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http://chnfoundation.org/

A non-profit organization that awards grants to a broad spectrum of charities, including those that benefit spinal cord injury efforts. The Foundation is primarily dedicated to funding extensive research, education and quality of life programs for improving the lives of people affected by spinal cord injury.

Proper citation: CRAIG H. NEILSEN FOUNDATION (RRID:SCR_014552) Copy   

•   Source: SciCrunch Registry

http://www.brainandspinalinjury.org

A center that conducts basic science and clinical research concerning spinal cord injury located at both the University of California San Francisco and the Zuckerberg San Francisco General Hospital.

Proper citation: UCSF Brain and Spinal Injury Center (UCSF-BASIC) (RRID:SCR_014553) Copy   

•   Source: SciCrunch Registry

http://enigma.ini.usc.edu/protocols/dti-protocols/

Pipeline which provides tools to extract whole-brain average and regional measurements from DTI images including FA, AD, RD and MD. Protocols for preprocessing, ENIGMA-DTI processing (skeletonization and ROI extraction), and GWAS analysis are available. Software tools used for each process are listed within the protocols.

Proper citation: ENIGMA-DTI Pipeline (RRID:SCR_014649) Copy   

•   Source: SciCrunch Registry

http://cbdm.uni-mainz.de/hippie/

Web tool used to generate confidence scored and functionally annotated human protein-protein interaction networks. Users can run a protein query using a UniProt identifier (ID or accession), gene symbol or Entrez gene id, or a network query using set fields.

Proper citation: HIPPIE (RRID:SCR_014651) Copy   

•   Source: SciCrunch Registry

https://ecocyte-us.com/

Supplier and servicer of products for expression studies in Xenopus laevis oocytes. Products include overnight delivery of freshly prepared Xenopus laevis oocytes, Cell & Tissue Media necessary during preparation, maintenance, and recording of Xenopus oocytes and lab chemicals. Services for pharmacological studies include heterologous expression and in vitro electrophysiology.

Proper citation: EcoCyte Bioscience (RRID:SCR_014773) Copy   

•   Source: SciCrunch Registry

https://www.schrodinger.com/

Commercial ogranization which provides molecular and drug discovery software and services to researchers. American software company that develops chemical simulation software for use in pharmaceutical, biotechnology, and materials science research. Provides products ranging from general molecular modeling programs to a full suite of chemical simulation and drug design software, including ligand- and structure-based methods.

Proper citation: Schrodinger (RRID:SCR_014879) Copy   

•   Source: SciCrunch Registry

http://www.eyesopen.com/oedocking

Complementary OEDocking tool for virtual screening, it performs a systematic and non-stochastic examination of all possible protein-ligand poses. The software also filters for shape complementarity and chemical feature alignment before selecting and optimizing protein-ligand poses.

Proper citation: FRED - Fast exhaustive docking (RRID:SCR_014885) Copy   

•   Source: SciCrunch Registry

http://www.lji.org

Institute dedicated to research in immunology by utilizing the academic and research communities in the La Jolla area as well as technological advances in biomedical research, imaging and analysis. Specific topics include autoimmune disease, cancer, allergies, infectious diseases and inflammation.

Proper citation: La Jolla Institute for Immunology (RRID:SCR_014845) Copy   

•   Source: SciCrunch Registry

http://www.essex.ac.uk/

A public research university in Colchester, Essex, England. The institution has degree programs that span the humanities, social sciences, and health.

Proper citation: University of Essex; England; United Kingdom (RRID:SCR_014725) Copy   

•   Source: SciCrunch Registry

http://ibrain.nuaa.edu.cn/

Brain research group affiliated with the Nanjing University of Aeronautics and Astronautics (NUAA) in China. The main research interests of iBRAIN include developing methods in machine learning, data mining, neural computation, and related areas for decoding brain functions or recognizing brain disease. Research related code and datasets can be found on the main site.

Proper citation: iBRAIN (RRID:SCR_014691) Copy   

•   Source: SciCrunch Registry

http://www.adaptivebiotech.com

Commercial organization which combines high-throughput sequencing and bioinformatics to profile T-cell and B-cell receptors.

