hopkins University Integrated Imaging Center Core Facility is parent organization of: Center for Computational Biology at JHU is parent organization of: TopHat is parent organization of: PyRosetta is parent organization of: Ecosystem for Multi-modal Brain-behavior Experimentation and Research is parent organization of: Brain Observatory Storage Service and Database (BossDB) is parent organization of: Johns Hopkins University School of Medicine Genetic Resources Core Facility |
, nlx_97251, Wikidata: Q193727, GRID: grid.21107.35, ISNI: 0000 0001 2171 931, Crossref Funder ID: 100007880 | https://ror.org/00za53h95 | SCR_010247 | 2026-08-21 12:39:20 | 21 | ||||||||
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ABX Guide Resource Report Resource Website 1+ mentions |
ABX Guide (RRID:SCR_008214) | ABX Guide | continuing medical education, data or information resource, database, training resource | Concise, clinically useful information for diagnosing, managing and treating infectious diseases in adults; however it does cover some pediatric topics including vaccines. It is designed for primary care providers and other non-infectious disease specialists as a tool that can be used at the point of care to assist in prescribing antibiotics. | drug interaction, drug, evaluation, antibiotic, clinical, contraindication, diagnosis, disease, disease state, dosing, immunization, indication, infectious disease, literature review, pathogen, pharmacokinetics, side effect, treatment, vaccine, antibiotic, adult, pediatric, vaccine, point of care |
is related to: Johns Hopkins Point of Care Guides is related to: Johns Hopkins University; Maryland; USA |
Infectious disease | Available for purchase | nif-0000-21292 | SCR_008214 | Johns Hopkins ABX Guide, Johns Hopkins Antibiotic Guide | 2026-08-21 12:38:36 | 4 | ||||||
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Clinical and Translational Science Awards Consortium Resource Report Resource Website 1+ mentions |
Clinical and Translational Science Awards Consortium (RRID:SCR_008339) | CTSA | knowledge environment | National consortium of medical research institutions working together to transform the local, regional, and national environment to increase the efficiency and speed of clinical and translational research across the country. Consortium members share a common vision to reduce the time it takes for laboratory discoveries to become treatments for patients, to engage communities in clinical research efforts and to train clinical and translational researchers. This consortium includes 60 medical research institutions located throughout the nation, linking them together to energize the discipline of clinical and translational science. The CTSA consortium has five Strategic Goals: * National Clinical and Translational Research Capability * The Training and Career Development of Clinical and Translational Scientists * Consortium-Wide Collaborations * The Health of our Communities and the Nation * T1 Translational Research | biomedical, clinical, community, consortium, institution, laboratory, medical, patient, research, researcher, science, translational, translational research, treatment |
is related to: REDCap is related to: eBIRT is related to: VIVO is related to: CTSA ShareCenter is related to: CUSP is related to: CDART is related to: cTAKES is related to: CTSA-IP is related to: FURTHeR is related to: HUBzero is related to: ePRISM is related to: ResearchMatch is related to: SPARC Request is related to: Albert Einstein College of Medicine; New York; USA is related to: Clinical Research Resource HUB is related to: Eagle I is related to: CTSAconnect is related to: Boston University; Massachusetts; USA is related to: Case Western Reserve University; Ohio; USA is related to: Columbia University; New York; USA is related to: Duke University; North Carolina; USA is related to: Emory University; Georgia; USA is related to: Morehouse School of Medicine; Georgia; USA is related to: Georgia Institute of Technology; Georgia; USA is related to: Georgetown University; Washington D.C.; USA is related to: Howard University; Washington D.C. is related to: Indiana University School of Medicine; Indiana; USA is related to: Johns Hopkins University; Maryland; USA is related to: Mayo Clinic is related to: Medical College of Wisconsin; Wisconsin; USA is related to: Medical University of South Carolina; South Carolina; USA is related to: Icahn School of Medicine at Mount Sinai; New York; USA is related to: New York University School of Medicine; New York; USA is related to: Northwestern University; Illinois; USA is related to: Oregon Health and Science University; Oregon; USA is related