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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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SNP HITLINK Resource Report Resource Website |
SNP HITLINK (RRID:SCR_013340) | SNP HITLINK | software application, software resource | Software program providing a useful pipeline to directly connect SNP data and linkage analysis program. SNP HiTLink currently supports the data from SNP chips provided by Affymetrix (Mapping 100k/500k array set, Genome-Wide Human SNP array 5.0/6.0) and Illumina (recently supported), carrying out typical linkage analysis programs of MLINK (FASTLINK/ LINKAGE package), Superlink, Merlin and Allegro. (entry from Genetic Analysis Software) | gene, genetic, genomic, bio.tools |
is listed by: Genetic Analysis Software is listed by: bio.tools is listed by: Debian |
nlx_154644, biotools:snp_hitlink | https://bio.tools/snp_hitlink | SCR_013340 | SNP HIgh-Throughput LINKage analysis system | 2026-09-12 01:02:48 | 0 | |||||||
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SGS Resource Report Resource Website |
SGS (RRID:SCR_013460) | SGS | software application, software resource | Software application (entry from Genetic Analysis Software) | gene, genetic, genomic, visualbasic, ms-windows, (95/98/00/nt) | is listed by: Genetic Analysis Software | nlx_154054 | SCR_013460 | 2026-09-12 01:02:49 | 0 | |||||||||
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AUTOSCAN Resource Report Resource Website 10+ mentions |
AUTOSCAN (RRID:SCR_013510) | AUTOSCAN | software application, software resource | A helper program to automate the tedious process of the creation of input files from genotype data of genome-wide scans (entry from Genetic Analysis Software) | gene, genetic, genomic, c and unix-shell (bourne), unix, (solaris/dec-unix) | is listed by: Genetic Analysis Software | nlx_154235 | SCR_013510 | 2026-09-12 01:02:49 | 20 | |||||||||
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Tree-Based Pipeline Optimization Tool Resource Report Resource Website 1+ mentions |
Tree-Based Pipeline Optimization Tool (RRID:SCR_017531) | TPOT | software resource, software toolkit | Software Python package to automate building of ML pipelines by combining flexible expression tree representation of pipelines with stochastic search algorithms such as genetic programming. | Automated, machine, learning, optimize, pipeline, genetic, programming | NIAID R01 AI117694 | Free, Available for download, Freely available | SCR_017532 | https://epistasislab.github.io/tpot/, https://github.com/EpistasisLab/tpot | SCR_017531 | Tree based Pipeline Optimization Tool | 2026-09-12 01:02:55 | 3 | ||||||
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Mutant Mouse Resource and Research Center - University of North Carolina Resource Report Resource Website 1+ mentions |
Mutant Mouse Resource and Research Center - University of North Carolina (RRID:SCR_016449) | UNC MMRRC, MMRRC UNC, MMRRC UNCCH | biomaterial supply resource, material resource | Center that is a mouse cryoarchive and distribution center, which incorporates research goals that synergize with and extend the value of the resource. The goals of the UNC Chapel Hill center are to streamline and improve operating procedures, establish a comprehensive cryoarchive, develop and disseminate computational tools for mouse genotyping, and examine the effect of paternal age and epigenetics on mutation rate. | mouse, cryogenic, mice, transgenic, knockout, genetic, mutant, mutation, epigenetics, research, animal | is organization facet of: Mutant Mouse Resource and Research Center | NIH Office of the Director U42 OD010924 | SCR_016449 | Mutant Mouse Resource and Research Center University of North Carolina, Mutant Mouse Resource and Research Center UNC, UNC Chapel Hill MMRRC, University of North Carolina Mutant Mouse Resource and Research Center, UNC Chapel Hill Mutant Mouse Resource and Research Center | 2026-09-12 01:02:54 | 3 | ||||||||
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UPR Sabana Seca Field Station Caribbean Primate Research Center Resource Report Resource Website |
UPR Sabana Seca Field Station Caribbean Primate Research Center (RRID:SCR_010134) | CPRC SSF, SSF CPRC | access service resource, core facility, service resource | Core facility that provides the following services: Necropsy. The Sabana Seca Field Station (SSFS) is the administrative headquarters for the Caribbean Primate Research Center, or CPRC. This area contains offices, a clinic, and laboratories for reproductive biology and bone densitometry, necropsy and maintenance buildings. It houses rhesus monkeys from the CS colony or from the CS genetic line. | autopsy, rhesus, monkey, primate, genetic, necropsy, bone, reproduction, colony |