Proper citation: Adaptive Biotechnologies (RRID:SCR_014709) Copy   

•   Source: SciCrunch Registry

https://www.ebi.ac.uk/efo/webulous/

Server used to create spreadsheets with ontology based data validations. Webulous can process populated templates and transform them into OWL/RDF using design patterns expressed in OPPL. It also has an add-on with Google spreadsheets which supports loading templates from a Webulous server and allows users to submit populated spreadsheets back to the Webulous server for transformation into OWL.

Proper citation: Webulous (RRID:SCR_014825) Copy   

•   Source: SciCrunch Registry

http://www.awmf.org/en

An association of various medical entities in Germany. The organization advises on matters and tasks of fundamental and interdisciplinary interest in medicine, develops recommendations and resolutions and represents them at the institutions occupied with such tasks, such as research strategies, education, and postgraduate training.

Proper citation: Association of the Scientific Medical Societies in Germany (RRID:SCR_014716) Copy   

•   Source: SciCrunch Registry

https://dogma.ccbb.utexas.edu/

Web-based annotation tool for plant chloroplasts and animal mitochondrial genomes. DOGMA allows the use of BLAST searches against a custom database, and conservation of basepairing in the secondary structure of animal mitochondrial tRNAs to identify and annotate genes.

Proper citation: DOGMA (RRID:SCR_015060) Copy   

•   Source: SciCrunch Registry

https://codemeta.github.io/codemeta-generator/

Web application that creates CodeMeta files.

Proper citation: CodeMeta Generator (RRID:SCR_024601) Copy   

•   Source: SciCrunch Registry

https://www.softwareheritage.org/

Software Heritage provides service for archiving and referencing historical and contemporary software with focus on human readable source code. The site was unveiled in 2016 by Inria and is supported by UNESCO. The project itself is structured as non‑profit multi‑stakeholder initiative.

Proper citation: Software Heritage (RRID:SCR_024602) Copy   

•   Source: SciCrunch Registry

https://ebrc.org/

Non-profit, public-private partnership dedicated to bringing together inclusive community committed to advancing engineering biology to address national and global needs. We showcase cutting-edge research in engineering biology, identify pressing challenges and opportunities in research and application, articulate compelling research roadmaps and programs to address them, and provide timely access to other key developments in engineering biology.

Proper citation: Engineering Biology Research Consortium (RRID:SCR_024578) Copy   

•   Source: SciCrunch Registry

https://www.eneuro.org/content/10/8/ENEURO.0212-23.2023

Simple, lightweight, and low cost customizable multielectrode array for Local Field Potential recordings. Used to collect LFP data from different brain regions simultaneously in rats. Can be modified to record single unit and multiunit activity in addition to LFP activity using both wired and wireless neural data acquisition systems.

Proper citation: Customizable Multielectrode Array (RRID:SCR_024551) Copy   

•   Source: SciCrunch Registry

https://xdd.wisc.edu/

Software digital library and cyberinfrastructure facilitating discovery and utilization of data and knowledge in published documents.

Proper citation: XDD (RRID:SCR_024434) Copy   

•   Source: SciCrunch Registry

https://de.caeonline.com/buy/lab-equipment-and-accessories/tecan-infinite-m200/9076657

TECAN Infinite M200 is laboratory device and accessory for multiplex luminescence and fluorescence applications. Device features automated robotic arm for dispensing samples or reagents onto cuvettes or microplates, as well as range of high speed and throughput sample injection capabilities. Infinite M200 is integrated with TECAN's proven laser-based multi-channel detection technology, to measure multiple biological responses simultaneously. System features graphical user interface to configure instrument for single or multiple sample injection processes. Accommodates range of different cuvette and microplate vessels, suitable for both 1.5ml and 0.2ml tubes as well as plates up to 384 wells. Multichannel optical detector can detect up to four different signals in parallel, with wide range of detection wavelengths. Designed for high-throughput applications with sensitive fluorescence and luminescence. Features automated sample injection unit that enables hands-free operation of 96 or 1,536 up to eight-channel multipoint experiments, providing maximum flexibility. Comes with range of software, including intuitive data collection and analysis interface. Designed with automated calibration settings, providing reliable, accurate and reproducible results.

Proper citation: Tecan: Infinite M200 (RRID:SCR_024560) Copy   

•   Source: SciCrunch Registry