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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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CRAIG H. NEILSEN FOUNDATION Resource Report Resource Website 10+ mentions |
CRAIG H. NEILSEN FOUNDATION (RRID:SCR_014552) | CHN | institution | A non-profit organization that awards grants to a broad spectrum of charities, including those that benefit spinal cord injury efforts. The Foundation is primarily dedicated to funding extensive research, education and quality of life programs for improving the lives of people affected by spinal cord injury. | spinal cord, Paralysis, spinal cord injury | Crossref funder ID: 100005191, grid.428355.d | https://ror.org/00k0a6x92 | SCR_014552 | CRAIG NEILSEN FOUNDATION, NEILSEN FOUNDATION | 2026-08-15 11:24:50 | 12 | ||||||||
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UCSF Brain and Spinal Injury Center (UCSF-BASIC) Resource Report Resource Website |
UCSF Brain and Spinal Injury Center (UCSF-BASIC) (RRID:SCR_014553) | group | A center that conducts basic science and clinical research concerning spinal cord injury located at both the University of California San Francisco and the Zuckerberg San Francisco General Hospital. | spinal cord injury, traumatic brain injury, paralysis, neuroprotection, regeneration, clinical trials, translational research, syndromics | SCR_014553 | 2026-08-15 11:25:06 | 0 | ||||||||||||
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ENIGMA-DTI Pipeline Resource Report Resource Website 50+ mentions |
ENIGMA-DTI Pipeline (RRID:SCR_014649) | protocol | Pipeline which provides tools to extract whole-brain average and regional measurements from DTI images including FA, AD, RD and MD. Protocols for preprocessing, ENIGMA-DTI processing (skeletonization and ROI extraction), and GWAS analysis are available. Software tools used for each process are listed within the protocols. | dti, enigma, protocol, pipeline |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: University of Southern California; Los Angeles; USA has parent organization: ENIGMA |
NIBIB U54 EB020403 | Available for download from NITRC | http://www.nitrc.org/projects/enigma_dti | SCR_014649 | ENIGMA-DTI protocol, ENIGMA DTI pipeline, ENIGMA DTI protocol | 2026-08-15 11:25:08 | 50 | |||||||
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HIPPIE Resource Report Resource Website 100+ mentions |
HIPPIE (RRID:SCR_014651) | web application, software resource | Web tool used to generate confidence scored and functionally annotated human protein-protein interaction networks. Users can run a protein query using a UniProt identifier (ID or accession), gene symbol or Entrez gene id, or a network query using set fields. | web tool, web application, protein protein interaction, reference tool, protein query, network query, human protein protein interaction network | Helmholtz Alliance in Systems Biology ; BMBF 01GS08170 |
DOI:10.1371/journal.pone.0031826 | Available on the web, Available for download, Acknowledgement requested | SCR_014651 | Human Integrated Protein Protein Interaction Reference, Human Integrated Protein-Protein Interaction rEference, Human Integrated Protein-Protein Interaction rEference (HIPPIE) | 2026-08-15 11:24:51 | 142 | ||||||||
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EcoCyte Bioscience Resource Report Resource Website 1+ mentions |
EcoCyte Bioscience (RRID:SCR_014773) | commercial organization | Supplier and servicer of products for expression studies in Xenopus laevis oocytes. Products include overnight delivery of freshly prepared Xenopus laevis oocytes, Cell & Tissue Media necessary during preparation, maintenance, and recording of Xenopus oocytes and lab chemicals. Services for pharmacological studies include heterologous expression and in vitro electrophysiology. | supplier, commercial, xenopus, xenopus laevis, laboratory equipment, oocyte, pharmacology, heterologous expression, electrophysiology | is parent organization of: Ecocyte Bioscience Xenopus laevis oocytes delivery service | SCR_014773 | 2026-08-15 11:25:10 | 6 | |||||||||||
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Schrodinger Resource Report Resource Website 500+ mentions |
Schrodinger (RRID:SCR_014879) | commercial organization | Commercial ogranization which provides molecular and drug discovery software and services to researchers. American software company that develops chemical simulation software for use in pharmaceutical, biotechnology, and materials science research. Provides products ranging from general molecular modeling programs to a full suite of chemical simulation and drug design software, including ligand- and structure-based methods. | software solution, drug discovery, small molecule, computational chemistry |
is parent organization of: Epik is parent organization of: Ligprep is parent organization of: Glide is parent organization of: Phase is parent organization of: MacroModel is parent organization of: Maestro is parent organization of: Protein preparation Wizard is parent organization of: Shape screening |
Wikidata: Q7432923, ISNI: 0000 0001 0903 5603, grid.421925.9, SCR_014879 | https://ror.org/05a3z6914 | SCR_014879 | Schrodinger Inc. | 2026-08-15 11:24:54 | 840 | ||||||||
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FRED - Fast exhaustive docking Resource Report Resource Website 1+ mentions |
