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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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foreign Resource Report Resource Website 1+ mentions |
foreign (RRID:SCR_024025) | softwre application | Software tool for reading and writing data stored by some versions of 'Epi Info', 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', and for reading and writing some 'dBase' files. | Reading and writing data, 'Epi Info', 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', reading and writing some 'dBase' files, | is listed by: Debian | Free, Available for download, Freely available | https://sources.debian.org/src/foreign/ | SCR_024025 | r-cran-foreign | 2026-08-15 11:27:52 | 3 | ||||||||
|
Wind Integration National Dataset Toolkit Resource Report Resource Website 1+ mentions |
Wind Integration National Dataset Toolkit (RRID:SCR_023782) | WIND | data or information resource | United States national wind dataset. Provides high spatial and temporal resolution wind power, wind power forecast, and meteorological data for 7-year period at over 126,000 locations throughout continental United States. The largest publicly available wind power data set in the world. Used for wind energy integration studies. It is accessible through Web-based API. | United States, national wind dataset, wind energy integration studies, high spatial and temporal resolution wind power, wind power forecast, meteorological data, | U.S. Department of Energy | DOI:10.1016/j.apenergy.2015.03.121 | Free, Freely available | SCR_023782 | WIND Toolkit | 2026-08-15 11:27:40 | 1 | |||||||
|
Agilent: 6495 Triple Quadrupole LC/MS Resource Report Resource Website 1+ mentions |
Agilent: 6495 Triple Quadrupole LC/MS (RRID:SCR_023937) | instrument resource | Agilent 6495C triple quadrupole LC/MS system increases capacity and sensitivity for targeted quantitation applications. Used to investigate more diverse and biologically relevant groups of targeted peptides, small molecules and metabolites in single experiment without compromising sensitivity, quantitative accuracy, or linearity. | Stanford, instrument, equipment, targeted quantitation applications, targeted peptides, small molecules, metabolites | is used by: Stanford University Vincent Coates Foundation Mass Spectrometry Laboratory Core Facility | Open | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_023937.pdf | Model_Number_Agilent_6495 | SCR_023937 | Stanford Agilent 6495 Triple Quadrupole LC/MS system, Agilent 6495 Triple Quadrupole LC/MS system | 2026-08-15 11:27:51 | 1 | |||||||
|
Deepbinner Resource Report Resource Website |
Deepbinner (RRID:SCR_024001) | softwre application | Software tool for demultiplexing barcoded Oxford Nanopore sequencing reads.Signal level demultiplexer for Oxford Nanopore reads. | signal level demultiplexer, Oxford Nanopore reads, demultiplexing barcoded Oxford Nanopore sequencing reads, | is listed by: Debian | PMID:30458005 | Free, Available for download, Freely available | OMICS_30643 | https://sources.debian.org/src/deepbinner/ | SCR_024001 | deepbinner | 2026-08-15 11:27:39 | 0 | ||||||
|
Leica: Thunder Imager Live Cell system Resource Report Resource Website 10+ mentions |
Leica: Thunder Imager Live Cell system (RRID:SCR_023794) | instrument resource | Advanced widefield microscope enabling use of 3D specimens with camera based fluorescence microscopes. System ensures low phototoxicity and photobleaching, i.e., higher throughput with optimal conditions. | Leica, USEDit, microscope, camera, 3D speciment, fluorescence microscope, imaging system, | is listed by: USEDit | Restricted | SCR_023794 | , Thunder Imager, Thunder Imaging system, THUNDER Imager Live Cell, THUNDER Imager | 2026-08-15 11:27:40 | 12 | |||||||||
|
University of Lethbridge; Alberta; Canada Resource Report Resource Website |
University of Lethbridge; Alberta; Canada (RRID:SCR_023792) | university | University of Lethbridge with campuses in Lethbridge and Calgary, is one of Canada"s leading research institutions. | Canada, university, research institution | is parent organization of: University of Lethbridge Canadian Center for Hydrodynamics Core Facility | SCR_023792 | 2026-08-15 11:27:48 | 0 | |||||||||||
|
Customized Guide Cannulas Resource Report Resource Website |
Customized Guide Cannulas (RRID:SCR_023941) | instrument resource | Open source modular apparatus to produce guide cannulas exploiting 3D printing technology. Step by step procedure to realize hippocampal guide cannulas. 3D-printed guide cannula implant, as well as rotary tool based cutting station for fabrication of cannulae. Useful to conduct research in all the fields where access to brain areas is needed. | OpenBehavior, apparatus, 3D-printed guide cannula implant, produce guide cannulas, brain 3D printing, hippocampal guide cannulas, hippocampal guide cannulas procedure, neuroscience, | is listed by: OpenBehavior | PMID:36104275 | Free, Freely available | SCR_023941 | 2026-08-15 11:27:39 | 0 | |||||||||
|
Allen Mouse Brain ImageLoader Resource Report Resource Website |