to: Penn State Milton S. Hershey Medical Center; Pennsylvania; USA is related to: Stanford University; Stanford; California is related to: Ohio State University; Ohio; USA is related to: Rockefeller University; New York; USA is related to: Scripps Research Institute is related to: University of Alabama at Birmingham; Alabama; USA is related to: University of North Carolina at Chapel Hill; North Carolina; USA is related to: University of Texas Health Science Center at San Antonio; Texas; USA is related to: University of Utah; Utah; USA is related to: Tufts University; Massachusetts; USA is related to: University of Arkansas for Medical Sciences; Arkansas; USA is related to: University of California at Los Angeles; California; USA is related to: University of California at Davis; California; USA is related to: University of California at Irvine; California; USA is related to: University of California at San Diego; California; USA is related to: University of California at San Francisco; California; USA is related to: University of Chicago; Illinois; USA is related to: University of Cincinnati; Ohio; USA is related to: University of Colorado Denver; Colorado; USA is related to: University of Florida; Florida; USA is related to: University of Illinois at Chicago; Illinois; USA is related to: University of Iowa; Iowa; USA is related to: University of Kansas Medical Center; Kansas; USA is related to: University of Massachusetts Medical School; Massachusetts; USA is related to: University of Miami; Florida; USA is related to: University of Michigan; Ann Arbor; USA is related to: University of Minnesota Twin Cities; Minnesota; USA is related to: University of New Mexico; New Mexico; USA is related to: University of Pennsylvania; Philadelphia; USA is related to: University of Pittsburgh; Pennsylvania; USA is related to: University of Rochester School of Medicine and Dentistry; New York; USA is related to: University of Southern California; Los Angeles; USA is related to: University of Texas Health Science Center at Houston; Texas; USA is related to: University of Texas Medical Branch at Galveston is related to: University of Texas Southwestern Medical Center; Texas; USA is related to: University of Washington; Seattle; USA is related to: University of Wisconsin-Madison; Wisconsin; USA is related to: Vanderbilt University; Tennessee; USA is related to: Meharry Medical College is related to: Virginia Commonwealth University; Virginia; USA is related to: Washington University in St. Louis; Missouri; USA is related to: Weill Cornell Medical College; New York; USA is related to: Hunter College; New York; USA is related to: Yale University; Connecticut; USA has parent organization: Vanderbilt University; Tennessee; USA has parent organization: U.S. Department of Health and Human Services |
National Center for Advancing Translational Sciences 2U54TR000123 | nif-0000-24968 | http://www.ctsaweb.org/ | SCR_008339 | Clinical & Translational Science Awards, Clinical and Translational Science Awards | 2026-08-15 11:23:37 | 6 | ||||||
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Alzheimers Disease Genetics Consortium Resource Report Resource Website 10+ mentions |
Alzheimers Disease Genetics Consortium (RRID:SCR_004004) | ADGC | consortium, data or information resource, data set, organization portal, portal | Consortium to conduct genome-wide association studies (GWAS) to identify genes associated with an increased risk of developing late-onset Alzheimer''''s disease (LOAD). The goal of the ADGC is to identify genetic variants associated with risk for AD. It plans to do this through the following collaborative goals: # Identify genes responsible for AD susceptibility # Identify AD sub-phenotype genes rate-of-progression plaque / tangle load / distribution biomarker variability # Generate a genetic data resource for the AD research community Data generated by ADGC is available at the following website: https://www.niagads.org/content/alzheimers-disease-genetics-consortium-adgc-collection | genome-wide association study, gene, biomarker, basic science, genetic variant, genetics, african-american, caucasian |
