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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Sciblogs
 
Resource Report
Resource Website
Sciblogs (RRID:SCR_005219) Sciblogs blog, data or information resource, narrative resource Sciblogs brings together the best science bloggers in the country (New Zealand) on one website, creating a hub for scientific analysis and discussion and facilitating reader interaction. The website is for scientists who want to reach out to a general audience to explain their science and how it relates to society. Some Sciblog contributors spend most of their time in the lab or buried in research. Others are authors or entrepreneurs. All of them know what they are talking about and have an interest in engaging in discussion on the big science-related issues facing society. Over time more bloggers will be added to the Sciblogs roster. If you would like to inquire about hosting a blog on Sciblogs contact us. You can easily keep an eye on new Sciblogs posts by subscribing via RSS or email or by following our Twitter feed. Alternatively, there is a Facebook page as well as a Facebook group feel free to join in! Categories: * Science * Agriculture * Technology * Health and Medicine * Environment and Ecology * Science and Society science, technology, new zealand, clinical health, climate change, clinical, health, agriculture, society, medicine, environment, ecology is used by: NIF Data Federation
is used by: Integrated Blogs
Advertising revenue ;
AMP Scholarship grant
Content is property of author and Science Media Centre. Permission for use required or under the terms of fair use of copyright or Creative Commons licensing (indicated prominently on each blog adopting it.) nlx_144223 SCR_005219 SciBlogs.co.nz 2026-09-05 06:31:28 0
RetractionWatch.com
 
Resource Report
Resource Website
1+ mentions
RetractionWatch.com (RRID:SCR_000654) blog, data or information resource, narrative resource Retraction Watch is a blog of retractions in the scientific literature. It is maintained by Adam Marcus and Ivan Oransky and has been operating since August 2010. literature, retraction, bibliographic, database, blog is used by: NIF Data Federation
is used by: Integrated Blogs
nif-0000-06675 SCR_000654 retractionwatch, Retraction Watch 2026-09-05 06:31:11 4
BAMS Connectivity
 
Resource Report
Resource Website
1+ mentions
BAMS Connectivity (RRID:SCR_000561) data or information resource, database THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 9,2022. Database of information about brain region circuitry, it collates data from the literature on tract tracing studies and provides tools for analysis and visualization of connectivity between brain regions., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. brain, neural circuitry, connectivity, brain region, neuroanatomy, neuronal tract tracing, connectome is used by: NIF Data Federation
is related to: Integrated Manually Extracted Annotation
has parent organization: Brain Architecture Management System
THIS RESOURCE IS NO LONGER IN SERVICE nlx_144138 http://brancusi.usc.edu/bkms/, http://brancusi.usc.edu/ SCR_000561 Brain Architecture Management System Connectivity Data 2026-09-05 06:31:10 1
H2SO4Hurts
 
Resource Report
Resource Website
H2SO4Hurts (RRID:SCR_000686) H2SO4Hurts blog, data or information resource, narrative resource Blog about technology, molecular biology, and editorial comments on the current state of science on the internet. Brian Krueger PhD, is the owner, creator and coder of LabSpaces by night and a Molecular biologist by day. His posts are presented as opinion and commentary and do not represent the views of LabSpaces Productions, LLC, his employer, or his educational institution. hhv8, kaposi sarcoma herpes virus, micrornas, molecular genetics, microbiology, science is used by: NIF Data Federation
has parent organization: LabSpaces
THIS RESOURCE IS NO LONGER IN SERVICE nlx_144220 SCR_000686 H2SO4 Hurts: And Other Pearls of Science Wisdom, H2SO4 Hurts - Brian Krueger PhD, H2SO4Hurts - Brian Krueger PhD 2026-09-05 06:31:11 0
Lifespan Observations Database
 
