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https://scialli.utk.edu/

Organization mission is to expand cooperative ventures in research with Oak Ridge National Laboratory and enhance science and engineering research programs at University of Tennessee. Organization is affiliated with Tennessee Center of Excellence. Funding resource.

Proper citation: Science Alliance (RRID:SCR_023040) Copy   

•   Source: SciCrunch Registry

https://sufuorg.com/home.aspx

Organization to optimize the care of women, men, and children with lower urinary tract dysfunction and/or pelvic floor disorders through education, research and involvement in health care policy. To improve the art and science of Urology through basic and applied clinical research in urodynamics and neurourology, voiding function and dysfunction, female urology and pelvic floor dysfunction, and to disseminate and teach these concepts.

Proper citation: Society of Urodynamics, Female Pelvic Medicine and Urogenital Reconstruction (SUFU) (RRID:SCR_022874) Copy   

•   Source: SciCrunch Registry

https://www.iveindhoven.com/en/article/reichert-jung-ultracut-e-ultramicrotome/

Reichert Jung Ultracut E, article number 131-960, is used to cut ultrathin and semithin sections of resin embedded samples for electron microscopy.

Proper citation: Ultracut: E ultramicrotome (RRID:SCR_022980) Copy   

•   Source: SciCrunch Registry

https://www.bertin-technologies.com/product/sample-preparation-homogenizers/precellys24-tissue-homogenizer/

The Precellys 24 homogenizer with automatic tube locking system with the ability to process up to 24 tubes simultaneously., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

Proper citation: Bertin Technologies: Precellys 24 tissue homogenizer (RRID:SCR_022979) Copy   

•   Source: SciCrunch Registry

https://www.inscopix.com/nvoke

Miniature microscope system that integrates in vivo cellular resolution calcium imaging with simultaneous or sequential optogenetic manipulation to causally link neural circuit activity with behavior.

Proper citation: iNSCOPIX: nVoke System (RRID:SCR_023028) Copy   

•   Source: SciCrunch Registry

http://arrowsmith.psych.uic.edu/cgi-bin/arrowsmith_uic/AnneOTate.cgi

Web search tool to gain overview of set of articles retrieved by PubMed query. Used to support user driven summarization, drill down and browsing of PubMed search results. Value-added PubMed search engine for analysis and text mining.

Proper citation: Anne O'Tate (RRID:SCR_023086) Copy   

•   Source: SciCrunch Registry

https://s-risk.be/en

Web tool for assessing exposure and human health risks at contaminated sites. Fate and distribution of chemical pollutants in soil are calculated according to steady-state conservation of mass principles.Risks are calculated by comparing exposures with toxicological reference values and concentrations with toxicological or legal reference concentrations.

Proper citation: S-Risk (RRID:SCR_023085) Copy   

•   Source: SciCrunch Registry

http://www.bioconductor.org/packages/2.14/bioc/html/GLAD.html

Software for analysis of array CGH data: detection of breakpoints in genomic profiles and assignment of a status (gain, normal or loss) to each chromosomal regions identified.

Proper citation: GLAD (RRID:SCR_001284) Copy   

•   Source: SciCrunch Registry

http://sourceforge.net/projects/bycom/

A software which can perform methylcytosine calling from BS-seq (WGBS and RRBS), and permits either unmapped reads (FASTQ) or mapped reads (SAM/BAM) to be used as the input data. Certain SNPs (C>A/G) can also be selected in the output.

Proper citation: Bycom (RRID:SCR_000659) Copy   

•   Source: SciCrunch Registry

https://github.com/plaisier-lab/OncoMerge

Software tool to integrate somatic mutation types into comprehensive integrated somatic mutation matrix for downstream analyses.Somatic mutation integration platform that tames allelic heterogeneity, discovers causal mutations, integrates binary PAM and fusion with quantitative CNA data types, and overcomes known obstacles in cancer genetics. Used for systematic integration of protein affecting mutations, gene fusions, and copy number alterations into comprehensive somatic mutational profile.

Proper citation: OncoMerge (RRID:SCR_023079) Copy   

•   Source: SciCrunch Registry

http://prime.psc.riken.jp/compms/msdial/main.html

Software tool for data independent MS/MS deconvolution for comprehensive metabolome analysis. Universal program for untargeted metabolomics that supports multiple instruments (GC/MS, GC/MS/MS, LC/MS, and LC/MS/MS) and MS vendors (Agilent, Bruker, LECO, Sciex, Shimadzu, Thermo, and Waters). Used for untargeted metabolomics and lipidomics supporting any type of chromatography/mass spectrometry methods.