FRED - Fast exhaustive docking (RRID:SCR_014885) | FRED | software resource | Complementary OEDocking tool for virtual screening, it performs a systematic and non-stochastic examination of all possible protein-ligand poses. The software also filters for shape complementarity and chemical feature alignment before selecting and optimizing protein-ligand poses. | docking, protein ligand, protein-ligand, protein ligand interaction, protein-ligand interaction, protein ligand pose, protein-ligand pose, ultra high throughput, compliment | http://docs.eyesopen.com/oedocking/fred.html | SCR_014885 | Fast exhaustive docking (FRED), Fast exhaustive docking | 2026-08-15 11:24:54 | 1 | |||||||||
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La Jolla Institute for Immunology Resource Report Resource Website 1+ mentions |
La Jolla Institute for Immunology (RRID:SCR_014845) | institution | Institute dedicated to research in immunology by utilizing the academic and research communities in the La Jolla area as well as technological advances in biomedical research, imaging and analysis. Specific topics include autoimmune disease, cancer, allergies, infectious diseases and inflammation. | la jolla, allergy, immunology, biomedical, research, autoimmune disease, cancer, allergy, infectious disease, inflammation |
is parent organization of: La Jolla Institute for Immunology Clinical Studies Core Facility is parent organization of: La Jolla Institute for Immunology Bioinformatics Core Facility is parent organization of: La Jolla Institute for Immunology Microscopy and Histology Core Facility is parent organization of: La Jolla Institute for Immunology Flow Cytometry Core Facility |
, Wikidata Q6463245, ISNI 0000 0004 0461 3162, GRID grid.185006.a | https://ror.org/05vkpd318 | SCR_014845 | 2026-08-15 11:24:53 | 3 | |||||||||
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University of Essex; England; United Kingdom Resource Report Resource Website 1+ mentions |
University of Essex; England; United Kingdom (RRID:SCR_014725) | university | A public research university in Colchester, Essex, England. The institution has degree programs that span the humanities, social sciences, and health. | university, public, research, humanities, social sciences, health, england, british | ISNI:0000 0001 0942 6946, Wikidata:Q1075104, grid.8356.8, Crossref funder ID:100010046 | https://ror.org/02nkf1q06 | SCR_014725 | 2026-08-15 11:25:09 | 2 | ||||||||||
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iBRAIN Resource Report Resource Website 1+ mentions |
iBRAIN (RRID:SCR_014691) | group | Brain research group affiliated with the Nanjing University of Aeronautics and Astronautics (NUAA) in China. The main research interests of iBRAIN include developing methods in machine learning, data mining, neural computation, and related areas for decoding brain functions or recognizing brain disease. Research related code and datasets can be found on the main site. | brain, human brain, brain disease, brain research, group, brain research group, machine learning, data mining, neural computation | Brain disease | Public | SCR_014691 | Intelligence BRain Analysis through Images and Networks (iBRAIN), Intelligence BRain Analysis through Images and Networks, Intelligence Brain Analysis Through Images and Networks | 2026-08-15 11:25:10 | 6 | |||||||||
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Adaptive Biotechnologies Resource Report Resource Website 10+ mentions |
Adaptive Biotechnologies (RRID:SCR_014709) | resource | Commercial organization which combines high-throughput sequencing and bioinformatics to profile T-cell and B-cell receptors. | high throughput, sequencing, bioinformatics, t cell, b cell, biotechnology | Commercially available | SCR_014709 | 2026-08-15 11:24:52 | 24 | |||||||||||
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Webulous Resource Report Resource Website 1+ mentions |
Webulous (RRID:SCR_014825) | web application, software resource | Server used to create spreadsheets with ontology based data validations. Webulous can process populated templates and transform them into OWL/RDF using design patterns expressed in OPPL. It also has an add-on with Google spreadsheets which supports loading templates from a Webulous server and allows users to submit populated spreadsheets back to the Webulous server for transformation into OWL. | server, ontology, data validation, owl, spreadsheet | Available for installation | SCR_014825 | 2026-08-15 11:24:53 | 2 | |||||||||||
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Association of the Scientific Medical Societies in Germany Resource Report Resource Website |
Association of the Scientific Medical Societies in Germany (RRID:SCR_014716) | AWMF | group | An association of various medical entities in Germany. The organization advises on matters and tasks of fundamental and interdisciplinary interest in medicine, develops recommendations and resolutions and represents them at the institutions occupied with such tasks, such as research strategies, education, and postgraduate training. | germany, medicine, interdisciplinary, research | SCR_014716 | Arbeitsgemeinschaft der Wissenschaftlichen Medizinischen Fachgesellschaften | 2026-08-15 11:25:08 | 0 | ||||||||||
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DOGMA Resource Report Resource Website 100+ mentions |
DOGMA (RRID:SCR_015060) | web application, software resource | Web-based annotation tool for plant chloroplasts and animal mitochondrial genomes. DOGMA allows the use of BLAST searches against a custom database, and conservation of basepairing in the secondary structure of animal mitochondrial tRNAs to identify and annotate genes. | chloroplast, mitochondria, genome annotation, bio.tools, FASEB list |
is listed by: bio.tools is listed by: Debian |
PMID:15180927 | Freely available | biotools:DOGMA | https://bio.tools/DOGMA | SCR_015060 | Dual Organellar GenoMe Annotator, Dual Organellar GenoMe Annotator (DOGMA) | 2026-08-15 11:24:57 | 428 | ||||||