is listed by: Consortia-pedia is related to: University of Pennsylvania Perelman School of Medicine; Pennsylvania; USA is related to: Icahn School of Medicine at Mount Sinai; New York; USA is related to: University of Washington; Seattle; USA is related to: Boston University; Massachusetts; USA is related to: Washington University in St. Louis; Missouri; USA is related to: Vanderbilt University; Tennessee; USA is related to: Oregon Health and Science University; Oregon; USA is related to: Columbia University; New York; USA is related to: University of Miami; Florida; USA is related to: Banner Alzheimer's Institute; Arizona; USA is related to: Indiana University; Indiana; USA is related to: University of Toronto; Ontario; Canada is related to: Mayo Clinic Florida; Florida; USA is related to: Johns Hopkins University; Maryland; USA is related to: Albert Einstein College of Medicine; New York; USA is related to: Genentech is related to: University of Gothenburg; Gothenburg; Sweden is related to: University of North Texas; Texas; USA is related to: University of Kentucky; Kentucky; USA is related to: University of Chicago; Illinois; USA is related to: University of Michigan; Ann Arbor; USA is related to: University of Virginia; Virginia; USA is related to: Florida Alzheimer's Disease Research Center is related to: Mayo Clinic is related to: Emory University; Georgia; USA is related to: New York University; New York; USA is related to: Stanford University; Stanford; California is related to: Northwestern University Feinberg School of Medicine; Illinois; USA is related to: University of Alabama; Alabama; USA is related to: University of Arkansas for Medical Sciences; Arkansas; USA is related to: University of San Diego; California; USA is related to: University of California at Irvine; California; USA is related to: University of California at Los Angeles; California; USA is related to: University of California at San Diego; California; USA is related to: University of California at San Francisco; California; USA is related to: University of Pittsburgh; Pennsylvania; USA is related to: University of Southern California; Los Angeles; USA is related to: University of Texas Southwestern Medical Center; Texas; USA is related to: National Alzheimer's Coordinating Center is related to: Childrens Hospital of Philadelphia - Research Institute; Pennsylvania; USA is related to: National Institute on Aging is related to: University of California at Davis; California; USA is related to: Mayo Clinic College of Medicine is related to: Wake Forest University; North Carolina; USA is related to: National Cell Repository for Alzheimer's Disease is related to: International Genomics of Alzheimers Project is related to: National Alzheimer's Coordinating Center has parent organization: University of Pennsylvania Perelman School of Medicine; Pennsylvania; USA |
NIA UO1AG032984 | nlx_158415 | SCR_004004 | Alzheimer''''s Disease Genetics Consortium (ADGC), Alzheimer''''s Disease Genetics Consortium | 2026-08-21 12:37:26 | 12 | |||||||
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International AMD Genetics Consortium Resource Report Resource Website 10+ mentions |
International AMD Genetics Consortium (RRID:SCR_004009) | IAMDGC | consortium, data or information resource, organization portal, portal | Consortium aiming to identify the remaining genetic risk variants for Age-related Macular Degeneration (AMD). To increase the statistical power needed to identify genes that have small, yet significant contributions to AMD, the consortium is conducting a meta-analysis on 15 Genome Wide Association Studies (GWAS) pooled from consortium members representing over 8,000 patients with advanced AMD (dry type, neovascular, or both) and 50,000 controls. In addition to verifying known genes, the consortium identified 19 new gene variants. The genes identified in these studies function in the immune system, cholesterol transport and metabolism, and formation and maintenance of connective tissue. This study provides a nearly complete picture of genetic heritability for AMD. | genetic variant, genome-wide association study, gene, risk factor, genetics, visual system, eye, late adult human, basic science, biomarker |
is related to: National Eye Institute (NEI) Commons is related to: Boston University; Massachusetts; USA is related to: University of Regensburg; Bavaria; Germany is related to: Vanderbilt University; Tennessee; USA is related to: Case Western Reserve University; Ohio; USA is related to: University of Pittsburgh; Pennsylvania; USA is related to: Harvard Medical School; Massachusetts; USA is related to: University of Edinburgh; Scotland; United Kingdom is related to: Queens University Belfast; Ireland; United Kingdom is related to: Columbia University; New York; USA is related to: Johns Hopkins University; Maryland; USA is related to: University of Cambridge; Cambridge; United Kingdom is related to: University of Southampton; Southampton; United Kingdom is related to: University College London; London; United Kingdom is related to: University of Athens; Athens; Greece is related to: University of Thessaly; Thessaly; Greece is related to: University