Resource Report
Resource Website
1+ mentions
Lifespan Observations Database (RRID:SCR_001609) Lifespan Observations Database data or information resource, database Database that collects published lifespan data across multiple species. The entire database is available for download in various formats including XML, YAML and CSV. lifespan, phenotype, intervention, gene, compound, publication is used by: NIF Data Federation
is used by: Aging Portal
is related to: MONARCH Initiative
has parent organization: Sageweb
Aging THIS RESOURCE IS NO LONGER IN SERVICE nlx_153873 http://sageweb.org/lifespandb SCR_001609 Sageweb Lifespan Observation Database 2026-09-05 06:31:14 1
PLoS Blogs
 
Resource Report
Resource Website
1+ mentions
PLoS Blogs (RRID:SCR_001371) PLoS Blogs blog, data or information resource, narrative resource PLoS Blogs has been set up to bring a select group of independent science and medicine bloggers together with the editors and staff who run our blogs. Our independent network is made up of writers who love science and medicine, and scientists and physicians that love to write. Here, you'll find an equal mix of blogs from journalists and researchers tackling diverse issues in science and medicine. There are three very distinct types of blogs on the PLoS Blogs network: the official PLoS blog, the PLoS journal blogs (collectively known as The PLoS Blogs), and blogs from the independent network (a.k.a. The PLoS Blogosphere) # The official PLoS blog: This content is produced, edited, and/or maintained by PLoS staff. # The journal blogs: This content is produced, edited, and/or maintained by PLoS journal staff: The current journal blogs are Speaking of Medicine (PLoS Medicine's blog) and everyONE (PLoS ONE's blog). # Our independent network of bloggers (The PLoS Blogosphere): This content is produced, edited, and/or maintained by the authors. * All of the content in The PLoS Blogosphere came from the minds of the authors. PLoS does not screen, edit, or otherwise meddle with content on the these blogs in any way. Our bloggers and our users are held to exactly the same standards, and the community guidelines apply to everyone that uses our site. If a blogger has posted content that you believe violates our site abuse policy, please contact PLoS. * Bloggers monitor their own comment threads: All comments will be reviewed by the author of the blog where you leave your thoughts. Just follow our simple community guidelines and we'll all get along just fine. science, medicine, health is used by: NIF Data Federation
is used by: Integrated Blogs
is parent organization of: NeuroTribes
is parent organization of: Wordpress ePub Plugin
Creative Commons Attribution License, 1 has restrictions - see bottom of blogs and abide by restrictions nif-0000-07759 SCR_001371 Public Library of Science - Science Blog Network, PLoS Blogs Network, Public Library of Science Blogs 2026-09-05 06:31:13 2
Integrated Models
 
Resource Report
Resource Website
Integrated Models (RRID:SCR_001481) Integrated Models data or information resource, database A virtual database of several model resources including: CellML Model Repository, ModelDB, Open Source Brain, SimTK, and ModelRun. model, integrated, database, nif is used by: NIF Data Federation
lists: Simtk.org
lists: ModelDB
lists: Open Source Brain
lists: CellML Model Repository
has parent organization: Integrated
Free, Freely available nlx_152726 https://legacy.neuinfo.org/mynif/search.php?q=*&t=indexable&list=cover&nif=nlx_154697-12 https://neuinfo.org/mynif/search.php?q=*&t=indexable&nif=nlx_152726-1, https://neuinfo.org/mynif/search.php?q=*&t=indexable&list=cover&nif=nlx_154697-12 SCR_001481 Integrated Model View, NIF Integrated Models, NIF Models, NIF Integrated Models View, Integrated Model, NIF Integrated Model 2026-09-05 06:31:14 0
Diabetic Complications Consortium
 
Resource Report
Resource Website
100+ mentions
Diabetic Complications Consortium (RRID:SCR_001415) DiaComp biomaterial supply resource, material resource, tissue bank Consortium serving the diabetic complications community that sponsors annual meetings in complications-relevant scientific areas, solicits and funds pilot projects in high impact areas of complications research, and provides resources and data including animal models, protocols and methods, validation criteria, reagents and resources, histology, publications and bioinformatics for researchers conducting diabetic complications research. diabetes, antibody, animal model, assay, experiment, histology, protocol, strain, phenotype, metabolic, cardiovascular, image, data set, community building portal, consortium, FASEB list is used by: NIF Data Federation
is used by: NIDDK Information Network (dkNET)
is listed by: NIDDK Information Network (dkNET)
is listed by: One Mind Biospecimen Bank Listing
is related to: dkCOIN
has parent organization: Augusta University; Georgia; USA
Diabetes, Diabetic complication, Nephropathy, Neuropathy, Retinopathy, Wound healing, Cardiomyopathy, Uropathy NIDDK ;
JDRF
Free, Freely Available nlx_152636 http://www.amdcc.org/ SCR_001415 Animal Models of Diabetic Complications Consortium, AMDCC 2026-09-05 06:31:13 237
WikiPathways
 
