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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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SnapATAC2 Resource Report Resource Website 1+ mentions |
SnapATAC2 (RRID:SCR_026622) | software resource, software toolkit, source code | Software Python/Rust package for single-cell epigenomics analysis. | Single-cell epigenomics analysis, | NEI R01EY031663; NHGRI U01HG012059; NHGRI UM1HG011585; NIA R24AG073198; NIA R56AG069107; NIA U54AG079758; NIMH RF1MH128838; NIMH U01MH114828; NIMH U01MH121282; NIMH U19MH114831; NIMH UM1MH130994 |
PMID:38191932 | Free, Available for download, Freely available | SCR_026622 | 2026-09-05 06:35:27 | 4 | |||||||||
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TEProf3 Resource Report Resource Website 1+ mentions |
TEProf3 (RRID:SCR_027288) | software resource, software toolkit, source code | Software pipeline to detect Transposable Elements transcripts. Used to identify TE-derived promoters and transcripts using transcriptomic data from multiple sources, including short-read RNA-seq data, long-read RNA-seq data and single cell RNA-seq data. | Transposable Elements, Transposable Elements transcripts, detect TE transcripts, transcriptomic data, short-read RNA-seq data, long-read RNA-seq data, single cell RNA-seq data, | NHGRI R01HG007175; NHGRI U01HG013227; NIA R01AG078958; NINDS U24NS132103 |
PMID:40360186 | Free, Available for download, Freely available, | SCR_027288 | , TE-derived Promoter Finder 3 | 2026-09-05 06:35:44 | 1 | ||||||||
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hdWGCNA Resource Report Resource Website 10+ mentions |
hdWGCNA (RRID:SCR_027496) | software resource, software toolkit, source code | Software R package for performing weighted gene co-expression network analysis in high dimensional transcriptomics data such as single-cell RNA-seq or spatial transcriptomics. | weighted gene co-expression network, high dimensional transcriptomics data, single-cell RNA-seq, transcriptomics | NIA 1RF1AG071683; NIA 3U19AG068054; NIA U54 AG054349; NIDA 1U01DA053826; NINDS P01NS084974 |
PMID:37426759 | Free, Available for download, Freely available | SCR_027496 | hd Weighted Gene Co-expression Network Analysis | 2026-09-05 06:35:49 | 10 | ||||||||
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CIPR-Package Resource Report Resource Website 1+ mentions |
CIPR-Package (RRID:SCR_027697) | software resource, software toolkit, source code | Software R package for annotating cell clusters in scRNAseq data. | annotating cell clusters in scRNAseq data, annotating cell clusters, scRNAseq data, single cell RNA sequencing experiments, | NIA R01 AG047956; NIA R01 AI123106 |
PMID:32414321 | Free, Available for download, Freely available | SCR_027697 | Cluster Identity PRedictor Package, Cluster Identity PRedictor (CIPR) | 2026-09-05 06:35:55 | 1 | ||||||||
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Alzheimers Disease Genetics Consortium Resource Report Resource Website 10+ mentions |
Alzheimers Disease Genetics Consortium (RRID:SCR_004004) | ADGC | consortium, data or information resource, data set, organization portal, portal | Consortium to conduct genome-wide association studies (GWAS) to identify genes associated with an increased risk of developing late-onset Alzheimer''''s disease (LOAD). The goal of the ADGC is to identify genetic variants associated with risk for AD. It plans to do this through the following collaborative goals: # Identify genes responsible for AD susceptibility # Identify AD sub-phenotype genes rate-of-progression plaque / tangle load / distribution biomarker variability # Generate a genetic data resource for the AD research community Data generated by ADGC is available at the following website: https://www.niagads.org/content/alzheimers-disease-genetics-consortium-adgc-collection | genome-wide association study, gene, biomarker, basic science, genetic variant, genetics, african-american, caucasian |
is listed by: Consortia-pedia is related to: University of Pennsylvania Perelman School of Medicine; Pennsylvania; USA is related to: Icahn School of Medicine at Mount Sinai; New York; USA is related to: University of Washington; Seattle; USA is related to: Boston University; Massachusetts; USA is related to: Washington University in St. Louis; Missouri; USA is related to: Vanderbilt University; Tennessee; USA is related to: Oregon Health and Science University; Oregon; USA is related to: Columbia University; New York; USA is related to: University of Miami; Florida; USA is related to: Banner Alzheimer's Institute; Arizona; USA is related to: Indiana University; Indiana; USA is related to: University of Toronto; Ontario; Canada is related to: Mayo Clinic Florida; Florida; USA is related to: Johns Hopkins University; Maryland; USA is related to: Albert Einstein College of Medicine; New York; USA is related to: Genentech is related to: University of Gothenburg; Gothenburg; Sweden is related to: University of North Texas; Texas; USA is related to: University of Kentucky; Kentucky; USA is related to: University of Chicago; Illinois; USA is related to: University of Michigan; Ann Arbor; USA is related to: University of Virginia; Virginia; USA is related to: Florida Alzheimer's Disease Research Center is related to: Mayo Clinic is related to: Emory University; Georgia; USA is related to: New York University; New York; USA is related to: Stanford University; Stanford; California is related to: Northwestern University Feinberg School of Medicine; Illinois; USA is related to: University of Alabama; Alabama; USA is related to: University of Arkansas for Medical Sciences; Arkansas; USA is related to: University of San Diego; California; USA is related to: University of California at Irvine; California; USA is related to: University of California at Los Angeles; California; USA is related to: University of California at San Diego; California; USA is related to: University of California at San Francisco; California; USA is related to: University of Pittsburgh; Pennsylvania; USA is related to: University of Southern California; Los Angeles; USA is related to: University of Texas Southwestern Medical Center; Texas; USA is related to: National Alzheimer's Coordinating Center is related to: Childrens Hospital of Philadelphia - Research Institute; Pennsylvania; USA is related to: National Institute on Aging is related to: University of California at Davis; California; USA is related to: Mayo Clinic College of Medicine is related to: Wake Forest University; North Carolina; USA is related to: National Cell Repository for Alzheimer's Disease is related to: International Genomics of Alzheimers Project is related to: National Alzheimer's Coordinating Center has parent organization: University of Pennsylvania Perelman School of Medicine; Pennsylvania; USA |
NIA UO1AG032984 | nlx_158415 | SCR_004004 | Alzheimer''''s Disease Genetics Consortium (ADGC), Alzheimer''''s Disease Genetics Consortium | 2026-09-05 06:25:12 | 12 | |||||||
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UAB Alzheimer's Disease Center Resource Report Resource Website |
UAB Alzheimer's Disease Center (RRID:SCR_004305) | ADC, UAB ADC | biomaterial supply resource, brain bank, material resource, tissue bank | The UAB Alzheimer's Disease Center provides comprehensive treatment for Alzheimer's patients while also promoting research for the prevention and cure of Alzheimer's disease and related disorders. The ADC is an interdisciplinary program of scientists working in areas including neurology, psychiatry, genetics, and psychology. The Center provides comprehensive treatment and promotes research for the prevention and/or cure of Alzheimer's disease and other related disorders with memory loss and impaired cognition. A major emphasis of research is the maintenance of a clinical research database comprised of neurological, medical, and neuropsychological test data from participants seen in the ADRC Clinical study since 1999, many of whom have been followed for several years in the study. | brain, alzheimer's disease, mild cognitive impairment, brain donation, clinical research database |
is listed by: One Mind Biospecimen Bank Listing has parent organization: University of Alabama at Birmingham; Alabama; USA |
Alzheimer's disease, Mild Cognitive Impairment, Aging | NIA 1P50 AG16582 | Researchers interested in Alzheimer's disease may access the clinical research data | nlx_143674 | http://main.uab.edu/adc/ http://www.uab.edu/medicine/neurology/alzheimers-disease-center | SCR_004305 | UAB Alzheimer's Disease Center, University of Alabama at Birmingham Alzheimer's Disease Center | 2026-09-05 06:25:17 | 0 | ||||
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LONI Visualization Tool Resource Report Resource Website |
LONI Visualization Tool (RRID:SCR_000765) | LONI Viz, LONI_Viz, LOVE | data processing software, data visualization software, software application, software resource | A versatile 1D, 2D and 3D data viewer geared for cross-platform visualization of stereotactic brain data. It is a 3-D viewer that allows volumetric data display and manipulation of axial, sagittal and coronal views. It reads Analyze, Raw-binary and NetCDF volumetric data, as well as, Multi-Contour Files (MCF), LWO/LWS surfaces, atlas hierarchical brain-region labelings ( Brain Trees). It is a portable Java-based software, which only requires a Java interpreter and a 64 MB of RAM memory to run on any computer architecture. LONI_Viz allows the user to interactively overlay and browse through several data volumes, zoom in and out in the axial, sagittal and coronal views, and reports the intensities and the stereo-tactic voxel and world coordinates of the data. Expert users can use LONI_Viz to delineate structures of interest, e.g., sulcal curves, on the 3 cardinal projections of