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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
https://www.tecan.com/customer-news/tecan-granted-patent-for-revolutionary-nanoquant-plate-2117
Device designed for simultaneous measurement of multiple low volume samples. Consists of 16 precision manufactured quartz optics in user friendly format, offering precise, straightforward absorbance and fluorescence based measurements from sample volumes as low as 2 µl. Combined with Tecan’s Infinite series readers – the Infinite 200 PRO, Infinite F500 and Infinite M1000 PRO – the NanoQuant Plate provides solution for DNA or RNA quantification, allowing detection of concentrations down to 1 ng/µl for wide variety of applications.
Proper citation: Tecan: NanoQuantPlate (RRID:SCR_024561) Copy
https://www.leica-microsystems.com/products/confocal-microscopes/p/leica-tcs-sp8-dls/
Digital LightSheet full confocal with gentle single plane illumination microscope for easy light sheet imaging. TwinFlect mirror deflects illuminating light sheet at 90° angle, which allows integration of illumination and detection beam path into vertical axis of every inverted, Leica TCS SP8 confocal.
Proper citation: Leica: TCS SP8 DLS LightSheet microscope (RRID:SCR_024563) Copy
https://diagnostics.roche.com/ch/de/products/instruments/cobas-c-311-ins-2043.html
Autoanalyzer is standalone system that provides consolidated testing from range of clinical chemistry applications. Allows determination of sodium, potassium and chloride in serum, plasma and urine using ion selective electrodes. Measurement of HbA1c levels in whole blood can also be performed.
Proper citation: Roche: Cobas C311 (RRID:SCR_024559) Copy
https://playbook-workflow-builder.cloud/playbooks
Web based platform that facilitates knowledge resolution by enabling users to traverse growing network of input datasets, semantically annotated API endpoints, and data visualization tools contributed by the ecosystem. Via user friendly web based user interface, workflows can be constructed from these building blocks without technical expertise.
Proper citation: Playbook Workflow Builder (RRID:SCR_024540) Copy
Web Luna based interactive viewer for EDF signal and annotations, specifically designed for polysomnographic data. Supports visualization, analyses and manipulation of sleep signals, range of summary statistics and hypnogram based analyses including automated staging.
Proper citation: Moonlight (RRID:SCR_024542) Copy
https://www.leicabiosystems.com/de-de/histologiegeraete/gewebeinfiltration/leica-tp1020/
Leica TP1020 tissue processor is available in four configurations: basic instrument, basic instrument with vacuum, basic instrument with fume control system and basic instrument with both vacuum and fume control. Used for gentle specimen processing and high level of specimen safety at all stages of processing run.
Proper citation: Leica: TP1020 Automatic Benchtop Tissue Processor Semi Enclosed (RRID:SCR_024535) Copy
https://www.science-metrix.com/
Independent research evaluation firm, based in the U.S. and Canada. Provider of research analytics services and data. Provides science research evaluation and analytics to assess science and technology activities. Headquartered in Montréal, Canada, Science-Metrix is known for independent bibliometric analysis and research evaluation and bibliometric and informetrics expertise. Science-Metrix was an early adopter of Elsevier’s abstract database Scopus and has worked closely with Elsevier. Elsevier has acquired Science-Metrix Inc. in 2018.
Proper citation: Science-Metrix (RRID:SCR_024471) Copy
https://www.diagnostics.us.tosohbioscience.com/analyzers/aia-900
AIA immunoassay analyzer offers automation for immunoassay testing with flexible expansion capabilities. AIA-900 features: 90 tests/hour throughput; Load 10 racks on board; Load up to 5 tests/patient; First result in 18 minutes; Random access; Continuous processing; Simple touch screen operation; Bar coded primary tube sampling; Clot detection; Unit Dose Test Cup; Automated pretreatment; Automated dilution from 2 to 1000.
Proper citation: Tosoh: AIA-900 Automated Immunoassay Analyzer (RRID:SCR_024473) Copy
https://harperlab.connect.hms.harvard.edu/CARGO_Cellular_Autophagy_Regulation_GOlgiphagy/
Web browser for analysis of proteomic data. ShinyApp interface generated in R and RStudio.