of Sydney; Sydney; Australia is related to: University of Melbourne; Victoria; Australia is related to: Flinders University; Adelaide; Australia is related to: Lions Eye Institute for Transplant and Research is related to: University of Western Australia; Perth; Australia is related to: National Institute of Health and Medical Research; Rennes; France is related to: Centre dEtude du Polymorphisme Humain is related to: University of Pennsylvania; Philadelphia; USA is related to: University of Miami; Florida; USA is related to: Texas Biomedical Research Institute; Texas; USA is related to: University of Utah; Utah; USA is related to: University of California at San Diego; California; USA is related to: University of California at Los Angeles; California; USA is related to: Oregon Health and Science University; Oregon; USA is related to: University of Michigan; Ann Arbor; USA has parent organization: Case Western Reserve University; Ohio; USA has parent organization: National Eye Institute (NEI) Commons |
NEI | nlx_158429, SCR_013676 | SCR_004009 | International Age-related Macular Degeneration Genetics Consortium | 2026-08-21 12:37:21 | 13 | |||||||
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TMAJ Resource Report Resource Website 10+ mentions |
TMAJ (RRID:SCR_005601) | TMAJ | software resource | Open-source software to support information and images related to tissue micro-arrays. It contains support for multiple organ systems, multiple users, image analysis, and is designed to be compliant with HIPPA regulations. Patients, specimens, blocks, slides, cores, images, and scores can all be stored and viewed. Features include advanced security, custom dynamic fields, and an image analysis program. | tissue microarray, java, java swing, bio.tools |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian has parent organization: Johns Hopkins University; Maryland; USA has parent organization: SourceForge |
GNU General Public License, v3 | biotools:tmaj, OMICS_00823 | https://bio.tools/tmaj | SCR_005601 | TMAJ Software Project | 2026-08-15 11:23:16 | 10 | ||||||
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Myrna Resource Report Resource Website 1+ mentions |
Myrna (RRID:SCR_006951) | Myrna | software resource | A cloud computing tool for calculating differential gene expression in large RNA-seq datasets. It uses Bowtie for short read alignment and R/Bioconductor for interval calculations, normalization, and statistical testing. These tools are combined in an automatic, parallel pipeline that runs in the cloud (Elastic MapReduce in this case) on a local Hadoop cluster, or on a single computer, exploiting multiple computers and CPUs wherever possible. | mapreduce, hadoop, cloud computing, differential expression, gene expression, rna-seq, bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools is related to: ReCount - A multi-experiment resource of analysis-ready RNA-seq gene count datasets has parent organization: Johns Hopkins University; Maryland; USA |
PMID:20701754 | Artistic License | OMICS_01310, biotools:myrna | https://github.com/BenLangmead/myrna, https://bio.tools/myrna | SCR_006951 | Myrna: Cloud-scale differential gene expression for RNA-seq | 2026-08-15 11:23:30 | 2 | |||||
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RosettaDock Resource Report Resource Website 100+ mentions |
RosettaDock (RRID:SCR_013393) | RosettaDock | software resource | Predicts the structure of a protein-protein complex from the individual structures of the monomer components. |
is listed by: OMICtools has parent organization: Johns Hopkins University; Maryland; USA |
OMICS_01604 | SCR_013393 | 2026-08-15 11:24:55 | 125 | ||||||||||
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JHU Proj. in Applied Medical Imaging Resource Report Resource Website |
JHU Proj. in Applied Medical Imaging (RRID:SCR_009499) | JHU Proj. in Applied Medical Imaging | software resource | This project is used for students enrolled in courses using the JIST framework. Content in this CVS is freely available, but it is not intended for any specific purpose. | magnetic resonance |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: JIST: Java Image Science Toolkit has parent organization: Johns Hopkins University; Maryland; USA |
Free | nlx_155647 | SCR_009499 | 2026-08-15 11:23:47 | 0 | ||||||||
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LDDMM Resource Report Resource Website 10+ mentions |