the data. These curves then may be use to reconstruct surfaces representing the topological boundaries of cortical and sub-cortical regions of interest. The 3D features of the package include a SurfaceViewer and a full real-time VolumeRenderer. These allow the user to view the relative positions of different anatomical or functional regions which are not co-planar in any of the axial, sagittal or coronal 2D projection planes. The interactive part of LONI_Viz features a region drawing module used for manual delineation of regions of interest. A series of 2D contours describing the boundary of a region in projection planes (axial, sagittal or coronal) could be used to reconstruct the surface-representation of the 3D outer shell of the region. The latter could then be resliced in directions complementary to the drawing-direction and these complementary contours could be loaded in all tree cardinal views. In addition the surface object could be displayed using the SurfaceViewer. A pre-loading data crop and sub-sampling module allows the user to load and view practically data of any size. This is especially important when viewing cryotome, histological or stained data-sets which may reach 1GB (109 bytes) in size. The user could overlay several pre-registered volumes, change intensity colors and ranges and the inter-volume opacities to visually inspect similarities and differences between the different subjects/modalities. Several image-processing aids provide histogram plotting, image-smoothing, etc. Specific Features: * Region description DataBase * Moleculo-genetic database * Brain anatomical data viewer * BrainMapper tool * Surface (LightWave objects/scenes) and Volume rendering tools * Interactive Contour Drawing tool Implementation Issues: * Applet vs. Application - the software is available as both an applet and a standalone application. The former could be used to browse data from within the LONI database, however, it imposes restrictions on file-size, Internet connection and network-bandwidth and client/server file access. The later requires a local install and configuration of the LONI_Viz software * Extendable object-oriented code (Java), computer architecture independent * Complete online software documentation is available at http://www.loni.ucla.edu/LONI_Viz and a Java-Class documentation is available at http://www.loni.ucla.edu/~dinov/LONI_Vis.dir/doc/LONI_Viz_Java_Docs.html | brain, atlas, visualization, gene mapping, atlas application, magnetic resonance, surface analysis |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: Biositemaps has parent organization: Laboratory of Neuro Imaging |
Aging | NIA P50 AG16570; NLM 2R01 LM05639-06; NIA K08 AG100784; NCRR 2 P41 RR13642; NIMH 5 P01 MN52176; NSF DUE 0442992; NCRR U52 RR021813 |
PMID:16598642 | Free, Available for download, Freely available | nif-0000-23313 | http://www.nitrc.org/projects/incf_loni-viz | http://www.loni.ucla.edu/Software/LOVE | SCR_000765 | LONI Visualization Environment, LONI Viz environment, LOVE | 2026-09-05 06:24:25 | 0 | ||
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Joseph and Kathleen Bryan Alzheimer's Disease Research Center Resource Report Resource Website |
Joseph and Kathleen Bryan Alzheimer's Disease Research Center (RRID:SCR_005025) | data or information resource, disease-related portal, patient-support portal, portal, research forum portal, topical portal | An Alzheimer's disease center (ADC) that offers support services for families caring for persons with memory disorders, community outreach and education programs, in addition to its clinical and basic research activities. Information on current scientific and clinical findings is offered to the general public, medical and scientific community. An important emphasis of the Bryan ADRC is to advance basic medical discovery concerning AD and related dementias. This basic science mission is facilitated through the DNA cell repository located in the Institute of Genome Sciences and Policy (IGSP) and the Bryan ADRC brain donation program of the Kathleen Price Bryan Brain Bank. These affiliated Bryan ADRC programs provide a source of fresh brain tissue. | alzheimer's disease, memory disorder, clinical trial, dementia, human brain |
has parent organization: Duke University School of Medicine; North Carolina; USA is parent organization of: Duke University Kathleen Price Bryan Brain Bank |
Alzheimer's disease, Memory disorder, Dementia | NIA | Public, Samples are available to the research community | nlx_144012 | SCR_005025 | Bryan Alzheimer's Disease Research Center, Joseph & Kathleen Bryan Alzheimer's Disease Research Center, Bryan ADRC, Joseph and Kathleen Bryan Alzheimer's Disease Research Center | 2026-09-05 06:25:28 | 0 | ||||||
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National Archive of Computerized Data on Aging (NACDA) Resource Report Resource Website 10+ mentions |
