Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Tecan: NanoQuantPlate Resource Report Resource Website 1+ mentions |
Tecan: NanoQuantPlate (RRID:SCR_024561) | instrument resource | Device designed for simultaneous measurement of multiple low volume samples. Consists of 16 precision manufactured quartz optics in user friendly format, offering precise, straightforward absorbance and fluorescence based measurements from sample volumes as low as 2 µl. Combined with Tecan’s Infinite series readers – the Infinite 200 PRO, Infinite F500 and Infinite M1000 PRO – the NanoQuant Plate provides solution for DNA or RNA quantification, allowing detection of concentrations down to 1 ng/µl for wide variety of applications. | Device, simultaneous measurement of multiple low volume samples, low volume samples, absorbance and fluorescence based measurements, DNA or RNA quantification, low concentration measurement, | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_024561.pdf | Model_Number_NanoQuantPlate | SCR_024561 | 2026-08-15 11:27:54 | 4 | |||||||||
|
Leica: TCS SP8 DLS LightSheet microscope Resource Report Resource Website 1+ mentions |
Leica: TCS SP8 DLS LightSheet microscope (RRID:SCR_024563) | instrument resource | Digital LightSheet full confocal with gentle single plane illumination microscope for easy light sheet imaging. TwinFlect mirror deflects illuminating light sheet at 90° angle, which allows integration of illumination and detection beam path into vertical axis of every inverted, Leica TCS SP8 confocal. | Leica, Digital LightSheet, full confocal microscope, light sheet imaging, | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_024563.pdf | SCR_024563 | Leica DLS TCS SP8 | 2026-08-15 11:27:54 | 9 | |||||||||
|
Roche: Cobas C311 Resource Report Resource Website 1+ mentions |
Roche: Cobas C311 (RRID:SCR_024559) | instrument resource | Autoanalyzer is standalone system that provides consolidated testing from range of clinical chemistry applications. Allows determination of sodium, potassium and chloride in serum, plasma and urine using ion selective electrodes. Measurement of HbA1c levels in whole blood can also be performed. | Roche, autoanalyzer, chemistry applications testing, chemicals detection, HbA1c levels detection, sodium, potassium, chloride, serum, plasma, urine, whole blood, ion selective electrodes, | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_024559.pdf | Model_Number_Cobas_C311 | SCR_024559 | 2026-08-15 11:27:56 | 1 | |||||||||
|
Playbook Workflow Builder Resource Report Resource Website 1+ mentions |
Playbook Workflow Builder (RRID:SCR_024540) | web application, software resource | Web based platform that facilitates knowledge resolution by enabling users to traverse growing network of input datasets, semantically annotated API endpoints, and data visualization tools contributed by the ecosystem. Via user friendly web based user interface, workflows can be constructed from these building blocks without technical expertise. | datasets network, semantically annotated API endpoints, data visualization tools, ecosystem contributions, workflows construction, | Free, Freely available | https://github.com/nih-cfde/playbook-partnership/blob/main/docs/user/index.md | SCR_024540 | 2026-08-15 11:27:56 | 1 | ||||||||||
|
Moonlight Resource Report Resource Website 1+ mentions |
Moonlight (RRID:SCR_024542) | web application, software resource | Web Luna based interactive viewer for EDF signal and annotations, specifically designed for polysomnographic data. Supports visualization, analyses and manipulation of sleep signals, range of summary statistics and hypnogram based analyses including automated staging. | interactive viewer, EDF signal and annotations, polysomnographic data visualization, sleep signals analyses and manipulation, | is related to: Luna | Free, Freely available | https://remnrem.net/app/moonlight | SCR_024542 | 2026-08-15 11:27:42 | 1 | |||||||||
|
Leica: TP1020 Automatic Benchtop Tissue Processor Semi Enclosed Resource Report Resource Website 1+ mentions |
Leica: TP1020 Automatic Benchtop Tissue Processor Semi Enclosed (RRID:SCR_024535) | instrument resource | Leica TP1020 tissue processor is available in four configurations: basic instrument, basic instrument with vacuum, basic instrument with fume control system and basic instrument with both vacuum and fume control. Used for gentle specimen processing and high level of specimen safety at all stages of processing run. | tissue processor, specimen processing, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_024535.pdf | Model_Number_TP1020 | SCR_024535 | Leica TP1020 tissue processor | 2026-08-15 11:27:53 | 1 | |||||||||
|
Science-Metrix Resource Report Resource Website 1+ mentions |
Science-Metrix (RRID:SCR_024471) | commercial organization | Independent research evaluation firm, based in the U.S. and Canada. Provider of research analytics services and data. Provides science research evaluation and analytics to assess science and technology activities. Headquartered in Montréal, Canada, Science-Metrix is known for independent bibliometric analysis and research evaluation and bibliometric and informetrics expertise. Science-Metrix was an early adopter of Elsevier’s abstract database Scopus and has worked closely with Elsevier. Elsevier has acquired Science-Metrix Inc. in 2018. | Elsevier, Science-Metrix Inc., science research evaluation and analytics, assess science and technology activities, independent bibliometric analysis, | SCR_024471 | 2026-08-15 11:27:55 | 1 | ||||||||||||