LDDMM (RRID:SCR_009590) | LDDMM | software application, software resource | Software application which aims to assign metric distances on the space of anatomical images in Computational Anatomy thereby allowing for the direct comparison and quantization of morphometric changes in shapes. As part of these efforts the Center for Imaging Science at Johns Hopkins University developed techniques to not only compare images, but also to visualize the changes and differences. For additional information please refer to: Faisal Beg, Michael Miller, Alain Trouve, and Laurent Younes. Computing Large Deformation Metric Mappings via Geodesic Flows of Diffeomorphisms. International Journal of Computer Vision, Volume 61, Issue 2; February 2005. M.I. Miller and A. Trouve and L. Younes, On the Metrics and Euler-Lagrange Equations of Computational Anatomy, Annual Review of biomedical Engineering, 4:375-405, 2002. Software developed with support from National Institutes of Health NCRR grant P41 RR15241. | analyze, c++, console (text based), linux, microsoft, magnetic resonance, posix/unix-like, shape analysis, win32 (ms windows), windows |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: Johns Hopkins University; Maryland; USA |
nlx_155780 | http://www.nitrc.org/projects/lddmm-volume | SCR_009590 | Large Deformation Diffeomorphic Metric Mapping | 2026-08-20 09:28:32 | 31 | |||||||
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CRAVAT Resource Report Resource Website 10+ mentions |
CRAVAT (RRID:SCR_012776) | CRAVAT | analysis service resource, data analysis service, production service resource, service resource | A web-based application designed with an easy-to-use interface to facilitate the high-throughput assessment and prioritization of genes and missense alterations important for cancer tumorigenesis. |
is listed by: OMICtools has parent organization: Johns Hopkins University; Maryland; USA |
Cancer | NCI CA 152432; NSF DBI 0845275; NCI 1U01CA180956-01 |
OMICS_00147 | SCR_012776 | cancer-related analysis of variants toolkit | 2026-08-20 09:28:59 | 30 | |||||||
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CardioVascular Research Grid (CVRG) Resource Report Resource Website 1+ mentions |
CardioVascular Research Grid (CVRG) (RRID:SCR_004472) | CVRG | analysis service resource, atlas, data analysis service, data or information resource, data repository, image repository, production service resource, service resource, storage service resource | Infrastructure for sharing cardiovascular data and data analysis tools. Human ExVivo heart data set and canine ExVivo normal and failing heart data sets are available. Canine hearts atlas and human InVivo atlases are available. | human, heart, canine, ex vivo, in vivo, protein microarray, cardiomyopathy, electrocardiogram, heart fiber, data sharing, microarray, data analysis tool, data analysis, mri, diffusion magnetic resonance imaging, diffusion weighted imaging, dti, cardiovascular, source code, web service, imaging |
is recommended by: National Library of Medicine is related to: Galaxy is related to: XNAT - The Extensible Neuroimaging Archive Toolkit is related to: NIH Data Sharing Repositories has parent organization: Johns Hopkins University; Maryland; USA is parent organization of: Cardiac Electrophysiology Ontology is parent organization of: Electrocardiography Ontology |
Normal, Failing heart, Cardiomyopathy, Ischemic cardiomyopathy, Non-ischemic cardiomyopathy | NHLBI R24 HL085343 | Free, Freely Available | r3d100012849, nlx_143758 | https://doi.org/10.17616/R3323J | SCR_004472 | The Cardiovascular Research Grid, Cardio Research Grid | 2026-08-21 12:37:37 | 4 | ||||
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Johns Hopkins University; Undergraduate Neuroscience Program Resource Report Resource Website |
Johns Hopkins University; Undergraduate Neuroscience Program (RRID:SCR_004638) | data or information resource, degree granting program, department portal, organization portal, portal, training resource, undergraduate program resource | Undergraduate Program in Neuroscience offers broad overview of field, as well as more advanced training in one of four specialized areas: cellular and molecular, cognitive, computational, or systems neuroscience. | has parent organization: Johns Hopkins University; Maryland; USA | nlx_63501 | http://krieger.jhu.edu/neuroscience/undergraduate/index.html | SCR_004638 | JHU Undergraduate Neuroscience, Johns Hopkins University; Undergraduate Program in Neuroscience | 2026-08-21 12:37:38 | 0 | |||||||||
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Bowtie Resource Report Resource Website 10000+ mentions |
Bowtie (RRID:SCR_005476) | alignment software, data analysis software, data processing software, image analysis software, sequence analysis software, software application, software resource | Software ultrafast memory efficient tool for aligning sequencing reads. Bowtie is short read aligner. | sequence, analysis, long, reference, read, alignment, gap, local, pair, end, rna, rnaseq, bio.tools |