National Archive of Computerized Data on Aging (NACDA) (RRID:SCR_005876) | NACDA | data or information resource, data repository, database, portal, service resource, storage service resource, topical portal | Archive of data relevant to gerontological and aging research. Used to advance research on aging. Subjects include demographic, social, economic, and psychological characteristics of older adults, physical health and functioning of older adults, and health care needs of older adults. NACDA staff represents team of professional researchers, archivists and technicians who work together to obtain, process, distribute, and promote data relevant to aging research. | gerontology, secondary analysis, data set, age, intelligence, life span, productive, late adult human |
is recommended by: National Library of Medicine lists: Social Environment and Biomarkers of Aging Study in Taiwan lists: Advanced Cognitive Training for Independent and Vital Elderly (ACTIVE) is listed by: re3data.org is related to: Alameda County Health and Ways of Living Study is related to: Charleston Heart Study is related to: Census Microdata Samples Project is related to: Chinese Longitudinal Healthy Longevity Survey (CLHLS) is related to: Early Indicators of Later Work Levels Disease and Death (EI) - Union Army Samples Public Health and Ecological Datasets is related to: Cross-National Equivalent Files is related to: National Survey of Midlife Development in the United States is related to: Precursors of Premature Disease and Death is related to: New Beneficiary Data System is related to: National Survey of Self-Care and Aging is related to: Aging Status and Sense of Control (ASOC) has parent organization: Inter-university Consortium for Political and Social Research (ICPSR) is parent organization of: Established Populations for Epidemiologic Studies of the Elderly is parent organization of: National Survey of the Japanese Elderly is parent organization of: Piedmont Health Survey of the Elderly is parent organization of: Second Malaysian Family Life Survey is parent organization of: Longitudinal Study of Generations is parent organization of: Longitudinal Study of Elderly Mexican American Health is parent organization of: Matlab Health and Socio-Economic Survey is parent organization of: National Long Term Care Survey is parent organization of: National Nursing Home Survey Follow-Up is parent organization of: National Social Life Health and Aging Project (NSHAP) is parent organization of: National Survey of Families and Households |
Aging | NIA | Restricted | nlx_149438, r3d100010259 | https://www.icpsr.umich.edu/icpsrweb/NACDA/index.jsp, https://doi.org/10.17616/R3Z31W | SCR_005876 | , NACDA, National Archive of Computerized Data on Aging | 2026-09-05 06:25:43 | 21 | ||||
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Cognitive and Emotional Health Project: The Healthy Brain Resource Report Resource Website |
Cognitive and Emotional Health Project: The Healthy Brain (RRID:SCR_007390) | CEHP | data or information resource, database, portal, topical portal | Trans-NIH project to assess the state of longitudinal and epidemiological research on demographic, social and biologic determinants of cognitive and emotional health in aging adults and the pathways by which cognitive and emotional health may reciprocally influence each other. A database of large scale longitudinal study relevant to healthy aging in 4 domains was created based on responses of investigators conducting these studies and is available for query. The four domains are: * Cognitive Health * Emotional Health * Demographic and Social Factors * Biomedical and Physiologic Factors | healthy aging, cognitive health, demographics, longitudinal study, aging study, late adult human, cognition, emotion, adult human, longitudinal, epidemiology, psychosocial, questionnaire, social factor, physiologic factor | has parent organization: National Institutes of Health | Cognitive impairment, Emotional disorder, Aging | NIA ; NIMH ; NINDS |
nif-0000-00421 | SCR_007390 | Cognitive and Emotional Health Project (CEHP), Cognitive Emotional Health Project: The Healthy Brain, Cognitive Emotional Health Project, Cognitive and Emotional Health Project | 2026-09-05 06:26:11 | 0 | ||||||
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NIA Mutant Mouse Aging Colony Handbook Resource Report Resource Website |