Allen Mouse Brain ImageLoader (RRID:SCR_023827) | software resource | Respository contains two small software tools which render annotation and images of the Allen Mouse Brain Atlas. Both tools generate 1304 images of the Mouse Brain (456 sagital, 528 coronal and 320 axial). | Allen Mouse Brain Atlas, render annotation and images, mouse brain images, mouse brain images generation, | is related to: Allen Institute for Brain Science | Free, Available for download, Freely available | SCR_023827 | 2026-08-15 11:27:41 | 0 | ||||||||||
|
Ambulatory Monitoring: Psychomotor Vigilance Task system Resource Report Resource Website 1+ mentions |
Ambulatory Monitoring: Psychomotor Vigilance Task system (RRID:SCR_024213) | instrument resource | System includes PVT-192 monitor and REACT software. Used for reaction time testing for long-term, large-scale testing of vigilance, effects of sleep deprivation, and drug effects. Used for PVT test wherever measures of performance or sleepiness effects are needed. | Ambulatory Monitoring Inc., reaction time testing, PVT-192 monitor, REACT software, testing of vigilance, effects of sleep deprivation, drug effects, PVT test, sleepiness effects measurement, instrument, equipment | DOI:10.3758/BF03200977 | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_024213.pdf | SCR_024213 | , Psychomotor Vigilance Task, PVT-192 Psychomotor Vigilance Task Monitor | 2026-08-15 11:27:55 | 1 | ||||||||
|
CodeMeta Generator Resource Report Resource Website 1+ mentions |
CodeMeta Generator (RRID:SCR_024601) | software resource | Web application that creates CodeMeta files. | CodeMeta files, CodeMeta files creation, exchange schema for software metadata files, | has parent organization: Software Heritage | Free, Freely available | SCR_024601 | 2026-08-15 11:27:43 | 2 | ||||||||||
|
Software Heritage Resource Report Resource Website 1+ mentions |
Software Heritage (RRID:SCR_024602) | nonprofit organization | Software Heritage provides service for archiving and referencing historical and contemporary software with focus on human readable source code. The site was unveiled in 2016 by Inria and is supported by UNESCO. The project itself is structured as non‑profit multi‑stakeholder initiative. | UNESCO, Inria, archiving and referencing historical and contemporary software, | is parent organization of: CodeMeta Generator | SCR_024602 | 2026-08-15 11:27:55 | 2 | |||||||||||
|
Engineering Biology Research Consortium Resource Report Resource Website |
Engineering Biology Research Consortium (RRID:SCR_024578) | EBRC | nonprofit organization | Non-profit, public-private partnership dedicated to bringing together inclusive community committed to advancing engineering biology to address national and global needs. We showcase cutting-edge research in engineering biology, identify pressing challenges and opportunities in research and application, articulate compelling research roadmaps and programs to address them, and provide timely access to other key developments in engineering biology. | advancing engineering biology, national and global needs, engineering biology, |
is listed by: DataCite has parent organization: University of California; California; USA |
https://api.datacite.org/dois?prefix=10.25498 | SCR_024578 | The Engineering Biology Research Consortium (EBRC) | 2026-08-15 11:27:55 | 0 | ||||||||
|
Customizable Multielectrode Array Resource Report Resource Website |
Customizable Multielectrode Array (RRID:SCR_024551) | CMEA | instrument resource | Simple, lightweight, and low cost customizable multielectrode array for Local Field Potential recordings. Used to collect LFP data from different brain regions simultaneously in rats. Can be modified to record single unit and multiunit activity in addition to LFP activity using both wired and wireless neural data acquisition systems. | OpenBehavior, instrument, multielectrode array, Local Field Potential Recordings, LFP recordings, collect LFP data, brain regions LFP data, record single unit and multiunit activity, wired neural data acquisition system, wireless neural data acquisition system, explore neural activity, | is listed by: OpenBehavior | Government of Canada Natural Sciences and Engineering Research Council of Canada | Free, Freely available | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_024551.pdf | SCR_024551 | , CMEA: Customizable Multielectrode Arrays, 16-channel customizable multielectrode array | 2026-08-15 11:27:56 | 0 | ||||||
|
XDD Resource Report Resource Website |
XDD (RRID:SCR_024434) | software resource | Software digital library and cyberinfrastructure facilitating discovery and utilization of data and knowledge in published documents. | digital library and cyberinfrastructure, discovery and utilization of data and knowledge, data and knowledge in published documents, | has parent organization: University of Wisconsin-Madison; Wisconsin; USA | Free, Frely available | SCR_024434 | 2026-08-15 11:27:55 | 0 | ||||||||||
|
Tecan: Infinite M200 Resource Report Resource Website 1+ mentions |