Proper citation: CARGO (RRID:SCR_024474) Copy
https://www.planetmicrobe.org/
Web based platform that enables data discovery from curated historical and on going oceanographic sequencing efforts. Enables discovery and integration of oceanographic ‘omics, environmental and physiochemical data layers. Used to centralize and standardize contextual data associated with major marine 'omic datasets. Used for marine microbiology to discover and analyze interconnected 'omics and environmental data.
Proper citation: Planet Microbe (RRID:SCR_024478) Copy
Business Services and Biotechnology Research company in Odense, Denmark.
Proper citation: Evosep (RRID:SCR_024590) Copy
https://www.waters.com/nextgen/us/en.html
Publicly traded analytical laboratory instrument and software company headquartered in Milford, Massachusetts. Leading provider of lab equipment, supplies and software. Has pioneered chromatography, mass spectrometry, and thermal analysis innovations.
Proper citation: Waters (RRID:SCR_024589) Copy
https://www.noldus.com/erasmusladder
System consists of hardware and software for assessment of motor performance and motor learning in mice. Hardware includes two goal boxes with horizontal ladder in between. Touch sensitive rungs of the ladder make it possible to measure step durations and step types. ErasmusLadder software controls experiments by sending protocol and start command to apparatus. Sessions are performed automatically, and afterwards, data is sent back to software for storage and analysis.
Proper citation: Noldus: Erasmus Ladder (RRID:SCR_024695) Copy
Forum for collaborative projects in the field of brain science. Everyone is invited to submit projects, either existing ones that you want to see featured or new ones that you want launch and work on in a collaborative, open way.
Proper citation: brainhack.org (RRID:SCR_000195) Copy
https://docplayer.net/37250096-Fei-philips-cm120-tem.html
Transmission electron microscope with maximum acceleration voltage of 120 kv.Microscope primarily used for sample screening.
Proper citation: Philips: FEI CM120 BioTwin Transmission Electron Microscope (RRID:SCR_024709) Copy
https://www.infors-ht.com/en/shakers/incubator-shakers/multitron-standard/
Shaker for cultivation of microorganisms and cell cultures provides homogeneous conditions for cultivation up to 63 liters or 23 000 batches in parallel in less than square meter of space.
Proper citation: Multitron: Incubation Shaker (RRID:SCR_024668) Copy
https://cab.spbu.ru/software/spades/
Software package for assembling single cell genomes and mini metagenomes. Uses short read sets as input. Used for genomes of uncultivatable bacteria that vastly exceeds what may be obtained via traditional metagenomics studies. Works with Illumina or IonTorrent reads and can provide hybrid assemblies using PacBio, Oxford Nanopore and Sanger reads. Intended for small genomes like bacterial or fungal., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.
Proper citation: SPAdes (RRID:SCR_000131) Copy
https://www.emerson.com/en-us/catalog/branson-sfx250
Branson Sonifier ultrasonic cell disruptor / homogenizers are versatile laboratory units suitable for broad range of liquid processing applications. Digital sonifier to disrupt cells, bacteria, spores, or tissue. Ideal for initiating and accelerating chemical, biochemical, and physical reactions, and for degassing liquids. Used to prepare emulsion to 0.01 micron, homogenize immiscible liquids, polymerize some materials, and depolymerize others.
Proper citation: Emerson: Branson Digital Sonifier SFX250 (RRID:SCR_024710) Copy
Collections include print and ebooks, newspapers, maps, photographs, art, historical archives, and other materials in physical and digital formats. Provides campuswide subscriptions to wide range of licensed resources, from journals and library databases to streaming media, clinical apps, and lab experiment videos. Offers access to UC collection as part of University of California.
Proper citation: UC Davis Library (RRID:SCR_024651) Copy
http://cran.r-project.org/web/packages/CpGassoc/index.html
Software R package to test association between methylation at CpG sites across genome and phenotype of interest, adjusting for any relevant covariates. Can perform standard analyses of large datasets without need to manually input data. Can handle mixed effects models with chip or batch entering model as random intercept. Includes tools to apply quality control filters, perform permutation tests, and create QQ plots, manhattan plots, and scatterplots for individual CpG sites.
Proper citation: CpGassoc (RRID:SCR_000320) Copy
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