NIA Mutant Mouse Aging Colony Handbook (RRID:SCR_007328) | NIA Mutant Mouse Aging Colony | biomaterial supply resource, material resource, organism supplier | THIS RESOURCE IS NO LONGER IN SERVICE, documented on September 09, 2013. Supply aged mutant and transgenic mice for NIH-supported research directly related to the biology of aging. The mice are raised by the NIA's contractor, Taconic Farms, in Specific Pathogen-Free (SPF) barrier facilities. The strains in the mutant mouse aging colony have been donated by the investigators who developed the models, and those investigators are still the legally recognized owners of the intellectual property. A Material Transfer Agreement (MTA) is required to purchase the mice (a one-time requirement per strain). There are restrictions to the use of this colony as described in the MTA. These restrictions include a prohibition against breeding the mice purchased from the NIA Mutant Mouse Aging Colony, agreement that the mice will not be used for commercial purposes, and agreement that the mice and all derivatives will not be transferred to third parties. The restrictions are further spelled out in the MTA. Animals are sold by age, not weight, and ages are stated in 1 month intervals only; all animals born within a calendar month are considered to be the same age, so date of birth (DOB) is given as month/year. All mice are virgins. The mutant mouse aging colony is slated to end in September 2013. Old mice will be available until September 2013 but the availability of young mice will end earlier. Entries of different strains into the mutant mouse aging colony will end at different times, dependent on the lifespan and pattern of use of the strain. Mouse models include: * Snell Dwarf (3623) ??????????????? last entry will be the November 2011 DOB (date of birth) * Ames Dwarf (324) ??????????????? last entry will be the October 2012 DOB * A53T ???????????????????????-synuclein Transgenic (322) ??????????????? last entry will be the December 2012 DOB * GFP Transgenic (317) ??????????????? last entry will be the January 2013 DOB | mouse, elderly, mus, mutant mouse strain, old mouse, mouse model |
is listed by: One Mind Biospecimen Bank Listing is related to: One Mind Biospecimen Bank Listing has parent organization: NIA Scientific Resources |
Aging | NIA | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-00207 | http://www.nia.nih.gov/ResearchInformation/ScientificResources/NIAMutantMouseAgingColony/ | SCR_007328 | Mutant Mouse Aging Colony | 2026-09-05 06:26:10 | 0 | ||||
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NIH NeuroBioBank Resource Report Resource Website 100+ mentions |
NIH NeuroBioBank (RRID:SCR_003131) | NBB | biomaterial supply resource, brain bank, material resource, tissue bank | National resource for investigators utilizing human post-mortem brain tissue and related biospecimens for their research to understand conditions of the nervous system. Federated network of brain and tissue repositories in the United States that collects, evaluates, stores, and makes available to researchers, brain and other tissues in a way that is consistent with the highest ethical and research standards. The NeuroBioBank ensures protection of the privacy and wishes of donors. Provides information to the public about the need for tissue donation and how to register as a donor. | human post-mortem brain tissue, human brain, brain tissue, tissue, adult, child, brain donation, human post-mortem brain tissue and related biospecimens, |
is used by: BRAIN Initiative Cell Atlas Network is used by: BICCN is listed by: One Mind Biospecimen Bank Listing has parent organization: National Institutes of Health |
Brain disorder, Autism spectrum disorder, Autism, Major Depressive Disorder, Schizophrenia, Multiple Sclerosis, Epilepsy, Traumatic brain injury | NIA ; NICHD ; NIDA ; NIMH ; NINDS |
PMID:29496155 | Free, Freely available | nlx_156783 | SCR_003131 | NeuroBioBank, National Institutes of Health NeuroBioBank | 2026-09-05 06:24:58 | 188 | ||||
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ADNI - Alzheimer's Disease Neuroimaging Initiative Resource Report Resource Website 1000+ mentions |
ADNI - Alzheimer's Disease Neuroimaging Initiative (RRID:SCR_003007) | ADNI | data or information resource, data repository, database, service resource, storage service resource | Database of the results of the ADNI study. ADNI is an initiative to develop biomarker-based methods to detect and track the progression of Alzheimer's disease (AD) that provides access to qualified scientists to their database of imaging, clinical, genomic, and biomarker data. | mri, alzheimer’s disease, cognitive assessment, neuroimaging, disease study, disease progression, biomarker, FASEB list |
is used by: Biomarkers Across Neurodegenerative Diseases is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: Consortia-pedia is related to: Alzheimers Association is related to: Alzheimers Drug Discovery Foundation |
Alzheimer's disease, Mild Cognitive Impairment, Elderly control, Traumatic brain injury, Post-Traumatic Stress Disorder, Aging | NIA U01AG024904; NIA P30AG010129; NIA K01AG030514 |
Application required, Account required, This resource is available to the scientific community | SciRes_000144, nif-0000-00516 | http://adni.loni.usc.edu/, http://www.nitrc.org/projects/adni/, http://www.adni3.org/ | http://www.loni.ucla.edu/ADNI/ | SCR_003007 | Alzheimers Disease Neuroimaging Initiative, Alzheimer's Disease Neuroimaging Initiative (ADNI), Alzheimer's Disease Neuroimaging Initiative | 2026-09-05 06:24:56 | 4635 | |||