Resource Report
Resource Website
1000+ mentions
WikiPathways (RRID:SCR_002134) data or information resource, database, service resource Open and collaborative platform dedicated to curation of biological pathways. Each pathway has dedicated wiki page, displaying current diagram, description, references, download options, version history, and component gene and protein lists. Database of biological pathways maintained by and for scientific community. database, knowledge environment resource, image, web service, biological pathway, diagram description, reference, pathway, FASEB list is used by: NIF Data Federation
is used by: Open PHACTS
is related to: PharmGKB
is related to: Reactome
is related to: NetPath
is related to: ConsensusPathDB
is related to: NCBI BioSystems Database
is related to: WebGestalt: WEB-based GEne SeT AnaLysis Toolkit
has parent organization: University of California at San Francisco; California; USA
has parent organization: Maastricht University; Maastricht; Netherlands
Google Summer of Code program ;
Netherlands Bioinformatics Centre ;
NIGMS GM080223;
NIGMS R01 GM100039;
NIH ;
NWO - Netherlands Organization for Scientific Research
PMID:22096230
PMID:18651794
Free, Freely available nif-0000-20925, r3d100013316 SCR_002134 Wiki Pathways 2026-09-05 06:31:16 2013
Integrated
 
Resource Report
Resource Website
10+ mentions
Integrated (RRID:SCR_002187) data or information resource, database Virtual database of individual data sources, maintained by SciCrunch participating groups. Database topics are varied, including animals, grants, software, brain gene expression, and clinical trials. database aggregation, integrated scicrunch view is used by: NIF Data Federation
has parent organization: Neuroscience Information Framework
has parent organization: NeuroLex
has parent organization: SciCrunch
is parent organization of: Integrated Animals
is parent organization of: Integrated Models
is parent organization of: Integrated Grants
is parent organization of: Integrated Videos
is parent organization of: Integrated Brain Gene Expression
is parent organization of: Integrated Software
is parent organization of: Integrated Disease
is parent organization of: Integrated Podcasts
is parent organization of: Integrated Jobs
is parent organization of: Integrated Blogs
is parent organization of: Integrated Auto-Extracted Annotation
is parent organization of: Integrated Clinical Trials
is parent organization of: Integrated Gene-Disease Interaction
is parent organization of: Integrated Nervous System Connectivity
is parent organization of: Integrated Manually Extracted Annotation
is parent organization of: Integrated Cell Lines
is parent organization of: Integrated Snippets
is parent organization of: Integrated Datasets
Free, Freely available nlx_154697 http://neurolex.org/wiki/Category:Resource:Integrated SCR_002187 Integrated through SciCrunch, SciCrunch Integrated 2026-09-05 06:31:16 15
Internet Brain Volume Database
 