is used by: deFuse is used by: Short Read Sequence Typing for Bacterial Pathogens is used by: TopHat is used by: BS Seeker is listed by: OMICtools is listed by: bio.tools is listed by: Debian is listed by: SoftCite is related to: Bowtie 2 has parent organization: Johns Hopkins University; Maryland; USA is required by: RelocaTE |
Amazon Web Services in Education Research ; NHGRI R01 HG006102; NIGMS R01 GM083873 |
PMID:19261174 DOI:10.1186/gb-2009-10-3-r25 |
Free, Available for download, Freely available | biotools:bowtie, OMICS_00653 | https://github.com/BenLangmead/bowtie, https://bio.tools/bowtie, https://sources.debian.org/src/bowtie/ | SCR_005476 | 2026-08-21 12:37:41 | 13799 | ||||||
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Academic Drug Discovery Consortium Resource Report Resource Website 1+ mentions |
Academic Drug Discovery Consortium (RRID:SCR_003706) | ADDC, aD2c | consortium, data or information resource, organization portal, portal | A collaborative network among university-led drug discovery centers and programs to allow scientists to exchange technical expertise on drug discovery and development strategies as well as form partnerships with each other, biopharma companies, and drug discovery-focused contract service organizations and consultants. The website will also serve as a repository for drug discovery events, educational material, job postings, and partnership opportunities. Through active member participation this website will become a valuable tool for every scientist working in the drug discovery arena. In addition, involvement of members will enable them to effectively advocate to the NIH and other funding agencies to increase the awareness of the growing number of academic drug discovery scientists and their success as well as their needs. | drug, consortium, drug discovery |
is listed by: Consortia-pedia has parent organization: Johns Hopkins University; Maryland; USA |
SciRes_000146, nlx_157873 | SCR_003706 | Academic Drug Discovery Consortium (ADDC) | 2026-08-21 12:37:17 | 4 | ||||||||
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Human Proteinpedia Resource Report Resource Website 10+ mentions |
Human Proteinpedia (RRID:SCR_002948) | Human Proteinpedia | data or information resource, data repository, database, service resource, storage service resource | A community portal for sharing and integration of human protein data that allows research laboratories to contribute and maintain protein annotations. The Human Protein Reference Database (HPRD) integrates data that is deposited along with the existing literature curated information in the context of an individual protein. Data pertaining to post-translational modifications, protein-protein interactions, tissue expression, expression in cell lines, subcellular localization and enzyme substrate relationships can be submitted. | enzyme, protein expression, post-translational modification, protein-protein interaction, subcellular localization, enzyme substrate, tissue expression, protein, protein binding, peptide, mass spectrometry, mass spectrometry spectra, immunohistochemistry, western blotting, microarray, co-immunoprecipitation, fluorescence, annotation, cell line expression, disease tissue expression, FASEB list |
is listed by: re3data.org is related to: HPRD - Human Protein Reference Database has parent organization: Johns Hopkins University; Maryland; USA has parent organization: Institute of Bioinformatics; Bangalore; India |
PMID:18259167 | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-02999, r3d100010985 | https://doi.org/10.17616/R3V62C | SCR_002948 | 2026-08-21 12:36:51 | 32 | ||||||
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Neurogenetics and Behavior Center Resource Report Resource Website |
Neurogenetics and Behavior Center (RRID:SCR_002851) | analysis service resource, behavioral analysis service, data or information resource, portal, production service resource, service resource, topical portal | This center provides routine behavioral/cognitive testing of mice with phenotypes that are expressed as a consequence of alterations at the level of gene function, and that are relevant to basic neuroscience and to animal models of neurological and psychiatric disorders. Current Research Behavioral testing within the center involves a collaborative component in which mice provided by users are assessed for behavioral/cognitive functions. All research includes behavioral assessment of a variety of genetically altered mice provided