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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Mosquito Insecticide Resistance Ontology
 
Resource Report
Resource Website
Mosquito Insecticide Resistance Ontology (RRID:SCR_003864) MIRO ontology, data or information resource, controlled vocabulary Application ontology for entities related to insecticide resistance in mosquitos obo is listed by: BioPortal nlx_157486 SCR_003864 2026-08-15 11:22:39 0
EU-AIMS
 
Resource Report
Resource Website
1+ mentions
EU-AIMS (RRID:SCR_003861) EU-AIMS organization portal, data or information resource, consortium, portal Consortium aiming to generate tools that will enhance understanding of autism spectrum disorders (ASD) and pave the way for the development of new, safe and effective treatments for use in both children and adults. For example, the team will gather samples from people bearing certain mutations associated with ASD; this will pave the way for the generation of cell lines that can be used to test treatments. Elsewhere, the researchers will advance the use of brain scans as a tool to boost ASD drug discovery and also identify which people with ASD might respond best to a given drug. The project will also create a pan-European network of clinical sites. As well as making it easier to run clinical trials, this network will create an interactive platform for those with ASD and professionals. By the end of the 5 year project they expect to provide novel validated cellular assays, animal models, new fMRI methods with dedicated analysis techniques, new PET radioligands, as well as new genetic and proteomic biomarkers for patient-segmentation or individual response prediction. They will provide a research network that can rapidly test new treatments in man. These tools should provide their EFPIA partners with an added competitive advantage in developing new drugs for ASD. basic science, tool development, child, adult human, young human, treatment, diagnose, symptom, clinical, cell line, drug, drug discovery, neuroimaging, mutation, clinical trial, medicine is listed by: Consortia-pedia
is related to: Roche
is related to: Janssen Research and Development
is related to: Pfizer Animal Genetics
is related to: King's College London; London; United Kingdom
is related to: Birkbeck University of London; London; United Kingdom
is related to: Central Institute of Mental Health; Mannheim; Germany
is related to: CEA; Gif sur Yvette; France
is related to: European Molecular Biology Laboratory
is related to: University College London; London; United Kingdom
is related to: Pasteur Institute
is related to: Karolinska Institute; Stockholm; Sweden
is related to: Max-Planck-Gesellschaft
is related to: Biomedical University Campus of Rome; Rome; Italy
is related to: University of Basel; Basel; Switzerland
is related to: Ulm University; Baden-Wurttemberg; Germany
is related to: University of Cambridge; Cambridge; United Kingdom
is related to: Autism Speaks
is related to: GABO:mi
is related to: deCODE genetics
is related to: Noldus
has parent organization: Roche
Innovative Medicines Initiative ;
EFPIA
nlx_158184 SCR_003861 European Autism Interventions - A Multicentre Study for Developing New Medications, European Autism Interventions 2026-08-15 11:22:37 2
Roslin Cells
 
Resource Report
Resource Website
1+ mentions
Roslin Cells (RRID:SCR_003857) Roslin Cells commercial organization Organization that supplies undifferentiated, clinical grade, human pluripotent stem cell lines to the life science community, and works with academic, clinical and commercial colleagues to enable and facilitate the use of these high grade cells in the development of new reagents, drugs and cellular therapeutics. They also seek to drive the economic development of the stem cell sector in Scotland. Their products can act as a valuable tool in supporting clients' drug discovery, development and clinical research programmes. pluripotent stem cell, induced pluripotent stem cell, cell therapy, embryonic stem cell line, clinical grade is listed by: One Mind Biospecimen Bank Listing
is parent organization of: EBiSC
nlx_158181 SCR_003857 Roslin Cells Ltd 2026-08-15 11:22:43 2
EARIP
 