Resource Report
Resource Website
1+ mentions
Internet Brain Volume Database (RRID:SCR_002060) IBVD data or information resource, database A database of brain neuroanatomic volumetric observations spanning various species, diagnoses, and structures for both individual and group results. A major thrust effort is to enable electronic access to the results that exist in the published literature. Currently, there is quite limited electronic or searchable methods for the data observations that are contained in publications. This effort will facilitate the dissemination of volumetric observations by making a more complete corpus of volumetric observations findable to the neuroscience researcher. This also enhances the ability to perform comparative and integrative studies, as well as metaanalysis. Extensions that permit pre-published, non-published and other representation are planned, again to facilitate comparative analyses. Design strategy: The principle organizing data structure is the "publication". Publications report on "groups" of subjects. These groups have "demographic" information as well as "volume" information for the group as a whole. Groups are comprised of "individuals", which also have demographic and volume information for each of the individuals. The finest-grained data structure is the "individual volume record" which contains a volume observation, the units for the observation, and a pointer to the demographic record for individual upon which the observation is derived. A collection of individual volumes can be grouped into a "group volume" observation; the group can be demographically characterized by the distribution of individual demographic observations for the members of the group. anatomy, volume, dsm-iv, normal, schizophrenia, autistic disorder, bipolar disorder, major depressive disorder, alzheimer's disease, attention deficit-hyperactivity disorder, alcohol dependence, dementia, traumatic brain injury, borderline personality disorder, obsessive-compulsive disorder, asperger syndrome, brain, brain structure, in vivo, ex vivo, male, female, gorilla beringei beringei, pongo pygmaeus, volumetric analysis is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
is related to: NIF Data Federation
is related to: Integrated Manually Extracted Annotation
has parent organization: Harvard Medical School; Massachusetts; USA
Normal, Alzheimers disease, Seizure, Complex febrile seizure, Holoprosencephaly, Alcohol dependence, Bipolar Disorder, Traumatic brain injury, Schizophrenia The Human Brain Project ;
NINDS NS034189
PMID:21931990 Free, Available for download, Freely available nif-0000-00033 http://www.nitrc.org/projects/ibvd http://www.cma.mgh.harvard.edu/ibvd/ SCR_002060 2026-09-05 06:31:15 4
Retina Project
 
Resource Report
Resource Website
1+ mentions
Retina Project (RRID:SCR_002884) Retina Project atlas, data or information resource, spatially referenced dataset Collection of images from cell type-specific protein expression in retina using BAC transgenic mice. Images from cell type-specific protein expression in retina using BAC transgenic mice from GENSAT project. electrophysiology, protein expression, fluorescent, gene, amacrine cell, astrocyte, bipolar cell, blood vessel, brain, cell, ganglion cell layer, central nervous system, circuit, horizontal cell, hybridization, microglia, adult mouse, muller cell, neocortex, neuronal, photoreceptor, protein, recombinase, retina, spinal cord, mutant mouse strain, bac, retinal cell, cell type, night vision, direction, neuronal circuitry, connectivity, image collection is used by: NIF Data Federation
has parent organization: GENSAT at NCBI - Gene Expression Nervous System Atlas
Department Of Health And Human Services ;
NINDS N01 NS02331
PMID:19648912 Free, Freely available nif-0000-25587 SCR_002884 GENSAT Retina Project, Retina Project from GENSAT, The Retina Project, The Retina Project from GENSAT, GENSAT - Retina Project 2026-09-05 06:31:19 2
Mendelspod
 
Resource Report
Resource Website
Mendelspod (RRID:SCR_009027) Mendelspod blog, data or information resource, narrative resource, podcast A collection of content, including podcasts and blogs, to advance life science research, connecting people and ideas in the life sciences. Mendelspod creates a space for probing conversations and deep insight into the topics and trends which shape the industry''s future and therefore our future as a species. The podcasts are engaging, thoughtful thirty minute shows twice a week on highly relevant topics to those working around the life sciences. Their format enables them to go in depth with scientists who are leaders in their field, or CEOs of high growth companies to explore trends and the latest technologies. At Mendelspod, they offer a front row seat to the revolution going on in biology, putting a human face on some complicated, highly technical topics. Here you can tune in to hear Steve Burrill give his ''state of the industry'' overview, or listen to George Church talk about art and science, or find out how the latest developments in NGS are helping in the war on cancer. The blogs cover the latest trends and products, and can be entertaining. Guest bloggers featured and welcomed. genomics, personalized medicine, syn bio, biotech, pharma, health, life science, consulting, community building portal is used by: NIF Data Federation
is used by: Integrated Blogs
Protected by copyright, For personal, Non-commercial, Use, Or with written permission, Copyright notice must be retained nlx_153912 SCR_009027 Mendelspod.com 2026-09-05 06:30:02 0
Drug Design Data Resource
 