|
Tosoh: AIA-900 Automated Immunoassay Analyzer Resource Report Resource Website |
Tosoh: AIA-900 Automated Immunoassay Analyzer (RRID:SCR_024473) | instrument resource | AIA immunoassay analyzer offers automation for immunoassay testing with flexible expansion capabilities. AIA-900 features: 90 tests/hour throughput; Load 10 racks on board; Load up to 5 tests/patient; First result in 18 minutes; Random access; Continuous processing; Simple touch screen operation; Bar coded primary tube sampling; Clot detection; Unit Dose Test Cup; Automated pretreatment; Automated dilution from 2 to 1000. | Tosoh Bioscience, AIA, Automated Immunoassay Analyzer, | Restricted | Model_Number_AIA-900 | SCR_024473 | 2026-08-15 11:27:51 | 0 | ||||||||||
|
CARGO Resource Report Resource Website 1+ mentions |
CARGO (RRID:SCR_024474) | web application, software resource | Web browser for analysis of proteomic data. ShinyApp interface generated in R and RStudio. | analysis of proteomic data, web browser, | Free, Freely available | SCR_024474 | Cellular Autophagy Regulation and GOlgiphagy | 2026-08-15 11:27:55 | 1 | ||||||||||
|
Planet Microbe Resource Report Resource Website 1+ mentions |
Planet Microbe (RRID:SCR_024478) | web application, software resource | Web based platform that enables data discovery from curated historical and on going oceanographic sequencing efforts. Enables discovery and integration of oceanographic ‘omics, environmental and physiochemical data layers. Used to centralize and standardize contextual data associated with major marine 'omic datasets. Used for marine microbiology to discover and analyze interconnected 'omics and environmental data. | data discovery, curated oceanographic sequencing, biological and physiochemical measurements, water samples, marine microbiology, discover and analyze interconnected 'omics and environmental data, | has parent organization: University of Arizona; Arizona; USA | NSF | PMID:32735679 | Free, Freely available | https://github.com/hurwitzlab/planet-microbe-app | SCR_024478 | 2026-08-15 11:27:41 | 2 | |||||||
|
Evosep Resource Report Resource Website 1+ mentions |
Evosep (RRID:SCR_024590) | commercial organization | Business Services and Biotechnology Research company in Odense, Denmark. | Business Services, Biotechnology company, Denmark | SCR_024590 | 2026-08-15 11:27:55 | 8 | ||||||||||||
|
Waters Resource Report Resource Website 1+ mentions |
Waters (RRID:SCR_024589) | commercial organization | Publicly traded analytical laboratory instrument and software company headquartered in Milford, Massachusetts. Leading provider of lab equipment, supplies and software. Has pioneered chromatography, mass spectrometry, and thermal analysis innovations. | analytical laboratory instrument and software company, | SCR_024589 | Waters Corporation | 2026-08-15 11:27:56 | 9 | |||||||||||
|
Noldus: Erasmus Ladder Resource Report Resource Website |
Noldus: Erasmus Ladder (RRID:SCR_024695) | instrument resource | System consists of hardware and software for assessment of motor performance and motor learning in mice. Hardware includes two goal boxes with horizontal ladder in between. Touch sensitive rungs of the ladder make it possible to measure step durations and step types. ErasmusLadder software controls experiments by sending protocol and start command to apparatus. Sessions are performed automatically, and afterwards, data is sent back to software for storage and analysis. | Noldus, motor performance and motor learning in mice assessment, | Restricted | SCR_024695 | Erasmus Ladder | 2026-08-15 11:27:57 | 0 | ||||||||||
|
brainhack.org Resource Report Resource Website 1+ mentions |
brainhack.org (RRID:SCR_000195) | brainhack.org | data or information resource, portal | Forum for collaborative projects in the field of brain science. Everyone is invited to submit projects, either existing ones that you want to see featured or new ones that you want launch and work on in a collaborative, open way. | magnetic resonance imaging assay, image, fmri, brain, science, neuroimaging, project |
is affiliated with: HBM Hackathon has parent organization: Neuro Bureau |
PMID:27042293 PMID:33932337 |
The community can contribute to this resource | nlx_149390 | SCR_000195 | BrainHack | 2026-08-15 11:28:00 | 1 | ||||||
|
Philips: FEI CM120 BioTwin Transmission Electron Microscope Resource Report Resource Website |
Philips: FEI CM120 BioTwin Transmission Electron Microscope (RRID:SCR_024709) | instrument resource | Transmission electron microscope with maximum acceleration voltage of 120 kv.Microscope primarily used for sample screening. | Microscope, Philips, FEI, instrument, Transmission Electron Microscope, sample screening, | Restricted | Model_Number_CM120 | SCR_024709 | , FEI CM120 Biotwin, FEI/PHILIPS CM120 TEM, Philips/FEI CM120 Bio Twin Transmission Electron Microscope, Philips CM120 Biotwin Lens | 2026-08-15 11:27:57 | 0 | |||||||||