Tecan: Infinite M200 (RRID:SCR_024560) | instrument resource | TECAN Infinite M200 is laboratory device and accessory for multiplex luminescence and fluorescence applications. Device features automated robotic arm for dispensing samples or reagents onto cuvettes or microplates, as well as range of high speed and throughput sample injection capabilities. Infinite M200 is integrated with TECAN's proven laser-based multi-channel detection technology, to measure multiple biological responses simultaneously. System features graphical user interface to configure instrument for single or multiple sample injection processes. Accommodates range of different cuvette and microplate vessels, suitable for both 1.5ml and 0.2ml tubes as well as plates up to 384 wells. Multichannel optical detector can detect up to four different signals in parallel, with wide range of detection wavelengths. Designed for high-throughput applications with sensitive fluorescence and luminescence. Features automated sample injection unit that enables hands-free operation of 96 or 1,536 up to eight-channel multipoint experiments, providing maximum flexibility. Comes with range of software, including intuitive data collection and analysis interface. Designed with automated calibration settings, providing reliable, accurate and reproducible results. | Tecan, laboratory device, multiplex luminescence and fluorescence applications, automated dispenser, sample injection, cuvettes, microplates, tubes, automated sample injection, signals detection, | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_024560.pdf | Model_Number_Infinite_M200 | SCR_024560 | TECAN Infinite M200, Infinite M200 | 2026-08-15 11:27:42 | 4 | ||||||||
|
Tecan: NanoQuantPlate Resource Report Resource Website 1+ mentions |
Tecan: NanoQuantPlate (RRID:SCR_024561) | instrument resource | Device designed for simultaneous measurement of multiple low volume samples. Consists of 16 precision manufactured quartz optics in user friendly format, offering precise, straightforward absorbance and fluorescence based measurements from sample volumes as low as 2 µl. Combined with Tecan’s Infinite series readers – the Infinite 200 PRO, Infinite F500 and Infinite M1000 PRO – the NanoQuant Plate provides solution for DNA or RNA quantification, allowing detection of concentrations down to 1 ng/µl for wide variety of applications. | Device, simultaneous measurement of multiple low volume samples, low volume samples, absorbance and fluorescence based measurements, DNA or RNA quantification, low concentration measurement, | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_024561.pdf | Model_Number_NanoQuantPlate | SCR_024561 | 2026-08-15 11:27:54 | 4 | |||||||||
|
Leica: TCS SP8 DLS LightSheet microscope Resource Report Resource Website 1+ mentions |
Leica: TCS SP8 DLS LightSheet microscope (RRID:SCR_024563) | instrument resource | Digital LightSheet full confocal with gentle single plane illumination microscope for easy light sheet imaging. TwinFlect mirror deflects illuminating light sheet at 90° angle, which allows integration of illumination and detection beam path into vertical axis of every inverted, Leica TCS SP8 confocal. | Leica, Digital LightSheet, full confocal microscope, light sheet imaging, | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_024563.pdf | SCR_024563 | Leica DLS TCS SP8 | 2026-08-15 11:27:54 | 9 | |||||||||
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Roche: Cobas C311 Resource Report Resource Website 1+ mentions |
Roche: Cobas C311 (RRID:SCR_024559) | instrument resource | Autoanalyzer is standalone system that provides consolidated testing from range of clinical chemistry applications. Allows determination of sodium, potassium and chloride in serum, plasma and urine using ion selective electrodes. Measurement of HbA1c levels in whole blood can also be performed. | Roche, autoanalyzer, chemistry applications testing, chemicals detection, HbA1c levels detection, sodium, potassium, chloride, serum, plasma, urine, whole blood, ion selective electrodes, | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_024559.pdf | Model_Number_Cobas_C311 | SCR_024559 | 2026-08-15 11:27:56 | 1 | |||||||||
|
Playbook Workflow Builder Resource Report Resource Website 1+ mentions |
Playbook Workflow Builder (RRID:SCR_024540) | web application, software resource | Web based platform that facilitates knowledge resolution by enabling users to traverse growing network of input datasets, semantically annotated API endpoints, and data visualization tools contributed by the ecosystem. Via user friendly web based user interface, workflows can be constructed from these building blocks without technical expertise. | datasets network, semantically annotated API endpoints, data visualization tools, ecosystem contributions, workflows construction, | Free, Freely available | https://github.com/nih-cfde/playbook-partnership/blob/main/docs/user/index.md | SCR_024540 | 2026-08-15 11:27:56 | 1 | ||||||||||
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Moonlight Resource Report Resource Website 1+ mentions |
Moonlight (RRID:SCR_024542) | web application, software resource | Web Luna based interactive viewer for EDF signal and annotations, specifically designed for polysomnographic data. Supports visualization, analyses and manipulation of sleep signals, range of summary statistics and hypnogram based analyses including automated staging. | interactive viewer, EDF signal and annotations, polysomnographic data visualization, sleep signals analyses and manipulation, | is related to: Luna | Free, Freely available | https://remnrem.net/app/moonlight | SCR_024542 | 2026-08-15 11:27:42 | 1 |
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