Proper citation: MS-DIAL (RRID:SCR_023076) Copy   

•   Source: SciCrunch Registry

http://sbi.postech.ac.kr/oasis/introduction/

A tool for various statistical tasks involved in analyzing survival data which provides a uniform platform to facilitate efficient statistical analyses of survival data in the aging field. The statistical features of OASIS include the calculation of Kaplan-Meier estimates, mean/median lifespan, mortality rate, Mantel-Cox Log-Rank test, Fishers exact test, weighted Log-Rank test, Kolmogorov-Smirnov test and Neymans smooth test. Moreover, OASIS generates survival and mortality curves that can be easily exported and modified by using common graphic softwares.

Proper citation: Online Application for Survival Analysis (OASIS) (RRID:SCR_014450) Copy   

•   Source: SciCrunch Registry

http://labs.europepmc.org/evf

A web application to assist in the identification of articles and research related to literature search terms. The search covers full text articles in the Europe PMC repository. Relevant papers are suggested to users based on the scientific term searched and the selection of questions, generated by the application, relevant to term searched.

Proper citation: EvidenceFinder (RRID:SCR_013764) Copy   

•   Source: SciCrunch Registry

http://www.cbs.dtu.dk/services/SignalP/

Web application for prediction of the presence and location of signal peptide cleavage sites in amino acid sequences from different organisms. The method incorporates a prediction of cleavage sites and a signal peptide/non-signal peptide prediction based on a combination of several artificial neural networks.

Proper citation: SignalP (RRID:SCR_015644) Copy   

•   Source: SciCrunch Registry

http://dynamine.ibsquare.be/submission/

An NMR based method for protein folding prediction. Users can enter a UniProt identifier, FASTA sequences, or upload a file containing FASTA sequences and results are returned., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

Proper citation: DynaMine (RRID:SCR_014559) Copy   

•   Source: SciCrunch Registry

https://omictools.com/3omics-tool

THIS RESOURCE IS NO LONGER IN SERVICE, documented October 19, 2016. A web tool for visualizing and integrating multiple inter- or intra-transcriptomic, proteomic, and metabolomic human data. 3Omics generates inter-omic correlation networks to visualize relationships in data with respect to time or experimental conditions for transcripts, proteins and metabolites.

Proper citation: 3Omics (RRID:SCR_014678) Copy   

•   Source: SciCrunch Registry

https://www.wyatt.com/products/instruments/microOptilab-uhplc-refractometer-sec-mals.html

Refractive Index detector that offers high sensitivity and 50 times dynamic range of every other UHPLC RI detector. Like Optilab, it offers temperature control both above and below ambient, as well as measurement of absolute refractive index of solvents.

Proper citation: Wyatt: microOptilab Refractometer (RRID:SCR_020891) Copy   

•   Source: SciCrunch Registry

https://www.wyatt.com/products/instruments/field-flow-fractionation-systems.html

Field flow fractionation device supports both Hollow Fiber Flow FFF HF5 and Asymmetric Flow FFF AF4 in one instrument. Utilizing one HPLC stack and one set of Wyatt detectors, DualTec permits automated switching between any two of SEC, AF4 and HF5 separation followed by MALS and or DLS characterization.

Proper citation: Wyatt: Eclipse DualTec Field-Flow Fractionation system (RRID:SCR_020892) Copy   

•   Source: SciCrunch Registry

https://www.wyatt.com/products/instruments/calypso-ii-label-free-biomolecular-interactions.html#calypso-3

Composition-Gradient Multi-Angle Light Scattering machine that characterizes biomolecular interactions, label free and immobolization free. It is able to determine equilibrium dissociation constants self and hhetero association as well as more complex interactions.

Proper citation: Wyatt: Calypso Composition-Gradient Multi-Angle Light Scattering (CG-MALS) (RRID:SCR_020887) Copy   

•   Source: SciCrunch Registry

https://www.waters.com/waters/promotionDetail.htm?id=10192851&locale=en_US

Mass spectrometer with selectivity, in-spectrum dynamic range, speed of analysis, quantitative accuracy and exact mass performance simultaneously, for any UPLC/MS or UPLC/MSE experiment.

Proper citation: Waters: Xevo G2 Mass Spectrometer (RRID:SCR_020885) Copy   

•   Source: SciCrunch Registry