Resource Report
Resource Website
EARIP (RRID:SCR_003854) EARIP organization portal, data or information resource, consortium, portal Consortium that convenes asthma experts from across Europe to define research gaps to reduce the impact of asthma. The project activities range from basic cell science research, to assessing and improving European healthcare systems. Their activities include workshops, prioritization exercises, consensus strategies, and the development and publication of a set of recommendations about what's needed to reduce asthma deaths and hospitalizations. The eventual goal is to have a comprehensive R&D roadmap for asthma. EARIP will target a number of asthma research areas to ensure a comprehensive overview of all current research strategies from across Europe is included in the project road map. These include: * Research into biological targets, aiming to discover new targets and better define the role of existing biological targets * Identify new systems, models and tools for phenotypic stratification * Develop better and more efficient healthcare systems across Europe * Define and develop new diagnostic tools * Assess and improve patient self-management systems and provide suggestions for how these can be developed * Identify how to establish a European Innovation Partnership (EIP) for the management of asthma * Establish a European research network of clinical asthma research facilities biomarker, biological target, tool development, clinical, basic research is listed by: Consortia-pedia
is related to: Imperial College London; London; United Kingdom
is related to: Karolinska Institute; Stockholm; Sweden
is related to: European Federation of Allergy and Airways Diseases Patients Associations
is related to: European Lung Foundation
is related to: University of Athens; Athens; Greece
is related to: University of Southampton; Southampton; United Kingdom
is related to: Swiss Institute of Allergy and Asthma Research
is related to: University of Lodz; Lodz; Poland
has parent organization: Asthma UK
European Union FP7-Health Programme 602077 nlx_158171 SCR_003854 European Asthma Research and Innovation Partnership, European Asthma Research and Innovation Partnership (EARIP) 2026-08-15 11:22:37 0
Mouse Gross Anatomy and Development Ontology
 
Resource Report
Resource Website
Mouse Gross Anatomy and Development Ontology (RRID:SCR_003891) EMAP ontology, data or information resource, controlled vocabulary A structured controlled vocabulary of stage-specific anatomical structures of the mouse (Mus). obo is listed by: BioPortal nlx_157488 SCR_003891 2026-08-15 11:22:37 0
PEAR
 
Resource Report
Resource Website
500+ mentions
PEAR (RRID:SCR_003776) PEAR software resource Software for an ultrafast, memory-efficient and highly accurate pair-end read merger. It is fully parallelized and can run with as low as just a few kilobytes of memory. next-generation sequencing, sequence analysis is listed by: OMICtools
has parent organization: Heidelberg Institute for Theoretical Studies; Heidelberg; Germany
PMID:24142950 OMICS_00674 SCR_003776 Pair-end read merger, PEAR: Pair-end read merger 2026-08-15 11:22:40 914
Lhasa Limited
 
Resource Report
Resource Website
10+ mentions
Lhasa Limited (RRID:SCR_003775) Lhasa funding resource, portal, data or information resource, software resource, community building portal A not-for-profit membership organization and educational charity that facilitates collaborative data sharing projects in the pharmaceutical, cosmetics and chemistry-related industries specializing in the development of expert computer systems for toxicity and metabolism prediction. They provide a number of extensive and continually updated knowledge bases and the software needed to interrogate them. Its charitable aims include the sponsorship of activities that advance scientific knowledge and understanding and they regularly support computational chemistry events and initiatives that are of interest to Lhasa Limited members and the wider scientific community. All applications for sponsorship will be considered on their individual merits. data sharing, pharmaceutical, cosmetic, chemistry, toxicity prediction, metabolism, toxicity, metabolism prediction, prediction, database, in silico, computational chemistry, computer system is related to: MIP-DILI Membership required, For sale nlx_158058 SCR_003775 Lhasa Ltd. 2026-08-15 11:22:37 17
Electro Scientific Industries
 
Resource Report
Resource Website
Electro Scientific Industries (RRID:SCR_003895) ESI commercial organization A high technology company that is a developer and supplier of photonic and laser systems for microelectronics manufacturers. They manufacture a variety of products for testing and repairing equipment, and particularly products designed for use by manufacturers of other high-tech products. These include laser trimming systems. (Adapted from Wikipedia) microengineering, electronics, semiconductor, testing, repair, laser trimming system, photonic, laser, microelectronics is related to: ONE Study nlx_158228 SCR_003895 Electro Scientific Industries Inc. 2026-08-15 11:22:37 0
IAESTE
 