|
Multitron: Incubation Shaker Resource Report Resource Website |
Multitron: Incubation Shaker (RRID:SCR_024668) | instrument resource | Shaker for cultivation of microorganisms and cell cultures provides homogeneous conditions for cultivation up to 63 liters or 23 000 batches in parallel in less than square meter of space. | Shaker, cultivation of microorganisms and cell cultures, | SCR_024668 | Multitron Standard Incubation Shaker | 2026-08-15 11:27:57 | 0 | |||||||||||
|
SPAdes Resource Report Resource Website 100+ mentions |
SPAdes (RRID:SCR_000131) | SPAdes | software toolkit, software resource | Software package for assembling single cell genomes and mini metagenomes. Uses short read sets as input. Used for genomes of uncultivatable bacteria that vastly exceeds what may be obtained via traditional metagenomics studies. Works with Illumina or IonTorrent reads and can provide hybrid assemblies using PacBio, Oxford Nanopore and Sanger reads. Intended for small genomes like bacterial or fungal., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | assembler, single, cell, small, genome, short, read, data |
is used by: shovill is listed by: OMICtools is listed by: Debian is listed by: SoftCite is related to: rnaSPAdes is related to: rnaQUAST has parent organization: Saint Petersburg Academic University; Saint Petersburg; Russia works with: Illumina: iSeq 100 Sequencing System |
Government of the Russian Federation ; NCRR P41 RR024851 |
PMID:24093227 PMID:22506599 DOI:10.1089/cmb.2012.0021 |
THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_01502 | https://sources.debian.org/src/spades/ | http://bioinf.spbau.ru/spades/ | SCR_000131 | SPAdes Genome Assembler | 2026-08-15 11:28:00 | 108 | |||
|
Emerson: Branson Digital Sonifier SFX250 Resource Report Resource Website 1+ mentions |
Emerson: Branson Digital Sonifier SFX250 (RRID:SCR_024710) | instrument resource | Branson Sonifier ultrasonic cell disruptor / homogenizers are versatile laboratory units suitable for broad range of liquid processing applications. Digital sonifier to disrupt cells, bacteria, spores, or tissue. Ideal for initiating and accelerating chemical, biochemical, and physical reactions, and for degassing liquids. Used to prepare emulsion to 0.01 micron, homogenize immiscible liquids, polymerize some materials, and depolymerize others. | Digital sonifier, Branson, instrument, sonication, sonicator, | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_024710.pdf | Model_Number_SFX250 | https://www.manualslib.com/manual/1387800/Branson-Digital-Sonifier-250.html#product-Sonifier%20450 | SCR_024710 | Branson Digital Sonifier | 2026-08-15 11:27:58 | 3 | ||||||||
|
UC Davis Library Resource Report Resource Website |
UC Davis Library (RRID:SCR_024651) | data or information resource | Collections include print and ebooks, newspapers, maps, photographs, art, historical archives, and other materials in physical and digital formats. Provides campuswide subscriptions to wide range of licensed resources, from journals and library databases to streaming media, clinical apps, and lab experiment videos. Offers access to UC collection as part of University of California. | journals, library databases, streaming media, clinical apps, lab experiment videos, |
is listed by: DataCite has parent organization: University of California; California; USA |
Free, Freely available | https://api.datacite.org/dois?prefix=10.15140 | SCR_024651 | University of California Davis Library | 2026-08-15 11:27:56 | 0 | ||||||||
|
CpGassoc Resource Report Resource Website 1+ mentions |
CpGassoc (RRID:SCR_000320) | software toolkit, software resource | Software R package to test association between methylation at CpG sites across genome and phenotype of interest, adjusting for any relevant covariates. Can perform standard analyses of large datasets without need to manually input data. Can handle mixed effects models with chip or batch entering model as random intercept. Includes tools to apply quality control filters, perform permutation tests, and create QQ plots, manhattan plots, and scatterplots for individual CpG sites. | control filters, permutation test, qq plots, manhattan plots, scatterplots, phenotype, sequence analysis software, cpg |
is listed by: OMICtools is listed by: CRAN |
PMID:22451269 | Free, Available for download, Freely available | OMICS_00793 | SCR_000320 | 2026-08-15 11:27:58 | 1 |
Can't find your Tool?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.
Welcome to the dkNET Resources search. From here you can search through a compilation of resources used by dkNET and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that dkNET has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on dkNET then you can log in from here to get additional features in dkNET such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
If you are logged into dkNET you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the facets that you can filter the data by.
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant U24DK097771.
Email: info_at_ dknet.org