by users. Services Provided The objective of the center is to provide a link between genetic and molecular analysis of neural function and the study of integrative systems and clinical conditions through behavioral assessment of animal models, and mouse behavioral phenotypes generated by genetic modification. Sponsors: This resource is supported by the National Center of Research Resources (Grant Number: P40 RR017688). | function, gene, animal, behavioral, clinical, cognitive, disorder, model, mouse, neural, neurological, neuroscience, phenotype, psychiatric, testing | has parent organization: Johns Hopkins University; Maryland; USA | Free, Freely available | nif-0000-25310 | SCR_002851 | NBC | 2026-08-21 12:36:50 | 0 | ||||||||
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sim4cc Resource Report Resource Website |
sim4cc (RRID:SCR_001204) | alignment software, data processing software, image analysis software, software application, software resource | Software tool as cross species spliced alignment program.Heuristic sequence alignment tool for comparing cDNA sequence with genomic sequence containing homolog of gene in another species. | Cross species spliced alignment, unix, sequence alignment, cdna sequence, genomic sequence, homolog, gene, splice, bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools has parent organization: Johns Hopkins University; Maryland; USA |
NLM R01 LM006845; NSF CLS20163A; Sloan Research Fellowship |
PMID:19429899 | Free, Available for download, Freely available | biotools:sim4cc, OMICS_02145 | https://bio.tools/sim4cc | SCR_001204 | 2026-08-21 12:36:21 | 0 | ||||||
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MRI Studio Resource Report Resource Website 100+ mentions |
MRI Studio (RRID:SCR_001398) | data processing software, data visualization software, image analysis software, image processing software, software application, software resource | An image processing program running under Windows suitable for such tasks as tensor calculation, color mapping, fiber tracking, and 3D visualization. Most of operations can be done with only a few clicks. This tool evolved from DTI Studio. Tools in the program can be grouped in the following way: * Image Viewer * Diffusion Tensor Calculations * Fiber Tracking and Editing * 3D Visualization * Image File Management * Region of Interesting (ROI) Drawing and Statistics * Image Registration | tensor calculation, color mapping, fiber tracking, 3d visualization, dti, image registration, mri, diffusion mr fiber tracking, microsoft, c++, analyze |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: Diffusion Tensor Imaging ToolKit has parent organization: Johns Hopkins University; Maryland; USA works with: UManitoba - JHU Functionally Defined Human White Matter Atlas |
NCRR ; Biomedical Informatics Research Network ; NIBIB |
Free, Freely Available | nif-0000-00291 | http://www.nitrc.org/projects/mri_studio | SCR_001398 | dtiStudio, DTI Studio | 2026-08-21 12:36:23 | 180 | ||||||
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CKID A Prospective Cohort Study of Kidney Disease in Children Resource Report Resource Website 10+ mentions |
CKID A Prospective Cohort Study of Kidney Disease in Children (RRID:SCR_001500) | CKID | bibliography, data or information resource, disease-related portal, portal, research forum portal, resource, topical portal | Prospective, observational cohort study of children with mild to moderate chronic kidney disease (CKD) to: (1) determine risk factors for progression of pediatric chronic kidney disease (CKD); (2) examine the impact of CKD on neurocognitive development; (3) examine the impact of CKD on risk factors for cardiovascular disease, and; (4) examine the impact of CKD on growth. The CKiD study population will include a cohort of 540 children, age 1 16 years, expected to be enrolled over a 24-month period. | child, young human, pediatric, risk factor, kidney function, neurodevelopment, cognitive ability, behavior, kidney, urologic problem, glomerular disease, adverse effect, cognition, growth, adolescent, infant, clinical |
is listed by: NIDDK Information Network (dkNET) has parent organization: Johns Hopkins University; Maryland; USA |
Chronic kidney disease, Renal disease, Cardiovascular disease | NIDDK U01DK066174; NCRR M01RR000052 |
Free, Freely available | nlx_152790 | SCR_001500 | CKID: A Prospective Cohort Study of Kidney Disease in Children, Chronic Kidney Disease in Children | 2026-08-21 12:36:24 | 10 |
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The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant U24DK097771.
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