Resource Report
Resource Website
IAESTE (RRID:SCR_003773) IAESTE training resource An independent, non-profit and non-political student exchange organization that provides students in technical degrees (primarily Science, Engineering and the applied arts) with paid, course-related, training abroad and employers with highly skilled, highly motivated trainees, for long or short term projects. student, international has parent organization: Imperial College London; London; United Kingdom nlx_158047 SCR_003773 International Association for the Exchange of Students for Technical Experience 2026-08-15 11:22:40 0
Inserm Transfert
 
Resource Report
Resource Website
Inserm Transfert (RRID:SCR_003808) commercial organization A private subsidiary of the French National Institute of the Health and Medical Research (Inserm), dedicated to technology transfer (from invention disclosure to industrial partnership). It manages European and International research projects, supports large scale projects in epidemiology and public health. It has run a proof of concept fund. The company is also committed to seed financing in the biotech sector, through its dedicated seed fund company Inserm Transfert Initiative. www.inserm-transfert.fr technology transfer, epidemiology, public health is related to: AgedBrainSYSBIO
has parent organization: National Institute of Health and Medical Research; Rennes; France
is parent organization of: AgedBrainSYSBIO
nlx_158128, grid.14498.30 https://ror.org/01wftfc57 SCR_003808 Inserm-Transfert SA, Inserm Transfert SA 2026-08-15 11:22:38 0
TRANSFoRm Clinical Research Information Model
 
Resource Report
Resource Website
TRANSFoRm Clinical Research Information Model (RRID:SCR_003889) CRIM data or information resource, report, standard specification, narrative resource A clinical research information model for the integration of clinical research covering randomized clinical trials (RCT), case-control studies and database searches into the TRANSFoRm application development. TRANSFoRm clinical research is based on primary care data, clinical data and genetic data stored in databases and electronic health records and employs the principle of reusing primary care data, adapting data collection by patient reported outcomes (PRO) and eSource based Case Report Forms. CRIM was developed using the TRANSFoRm clinical use cases of GORD and Diabetes. Their use case driven approach consisted of three levels of modelling drawing heavily on the clinical research workflow of the use cases. Different available information models were evaluated for their usefulness to represent TRANSFoRm clinical research, including for example CTOM of caBIG, Primary Care Research Object Model (PRCOM) of ePCRN and BRIDG of CDISC. The PCROM model turned out to be the most suitable and it was possible to extend and modify this model with only 12 new information objects, 3 episode of care related objects and 2 areas to satisfy all requirements of the TRANSFoRm research use cases. Now the information model covers Good Clinical Practice (GCP) compliant research, as well as case control studies and database search studies, including the interaction between patient and GP (family doctor) during patient consultation, appointment, screening, patient recruitment and adverse event reporting. clinical, randomized clinical trial, clinical trial, primary care, genetic, clinical research, electronic health record, model, interoperability uses: Clinical Data Interchange Standards Consortium
is used by: TRANSFoRm Data Integration Models
has parent organization: TRANSFoRm
nlx_158219 SCR_003889 Clinical Research Information Model 2026-08-15 11:22:40 0
Minimum Information About a Simulation Experiment
 
Resource Report
Resource Website
1+ mentions
Minimum Information About a Simulation Experiment (RRID:SCR_003800) MIASE data or information resource, narrative resource, standard specification A set of guidelines (community effort) suitable for use with any structured format for simulation experiments to identify the Minimal Information About a Simulation Experiment necessary to enable the reproducible simulation experiments. The Guidelines list the information that a modeller needs to provide to enable the execution and reproduction of a numerical simulation experiment, derived from a given set of quantitative models. MIASE is designed to help modelers and software tools to exchange their simulation settings and to foster collaboration. In 2011, he MIASE guidelines were accepted by researchers from 19 different institutes. simulation is used by: Simulation Experiment Description Markup Language
is listed by: Minimum Information for Biological and Biomedical Investigations
PMID:21552546 nlx_158097 SCR_003800 MIASE Guidelines 2026-08-15 11:22:38 2
TRANSFoRm
 