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Automatic Analysis Resource Report Resource Website 1+ mentions |
Automatic Analysis (RRID:SCR_003560) | aa | data analysis software, data processing software, image analysis software, image processing software, software application, software resource, software toolkit, time-series analysis software, workflow software | Integration framework for major open source packages in neuroimaging including SPM, FSL, FreeSurfer, EEGLAB, and Fieldtrip. Efficient neuroimaging workflows and parallel processing using Matlab and XML. Addresses challenges of processing multimodal datasets, like combining anatomy, functional MRI, diffusion, and EEG, to yield integrated views of brain. Allows to design, execute, and share pipelines utilizing multiple open source packages. Supports parallelized execution to address challenges of large cohort studies and provides quality control offering group statistics and reporting facilities to help identify outlier subjects and erroneous processing steps. | Neuroimaging workflows, processing multimodal datasets, brain integrated views, fmri, eeg, meg, dwi, morphometry, parallel-processing, scripting, record-keeping, |
uses: FreeSurfer uses: MATLAB uses: SPM |
NIA R01 AG038490; NIDCD R01 DC013063; NSERC Discovery and the Canada Excellence Research Chair (CERC) in Cognitive Neuroimaging ; NSERC/CIHR CHRP |
PMID:25642185 | nlx_157695 | SCR_003560 | automaticanalysis, AutomaticAnalysis | 2026-09-05 06:25:05 | 8 | ||||||
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BRAID Resource Report Resource Website 10+ mentions |
BRAID (RRID:SCR_008702) | BRAID | data or information resource, database, image, software resource, source code | Large-scale archive of normalized digital spatial and functional data with an analytical query mechanism. One of its many applications is the elucidation of brain structure-function relationships. BRAID stores spatially defined data from digital brain images which have been mapped into normalized Cartesian coordinates, allowing image data from large populations of patients to be combined and compared. The database also contains neurological data from each patient and a query mechanism that can perform statistical structure-function correlations. The project is developing database technology for the manipulation and analysis of 3-dimensional brain images derived from MRI, PET, CT, etc. BRAID is based on the PostgreSQL server, an object/relational DBMS, which allows a standard relational DBMS to be augmented with application-specific datatypes and operators. The BRAID project is adding operations and datatypes to support querying, manipulation and analysis of 3D medical images, including: * Image Datatypes: BRAID supports a family of 3D image datatypes, each having an abstract type and an implementation type. Abstract types include boolean (for regions of interest), integer, float, vector (for representing morphological changes), tensor (for representing derivatives and standard deviations of vector images) and color. Implementation types at present include line-segment format and voxel array. * Image Operators: BRAID supports addition of images, multiplication (which is interpreted as intersection for boolean images), coercion of an image''s abstract or implementation type to another value, and determination of volumes of regions of interest. * Statistical Operators: A chi-squared test has been added to SQL as an aggregate operator on pairs of boolean values. * Web Interface: A general-purpose Web gateway allows the results of queries that return computed images to be displayed. You can download the BRAID source code 2.0. This version is developed under postgreSQL 7.3.4., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | brain image, data mining, brain, magnetic resonance, analysis, image display, mri, pet, ct, structure, function, brain | has parent organization: University of Pennsylvania; Philadelphia; USA | Aging | NIA R01 AG13743 | PMID:18467275 PMID:11191696 PMID:9874539 |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_143545, r3d100010227 | https://doi.org/10.17616/R3F88M | SCR_008702 | BRAID: Brain Image Database, Brain Image Database | 2026-09-05 06:26:27 | 11 | |||
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Emory Alzheimer's Disease Research Center Resource Report Resource Website |
Emory Alzheimer's Disease Research Center (RRID:SCR_008761) | data or information resource, disease-related portal, portal, topical portal | An Alzheimer's research center which focuses on mild cognitive impairment and early diagnosis and treatment of memory disorders. The Center hosts clinical trials in which the public can participate. Its resources for scientists include a tissue and biospecimen banking facility, the Emory neurology database, and research seminars. | memory loss, mild cognitive impairment, alzheimer's disease, clinical evaluation, clinical trial, memory disorder, neurodegenerative disease, meeting, seminar |