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CodeMeta Generator Resource Report Resource Website 1+ mentions |
CodeMeta Generator (RRID:SCR_024601) | software resource | Web application that creates CodeMeta files. | CodeMeta files, CodeMeta files creation, exchange schema for software metadata files, | has parent organization: Software Heritage | Free, Freely available | SCR_024601 | 2026-08-15 11:27:43 | 2 | ||||||||||
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Software Heritage Resource Report Resource Website 1+ mentions |
Software Heritage (RRID:SCR_024602) | nonprofit organization | Software Heritage provides service for archiving and referencing historical and contemporary software with focus on human readable source code. The site was unveiled in 2016 by Inria and is supported by UNESCO. The project itself is structured as non‑profit multi‑stakeholder initiative. | UNESCO, Inria, archiving and referencing historical and contemporary software, | is parent organization of: CodeMeta Generator | SCR_024602 | 2026-08-15 11:27:55 | 2 | |||||||||||
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Engineering Biology Research Consortium Resource Report Resource Website |
Engineering Biology Research Consortium (RRID:SCR_024578) | EBRC | nonprofit organization | Non-profit, public-private partnership dedicated to bringing together inclusive community committed to advancing engineering biology to address national and global needs. We showcase cutting-edge research in engineering biology, identify pressing challenges and opportunities in research and application, articulate compelling research roadmaps and programs to address them, and provide timely access to other key developments in engineering biology. | advancing engineering biology, national and global needs, engineering biology, |
is listed by: DataCite has parent organization: University of California; California; USA |
https://api.datacite.org/dois?prefix=10.25498 | SCR_024578 | The Engineering Biology Research Consortium (EBRC) | 2026-08-15 11:27:55 | 0 | ||||||||
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Customizable Multielectrode Array Resource Report Resource Website |
Customizable Multielectrode Array (RRID:SCR_024551) | CMEA | instrument resource | Simple, lightweight, and low cost customizable multielectrode array for Local Field Potential recordings. Used to collect LFP data from different brain regions simultaneously in rats. Can be modified to record single unit and multiunit activity in addition to LFP activity using both wired and wireless neural data acquisition systems. | OpenBehavior, instrument, multielectrode array, Local Field Potential Recordings, LFP recordings, collect LFP data, brain regions LFP data, record single unit and multiunit activity, wired neural data acquisition system, wireless neural data acquisition system, explore neural activity, | is listed by: OpenBehavior | Government of Canada Natural Sciences and Engineering Research Council of Canada | Free, Freely available | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_024551.pdf | SCR_024551 | , CMEA: Customizable Multielectrode Arrays, 16-channel customizable multielectrode array | 2026-08-15 11:27:56 | 0 | ||||||
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XDD Resource Report Resource Website |
XDD (RRID:SCR_024434) | software resource | Software digital library and cyberinfrastructure facilitating discovery and utilization of data and knowledge in published documents. | digital library and cyberinfrastructure, discovery and utilization of data and knowledge, data and knowledge in published documents, | has parent organization: University of Wisconsin-Madison; Wisconsin; USA | Free, Frely available | SCR_024434 | 2026-08-15 11:27:55 | 0 | ||||||||||
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Tecan: Infinite M200 Resource Report Resource Website 1+ mentions |
Tecan: Infinite M200 (RRID:SCR_024560) | instrument resource | TECAN Infinite M200 is laboratory device and accessory for multiplex luminescence and fluorescence applications. Device features automated robotic arm for dispensing samples or reagents onto cuvettes or microplates, as well as range of high speed and throughput sample injection capabilities. Infinite M200 is integrated with TECAN's proven laser-based multi-channel detection technology, to measure multiple biological responses simultaneously. System features graphical user interface to configure instrument for single or multiple sample injection processes. Accommodates range of different cuvette and microplate vessels, suitable for both 1.5ml and 0.2ml tubes as well as plates up to 384 wells. Multichannel optical detector can detect up to four different signals in parallel, with wide range of detection wavelengths. Designed for high-throughput applications with sensitive fluorescence and luminescence. Features automated sample injection unit that enables hands-free operation of 96 or 1,536 up to eight-channel multipoint experiments, providing maximum flexibility. Comes with range of software, including intuitive data collection and analysis interface. Designed with automated calibration settings, providing reliable, accurate and reproducible results. | Tecan, laboratory device, multiplex luminescence and fluorescence applications, automated dispenser, sample injection, cuvettes, microplates, tubes, automated sample injection, signals detection, | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_024560.pdf | Model_Number_Infinite_M200 | SCR_024560 | TECAN Infinite M200, Infinite M200 | 2026-08-15 11:27:42 | 4 |
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The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant U24DK097771.
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