Resource Report
Resource Website
50+ mentions
TRANSFoRm (RRID:SCR_003888) TRANSFoRm organization portal, data or information resource, consortium, portal Project to develop a ''rapid learning healthcare system'' driven by advanced computational infrastructure that can improve both patient safety and the conduct and volume of clinical research in Europe. Three carefully chosen clinical ''use cases'' will drive, evaluate and validate the approach to the ICT (information and communications technology) challenges. The project will build on existing work at international level in clinical trial information models (BRIDG and PCROM), service-based approaches to semantic interoperability and data standards (ISO11179 and controlled vocabulary), data discovery, machine learning and electronic health records based on open standards (openEHR). TRANSFoRm will extend this work to interact with individual eHR systems as well as operate within the consultation itself providing both diagnostic support and support for the identification and follow up of subjects for research. The approach to system design will be modular and standards-based, providing services via a distributed architecture, and will be tightly linked with the user community. Four years of development and testing will end with a fifth year that will be dedicated to summative validation of the project deliverables in the Primary Care setting. In order to support patient safety in both clinical and research settings, significant ICT challenges need to be overcome in the areas of interoperability, common standards for data integration, data presentation, recording, scalability, and security., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. clinical, interoperability, healthcare system, healthcare, electronic health record, clinical data, metadata standard, aggregator has parent organization: King's College London; London; United Kingdom
is parent organization of: TRANSFoRm Clinical Data Integration Model
is parent organization of: TRANSFoRm Clinical Research Information Model
is parent organization of: TRANSFoRm Data Integration Models
European Union FP7 247787 THIS RESOURCE IS NO LONGER IN SERVICE nlx_158218 SCR_003888 Translational Research and Patient Safety In Europe 2026-08-15 11:22:37 60
PREDECT
 
Resource Report
Resource Website
1+ mentions
PREDECT (RRID:SCR_003883) PREDECT organization portal, data or information resource, consortium, portal Project that aims to create more appropriate in vitro platforms for target validation and drug discovery for breast, prostate and lung cancers. Laboratory platforms to validate whether target modulation would provide a clinical benefit are usually highly reductionist, often using long-established cell lines growing in 2 dimensions in vitro. These models do not reflect the complexity and heterogeneity of a tumor in situ, where biochemical pathways are wired with connections to the complex tumor environment provided by the stroma. PREDECT has the goal of comparing the pathological and molecular profiles of novel in vitro platforms with those of human tumors. Because obtention of clinical material presents both logistics and quality problems for ongoing and intense studies of target validation, PREDECT aims to use material from genetically engineered mouse models, and some advanced xenografts, whose pathology and molecular profiles closely match cohorts of human tumors. PREDECT hopes to provide more appropriate in vitro platforms both for target validation and subsequent preclinical studies which will replace a current cascade of tests which are poorly predictive of clinical activity. The project is expected to shift paradigms in cell biology as well as in preclinical target validation where it should permit greater predictivity of drug efficacy in patient cohorts. drug, oncology, drug development, basic research, in vitro, xenograft, breast, prostate, lung, pre-clinical, target validation, drug discovery is listed by: Consortia-pedia
is related to: Roche
is related to: Orion
is related to: sigma-tau
is related to: Janssen Research and Development
is related to: AbbVie
is related to: Institute of Cancer Research
is related to: Ecole Polytechnique Federale de Lausanne; Lausanne; Switzerland
is related to: VTT Technical Research Centre of Finland
is related to: University of Helsinki; Helsinki; Finland
is related to: University of Tartu; Tartu; Estonia
is related to: Biomedicum Genomics
is related to: Oncotest
is related to: Institute of Experimental Biology and Technology; Oeiras; Portugal
is related to: Cardiff University; Wales; United Kingdom
has parent organization: University of Helsinki; Helsinki; Finland
Innovative Medicines Initiative ;
EFPIA
nlx_158212 SCR_003883 Preclinical evaluation of drug efficacy in common solid tumours, Predect New models for preclinical evaluation of drug efficacy in common solid tumours 2026-08-15 11:22:43 8
PharmaCog
 