is affiliated with: Emory ADRC Tissue and Biospecimen Banking Facility is affiliated with: Emory Neurology Database has parent organization: Emory University School of Medicine; Atlanta; Georgia; USA |
Aging, Alzheimer's disease | NIA 2P50AG025688-06 | Public, Available to the research community | nlx_144034 | SCR_008761 | Emory Alzheimer's Disease Research Center, Emory ADRC | 2026-09-05 06:26:28 | 0 | ||||||
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Johns Hopkins Alzheimer's Disease Research Center Resource Report Resource Website |
Johns Hopkins Alzheimer's Disease Research Center (RRID:SCR_008757) | biomaterial supply resource, brain bank, material resource, tissue bank | A Alzheimer's Disease Research Center (ADRC) whose goal is to conduct basic and clinical research aimed at understanding Alzheimer's disease. The Center enrolls a variety of individuals for clinical trials, evaluation and follow-up, including: normal control subjects, individuals with mild memory problems, and patients diagnosed with Alzheimer's Disease or related dementias. Researchers can request data and specimens obtained from ADRC subjects. These include blood or DNA, brain specimens, and cross-sectional or longitudinal clinical and cognitive data, all from ADRC subjects. | alzheimer's disease, mild memory problem, dementia, clinical data, cognitive data, blood, dna, brain, tissue, human, clinical trial, memory |
is listed by: One Mind Biospecimen Bank Listing has parent organization: Johns Hopkins University School of Medicine; Baltimore, Maryland; USA |
Alzheimer's disease, Normal control, Mild memory problem, Dementia, Aging | NIA | Public, Researchers can request data and specimens obtained from ADRC subjects | nlx_144105 | SCR_008757 | Johns Hopkins ADRC, Johns Hopkins Alzheimer's Disease Research Center | 2026-09-05 06:26:28 | 0 | ||||||
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Brain Research Institute Biobank Resources Resource Report Resource Website |
Brain Research Institute Biobank Resources (RRID:SCR_008756) | biomaterial supply resource, brain bank, material resource, tissue bank | Brain bank resources which include postmortem human frozen brain tissue and matched cerebrospinal fluid (CSF) and blood available for scientists to search for etiopathogeneses of human disease. The National Neurological Research Specimen Bank and the Multiple Sclerosis Human Neurospecimen Bank maintains a collection of quick frozen and formalin fixed postmortem human brain tissue and frozen cerebrospinal fluid from patients with neurological diseases, including Alzheimer's Disease, amyotrophic lateral sclerosis, depressive disorder/suicide, and epilepsy, among others. Diagnoses are documented by clinical medical records and gross/microscopic neuropathology. The Neuropathology Laboratory at the UCLA Medical Center maintains a bank of frozen, formalin and paraformaldehyde-fixed and paraffin-embedded postmortem human brain tissues and frozen cerebrospinal fluid (CSF) from patients who die with Alzheimer's disease and other dementing and degenerative illnesses, as well as control materials removed in a similar fashion from patients who are neurologically normal. | postmortem, brain, coronal, brain tissue, cerebral spinal fluid, blood, cerebral spinal fluid cell, cell-free cerebral spinal fluid, serum, plasma, buffy coat, frozen, formalin fixed, paraformaldehyde-fixed, paraffin-embedded, neurological disease, alzheimer's disease, amyotrophic lateral sclerosis, depressive disorder, suicide, epilepsy, huntington's disease, multiple sclerosis, parkinson's disease, progressive supranuclear palsy, schizophrenia, stroke, cerebrovascular accident, fronto-temporal dementia, neurologically normal, coronal section, control, clinical data |
is listed by: One Mind Biospecimen Bank Listing has parent organization: Brain Research Institute |
Neurological disease, Alzheimer's disease, Amyotrophic Lateral Sclerosis, Depressive Disorder, Suicide, Epilepsy, Huntington's disease, Multiple Sclerosis, Parkinson's disease, Progressive Supranuclear Palsy, Schizophrenia, Stroke, Cerebrovascular Accident, Fronto-temporal dementia, Aging | NINDS ; NIMH ; National MS Society ; United States Department of Veterans Affairs ; Veterans Affairs West Los Angeles Healthcare Center ; NIA |
Public, Available to the research community | nlx_143996 | http://www.bri.ucla.edu/bri_research/research_resources.asp | SCR_008756 | Brain Research Institute Research Resources, Brain Research Institute Biobanks, BRI Research Resources, BRI Biobanks, BRI Biobank Resources | 2026-09-05 06:26:28 | 0 | |||||
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Mayo Clinic Jacksonville: Neuropathology and Microscopy Resource Report Resource Website 1+ mentions |