Resource Report
Resource Website
1+ mentions
Drug Design Data Resource (RRID:SCR_000497) D3R data or information resource, database, portal Project portal's database of protein-ligand data sets provided by pharmaceutical partners that provide atomic details of drug mechanisms that will be used to improve computer-aided drug-design methods and thus accelerate drug discovery. The project aims to help companies release the high-quality data they have generated, which has incredible value to researchers working to improve methods of computer-aided drug discovery. Everyone stands to benefit from the ability to develop new medications more quickly and inexpensively. What computational chemists globally are trying to do is to make faster, more accurate, more predictive programs to speed up the process. Part of their mission is to engage the community in these challenges to test newly developed predictive algorithms. computer-aided drug design, drug design, pharmaceutical, small molecule, ligand-protein interaction, protein, ligand, drug development, drug, binding, data set, affinity, computation, medicine, compound, structure uses: Binding MOAD
uses: Protein Data Bank Bind Database
is used by: NIF Data Federation
is listed by: DataCite
has parent organization: University of California at San Diego; California; USA
has parent organization: University of California; California; USA
NIGMS 1U01GM111528 nlx_158375 https://api.datacite.org/dois?prefix=10.15782 SCR_000497 Drug Design Data (D3R) Resource 2026-09-05 06:30:35 3
NINDS Disorder Index
 
Resource Report
Resource Website
NINDS Disorder Index (RRID:SCR_000433) NINDS Disorder Index, NINDS Disorder List data or information resource, data set Reference disease data set of neurological diseases along with their definitions, etiology, treatment, prognosis, ongoing research, clinical trials information and publications. The Disorder Index includes synonyms and research topics. Navigation is by letter of the alphabet., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. genetic disorder, disease, disease progression, disorder, neurological disease, bibliography, clinical is used by: NIF Data Federation
is related to: Integrated Disease
has parent organization: National Institute of Neurological Disorders and Stroke
THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-23200 SCR_000433 NINDS Disease List, Disorder Index: National Institute of Neurological Disorders and Stroke (NINDS), Disorders index from the National Institute of Neurological Disorders and Stroke (NINDS), NINDS Disorders A - Z, National Institute of Neurological Disorders and Stroke Disorder Index 2026-09-05 06:33:19 0
Lady Scientist
 
Resource Report
Resource Website
Lady Scientist (RRID:SCR_000567) Lady Scientist blog, data or information resource, narrative resource Lady Scientist chronicles the author's journey through grad school and navigating the so-called Two Body Problem. The author, Amanda (at) Lady Scientist, is a recent Ph.D. graduate in biochemistry and molecular biology. scientist, motherhood, breastfeeding, mother, daycare, biochemistry, molecular biology is used by: NIF Data Federation
is used by: Integrated Blogs
has parent organization: LabSpaces
THIS RESOURCE IS NO LONGER IN SERVICE nlx_144218 SCR_000567 2026-09-05 06:33:19 0
Temporal-Lobe: Hippocampal - Parahippocampal Neuroanatomy of the Rat
 
Resource Report
Resource Website
1+ mentions
Temporal-Lobe: Hippocampal - Parahippocampal Neuroanatomy of the Rat (RRID:SCR_002816) Temporal-lobe.com data or information resource, data set Interactive diagram containing existing knowledge of hippocampal-parahippocampal connections in which any connection can be turned on or off at the level of cortical layers. It includes references for each connection. function, anatomical, connection, cortical, diagram, hippocampus, layer, neuroanatomy, neuroscience, parahippocampal, projection, subfield, temporal, lobe, topological, connectome, magnetic resonance, connectivity, formation, parahippocampal region, retrosplenial cortex, tract tracing is used by: NIF Data Federation
is used by: Integrated Nervous System Connectivity
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
is related to: Rat Hippocampus Atlas
is related to: Integrated Manually Extracted Annotation
has parent organization: Norwegian University of Science and Technology; Trondheim; Norway
Research Council of Norway ;
various independent donations
PMID:21847380
PMID:19300446
Freely available, Account required nif-0000-24805 http://www.nitrc.org/projects/connectivity SCR_002816 Parahippocampal-hippocampal network, TEMPORAL-LOBE, Parahippocampal hippocampal connectivity 2026-09-05 06:33:23 7
Mouse Genome Informatics Transgenes
 