Resource Report
Resource Website
10+ mentions
PharmaCog (RRID:SCR_003878) PharmaCog organization portal, data or information resource, consortium, portal Project aiming to tackle bottlenecks in Alzheimer''''s disease research and drug discovery by developing and validating new tools to test candidate drugs for the treatment of symptoms and disease in a faster and more sensitive way. They will provide the tools needed to define more precisely the potential of a drug candidate, reduce the development time of new medicines and thus accelerate the approvals of promising new medicines. By bringing together databases of previously conducted clinical trials and combining the results from blood tests, brain scans and behavioral tests, the scientists will develop a ''''signature'''' that gives more accurate information on the progression of the disease and the effect of candidate drugs than current methods do. The scientists will conduct parallel studies in laboratory models, healthy volunteers and patients in order to better predict good new drugs as early as possible. This will enable them, for instance, to find out how memory loss in Alzheimer''''s disease can be simulated in healthy volunteers, for example with sleep deprivation or drugs that temporarily affect the memory, in order to test the effect of candidate-medicines early in the drug development process. drug, biomarker, drug discovery, model, tool development, drug development, medicine, clinical, pre-clinical, pharmacology, disease progression, cognitive impairment is listed by: Consortia-pedia
is related to: Merck
is related to: Janssen Research and Development
is related to: Roche
is related to: Eisai
is related to: Aix-Marseille University; Provence-Alpes-Cote d'Azur; France
is related to: Alzheimer Europe
is related to: French National Center for Scientific Research
is related to: Greek Association of Alzheimers Disease and Related Disorders
is related to: August Pi i Sunyer Biomedical Research Institute; Barcelona; Spain
is related to: National Institute of Health and Medical Research; Rennes; France
is related to: Mario Negri Institute for Pharmacological Research; Milan; Italy
is related to: University of Murcia; Murcia; Spain
is related to: Catholic University of the Sacred Heart; Milan; Italy
is related to: University of Foggia; Foggia; Italy
is related to: University of Genoa; Genoa; Italy
is related to: University of Perugia; Perugia; Italy
is related to: University of Verona; Verona; Italy
is related to: University of Leipzig; Saxony; Germany
is related to: Lille 2 University of Health and Law; Lille; France
is related to: University of Exeter; Exeter; United Kingdom
is related to: Innovative Concepts in Drug Development
is related to: AlzProtect
is related to: Qualissima
is related to: Exonhit Therapeutics
is related to: University of Bristol; Bristol; United Kingdom
is related to: European Medicines Agency
has parent organization: Lille 2 University of Health and Law; Lille; France
has parent organization: Alzheimer Europe
has parent organization: Aix-Marseille University; Provence-Alpes-Cote d'Azur; France
Innovative Medicines Initiative 115009;
EFPIA
nlx_158206 SCR_003878 Prediction of cognitive properties of new drug candidates for neurodegenerative diseases in early clinical development, Pharma-Cog 2026-08-15 11:22:43 13
Patients to Trials Consortium
 
Resource Report
Resource Website
Patients to Trials Consortium (RRID:SCR_003877) Patients2Trials Consortium service resource, portal, people resource, data or information resource, community building portal, consortium, organization portal A three-member pharmaceutical industry consortium that aims to provide a new platform to improve access to information about clinical trials for patients and providers. The platform aims to enhance the existing clinicaltrials.gov by providing more detailed and patient-friendly information about available trials and embedding a machine-readable target health profile to improve the ability of healthcare software to match individual health profiles with applicable clinical trials. Using clinicaltrials.gov as its foundation and Eli Lilly''''s Application Programming Interface (API), the consortium is focused on creating an open platform to make this data more amenable to patients and providers, as well as creating an opportunity to integrate a patient''''s electronic health record into the clinical trial matching service. This feature will allow patients to search for trials using their own Blue Button data. The following features are planned add-ons to clinicaltrials.gov: * Target Profile is a machine readable query, that can be executed against an electronic file (or record) with patient health data such as an Electronic Health Record (EHR), an Electronic Medical Record (EMR) or Personally Controlled Health Record (PCHR) * Augmented Content is public, IRB approved information about the study that has not been published on clinicaltrials.gov, and that is shared with / targeted for patients with a matching Target Profile. The following are the incremental goals of the consortium: * Advancement of the Lilly API platform to support read/write interaction and additional data objects and information. * The initial 3 sponsor organizations - Lilly, Pfizer and Novartis - will upload Target Profiles for a select set of clinical trials. A Target Profile is a machine interpretable description of the characteristics of patients who may qualify for that trial i.e. a query that can be executed against a patient''''s electronic health record or personal health record. Additionally, sponsors of clinical research studies will also be able to upload Augmented Content to the Lilly Platform to supplement information on clinicaltrials.gov with additional, patient-focused information about the study, e.g., a study brochure and practical information on how to contact investigational sites. * A matching service, developed by Corengi, will compare Target Profiles to a de-dentified personally controlled health record (PCHR), represented by patient''''s Blue Button Plus CCDA XML document. * Integration into a patient community platform from Avado for providing the patient PCHR and presenting the results of the match service. The patient will be able to explore the respective matching studies for additional information and next steps such as contacting a nearby investigator clinic or hospital. The first demo of the prototype was made available on June 2014, built on a database of anonymized patient health records from different clinical research studies sponsored by Lilly, Novartis, and Pfizer. Other website: http://portal.lillycoi.com/ drug development, tool development, clinical trial, clinical, patient profile, clinical research study, health record, platform, database uses: ClinicalTrials.gov
is listed by: Consortia-pedia
is related to: Pfizer Animal Genetics
is related to: Corengi
Open unspecified license, Public nlx_158205 SCR_003877 p2t consortium 2026-08-15 11:22:40 0
Chevron Corporation
 