Mayo Clinic Jacksonville: Neuropathology and Microscopy (RRID:SCR_008753) | biomaterial supply resource, brain bank, material resource, tissue bank | A brain bank and laboratory focused on memory and motor disorders. Brains are sent to the laboratory for diagnosis and research for the State of Florida Alzheimer Disease Initiative and for the Society for Progressive Supranuclear Palsy. As part of this brain banking function, fixed and frozen brain samples are obtained at autopsy and sent to the laboratory for diagnostic evaluation and for various types of research studies. The major types of analyses performed on the brain samples include neuro-histology, immunohistochemistry, confocal microscopy, electron microscopy and image analysis, as well as immunoassays. The latter are based upon Western blotting and enzyme linked immunoassays. The laboratory has a specific interest in the interface between normal aging and Alzheimer's disease, as well as in non-Alzheimer's degenerative disorders such as Lewy body dementia, corticobasal degeneration, progressive supranuclear palsy and frontotemporal dementia. The primary focus of research on aging is neuropathologic characterization of brains of individuals who had been prospectively and longitudinally evaluated during life. These studies aim to determine differences in a range of biologic parameters in brains of people with normal cognitive, mild cognitive impairment and dementia. Their focus on Parkinson's disease is to identify preclinical Parkinson's disease in order to develop means for early diagnosis. | tissue, brain, fixed, frozen, alzheimer's disease, normal aging, memory disorder, motor disorder, parkinson's disease, progressive supranuclear palsy, lewy body disease, corticobasal degeneration, frontotemporal dementia, dementia, mild cognitive impairment, mouse, neurofibrillary degeneration, postmortem, normal control, autopsy |
is listed by: One Mind Biospecimen Bank Listing has parent organization: Mayo Clinic Florida; Florida; USA has parent organization: Mayo Alzheimer's Disease Research Center has parent organization: Florida Alzheimer's Disease Research Center |
Alzheimer's disease, Aging, Memory disorder, Motor disorder, Parkinson's disease, Progressive Supranuclear Palsy, Lewy Body Disease, Corticobasal Degeneration, Frontotemporal dementia, Dementia, Mild Cognitive Impairment | NIA P50-AG16574; NIA P50-AG25711; NINDS P50-40256 |
nlx_143952 | SCR_008753 | Mayo Clinic Jacksonville: Neuropathology Microscopy, Mayo Clinic Florida: Neuropathology and Microscopy, Neuropathology and Microscopy - Dennis W. Dickson, Mayo Clinic Florida: Neuropathology and Microscopy - Dennis W. Dickson | 2026-09-05 06:26:27 | 1 | |||||||
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Mount Sinai Alzheimer's Disease Research Center Resource Report Resource Website |
Mount Sinai Alzheimer's Disease Research Center (RRID:SCR_008780) | Mount Sinai ADRC | biomaterial supply resource, brain bank, material resource, tissue bank | A research facility and clinical program that is dedicated to the study and the treatment of both normal aging and Alzheimer's disease. This facility will accommodate requests for its resources (for example, data or tissue) from investigators that are not funded by the ADRC. Their team is composed of experts in geriatrics, geriatric psychiatry and psychology, neurology, pathology, and radiology. All team members work to provide services to those with memory disorders. This center sponsors educational programs for healthcare professionals and community groups. Data from the ADRC cores are available to all ADRC investigators after approval from the PI who collected the data. Data generated by the ADRC cores are communicated to the National Alzheimer's Coordinating Center (NACC) and can be available through them. Tissue can be distributed after approval of the Tissue Allocation Committee, and can be used for further research. | normal aging, alzheimer's disease, late adult human, memory disorder, memory, dementia, healthy, brain tissue, brain, tissue, paraffin embedded, block, stain, clinical |
is listed by: One Mind Biospecimen Bank Listing has parent organization: Icahn School of Medicine at Mount Sinai; New York; USA |
Alzheimer's disease, Aging, Healthy | NIA | Public / Collaborator: The ADRC at Mount Sinai School of Medicine is receptive to requests of ADRC resources (data, Tissue, And so on). The ADRC welcomes requests for tissue from Investigators not currently funded by the ADRC. Tissues needed for conduct of ADRC projects are distributed directly to PIs. Distribution of tissue will be made on a collaborative basis only and determined on a case by case basis by the Tissue Allocation Committee. | nlx_144162 | SCR_008780 | Mount Sinai School of Medicine ADRC, Mount Sinai School of Medicine Alzheimer's Disease Research Center, Mount Sinai Alzheimer's Disease Research Center | 2026-09-05 06:26:28 | 0 |
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