Resource Report
Resource Website
1+ mentions
Mouse Genome Informatics Transgenes (RRID:SCR_003468) MGI Transgene data or information resource, data set Data set of collected and annotated expression and activity data for recombinase-containing transgenes and knock-in alleles. As the authoritative source of official names for mouse genes, alleles, and strains, MGI makes this list of transgenes available as a service and includes all known transgenes and synonyms. NIF provides a database interface so that researchers may have a better idea whether the trangene or transgenic animal that they are searching for is available.
Nomenclature follows the rules and guidelines established by the International Committee on Standardized Genetic Nomenclature for Mice.
transgene, allele, phenotype is used by: NIF Data Federation
is related to: Integrated Manually Extracted Annotation
has parent organization: Mouse Genome Informatics (MGI)
Acknowledgement requested, Non-commercial, Commercial with permission, Copyrighted nif-0000-34000 SCR_003468 2026-09-05 06:33:24 3
Integrated Auto-Extracted Annotation
 
Resource Report
Resource Website
Integrated Auto-Extracted Annotation (RRID:SCR_005892) Integrated AEA, Auto-Extracted Annotation data or information resource, data set A virtual database that indexes both BioNOT for negation data, and the Resource Discovery Pipeline: an automated resource discovery and semi-automated type characterization with text-mining scripts that facilitate curation team efforts to discover, integrate and display new content. This virtual database currently indexes the following resources: * BioNOT, http://snake.ims.uwm.edu/bionot/index.php?searchterm=mecp2+autism&submit=Search * Resource Discovery Pipeline, http://lucene1.neuinfo.org/nif_resource/current/ annotation, negative data is used by: NIF Data Federation
is related to: BioNOT
is related to: NIF Registry Automated Crawl Data
is related to: PubMed
has parent organization: Integrated
NIH Blueprint for Neuroscience Research ;
NIDA Contract HHSN271200577531C
PMID:22434839 Data are licensed by their respective owners. Use and distribution is subject to the Terms of Use by the original resource as well as the, Creative Commons Attribution License nlx_149462 http://neuinfo.org/nif/nifgwt.html?query=nlx_149462 SCR_005892 NIF Integrated Automatically Extracted Annotation, NIF Integrated Auto. Extracted Annotation, NIF Integrated Auto-Extracted Annotation, Integrated Automatically Extracted Annotation, Integrated Auto Extracted Annotation, NIF Auto-Extracted Annotation 2026-09-05 06:33:26 0
Kawasaki Disease Dataset2
 
Resource Report
Resource Website
Kawasaki Disease Dataset2 (RRID:SCR_008839) KD Data data or information resource, data set Dataset from an investigation of biochemical evidence of myocardial strain, oxidative stress, and cardiomyocyte injury in 55 acute KD subjects (30 with paired convalescent samples), 54 febrile control (FC), and 50 healthy control (HC) children by measuring concentrations of cardiovascular biomarkers. NT-proBNP and sST2 were elevated in acute KD subjects and correlated with impaired myocardial relaxation. These findings, combined with elevated levels of cTnI, suggest that both cardiomyocyte stress and cell death are associated with myocardial inflammation in acute KD. kawasaki disease, nt-probnp, sst2, copeptin, ct-proet-1, mr-proadm, mr-proanp, pct, troponin i cardiac muscle, cardiovascular biomarker, cardiovascular, biomarker, child, acute, convalescent, febrile, ctni, myocardial inflammation, pediatric is used by: NIF Data Federation
has parent organization: University of California at San Diego; California; USA
Kawasaki disease, Normal PMID:21777987 nlx_144644 http://neuinfo.org/nif/nifgwt.html?query=kawasaki&category=Data%20Type:Dataset SCR_008839 2026-09-05 06:33:29 0

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