Resource Report
Resource Website
1+ mentions
Chevron Corporation (RRID:SCR_003794) Chevron, CVX commercial organization An American multinational energy corporation headquartered in San Ramon, California, and active in more than 180 countries, that is engaged in every aspect of the oil, gas, and geothermal energy industries, including exploration and production; refining, marketing and transport; chemicals manufacturing and sales; and power generation. Chevron is one of the world's largest oil companies; as of 2013, it ranked third in the Fortune Global 500-2014 list of the world's largest companies. (Adapted from Wikipedia) oil, gas, geothermal energy, chemicals manufacturing, power generation Crossref funder ID: 100004366, grid.450626.3, ISNI: 0000 0004 0599 8199, Wikidata: Q319642, nlx_158090 https://ror.org/02jfa8730 SCR_003794 Chevron Corp., Chevron Corp 2026-08-15 11:22:38 1
Charles River Laboratories
 
Resource Report
Resource Website
10000+ mentions
Charles River Laboratories (RRID:SCR_003792) CRL biomaterial supply resource, material resource, organism supplier Commercial organism provider selling mice, rats and other model animals. American corporation specializing in a variety of pre-clinical and clinical laboratory services for the pharmaceutical, medical device and biotechnology industries. It also supplies assorted biomedical products and research and development outsourcing services for use in the pharmaceutical industry. (Wikipedia) RIN, Resource Information Network, pre-clinical, clinical, pharmaceutical, medical device, biotechnology, drug, drug discovery, RRID Community Authority is listed by: Resource Information Network
is related to: Oncotest
works with: International Mouse Strain Resource
SCR_013551, grid.452317.6, nlx_158088, nif-0000-00462, Wikidata: Q28974283 https://ror.org/01tasya06 SCR_003792 Charles River Laboratories Inc., Charles River, Charles River Laboratories International Inc. 2026-08-15 11:22:41 11510
BioReliance
 
Resource Report
Resource Website
50+ mentions
BioReliance (RRID:SCR_003791) BREL commercial organization Company that provides testing and manufacturing services to pharmaceutical and biopharmaceutical companies that span the product cycle from early pre-clinical development to licensed production. testing, manufacturing, pharmaceutical, biopharmaceutical has parent organization: Sigma-Aldrich
is parent organization of: BioReliance Biorepository
nlx_158085 SCR_003791 BioReliance Corporation, BioReliance Corp. 2026-08-15 11:22:37 62
Minimal Standard Terminology of Digestive Endoscopy - French
 
Resource Report
Resource Website
Minimal Standard Terminology of Digestive Endoscopy - French (RRID:SCR_003830) MSTDE-FRE ontology, data or information resource, controlled vocabulary Metathesaurus Version of Minimal Standard Terminology Digestive Endoscopy, French Translation, 2001 umls is listed by: BioPortal nlx_157484 SCR_003830 Minimal Standard Terminology of Digestive Endoscopy French 2026-08-15 11:22:38 0

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