is listed by: Eagle I has parent organization: University of Puerto Rico; Puerto Rico; USA |
NIH Office of the Director U42 OD021458 | nlx_156612 | SCR_010134 | University of Puerto Rico Caribbean Primate Research Center, Sabana Seca CPRC, CPRC Sabana Seca Field Station | 2026-09-12 01:03:28 | 0 | |||||||
|
coloc Resource Report Resource Website 50+ mentions |
coloc (RRID:SCR_026041) | software resource, software toolkit, source code | Software package to perform genetic colocalisation analysis of two potentially related phenotypes, to ask whether they share common genetic causal variant(s) in a given region.Colocalisation Tests of Two Genetic Traits. | Colocalisation tests, two genetic traits, genetic colocalisation analysis, genetic, colocalisation, two potentially related phenotypes, share common genetic causal variant, | Free, Available for download, Freely available, | https://CRAN.R-project.org/package=coloc | SCR_026041 | , coloc v5.2.3 | 2026-09-12 01:04:56 | 85 | |||||||||
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Columbia University Zuckerman Institute Molecular Tools Core Facility Resource Report Resource Website 1+ mentions |
Columbia University Zuckerman Institute Molecular Tools Core Facility (RRID:SCR_026201) | access service resource, core facility, service resource | Full service viral vector production core that provides investigators access to vector technology for preclinical studies and other basic research applications. Staff will provide expert consultation services for advanced study design, safe use of viral vector technologies and viral construction services for multiple viral vector types. | Virology, antibodies, genetic, access tool, viral vector production, viral construction services, multiple viral vector types, | Open | SCR_026201 | The Zuckerman Institute Molecular Tools Core, , Antibodies and Genetic Access Tools, Zuckerman Institute: Molecular Tools - Virology | 2026-09-12 01:04:59 | 2 | ||||||||||
|
MUGA Resource Report Resource Website 100+ mentions |
MUGA (RRID:SCR_014072) | data or information resource, data set | MUGA genotypes for 458 samples from the developing CC lines described in the February 2012 issue of Genetics. Genotypes for 168 reference strains that include biological and technical replicates for the the 8 CC founder strains and their F1 crosses are also provided. Genotype calls are those reported by Illumina. All results are provided as comma separated files with one row per marker. Each marker is identified by a probe name and its genomic position in NCBI Build 37. | genetic, genotype, reference strain, cc line |
is affiliated with: Mutant Mouse Resource and Research Center has parent organization: University of North Carolina at Chapel Hill; North Carolina; USA |
PMID:22345608 | SCR_014072 | 2026-09-12 01:03:47 | 267 | ||||||||||
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Vermont University Genetics Network Bioinformatics Core Facility Resource Report Resource Website 1+ mentions |
Vermont University Genetics Network Bioinformatics Core Facility (RRID:SCR_017686) | access service resource, core facility, service resource | Core provides expertise in biostatistics, microarray data analysis, proteome informatics, next generation sequencing data analysis, functional analysis, database development and information technology, including data storage infrastructure and high performance computing. Working closely with VGN Proteomics Facility, offers investigators experimental design consultations, comprehensive data analysis, data management and publishing, and manuscript and grant support. Core personnel also engage in teaching and training activities for data analysis and compute resources necessary for VGN network investigators. Our goal is to provide network researchers with bioinformatics expertise. | Vermont, genetic, network, bioinformatic, core, data, analysis, microarray, proteome, next, generation, sequencing, functional, database, core | Open | SCR_017707, ABRF_8 | SCR_017686 | Vermont Genetics Network Bioinformatics Core | 2026-09-12 01:04:00 | 1 | |||||||||
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Steve and Cindy Rasmussen Institute for Genomic Medicine Clinical Laboratory Core Facility at Nationwide Children�s Hospital Resource Report Resource Website 1+ mentions |
Steve and Cindy Rasmussen Institute for Genomic Medicine Clinical Laboratory Core Facility at Nationwide Children�s Hospital (RRID:SCR_017840) | IGM | access service resource, core facility, service resource | Core performs and analyzes integrated clinical genomic, molecular, microarray, FISH, and cytogenetic analyses to diagnose broad range of inherited diseases and cancer. Serves as centralized clinical testing laboratory for Children Oncology Group leukemia, Wilms tumor, medulloblastoma, and rhabdomyosarcoma studies. Emphasizes collaborative interactions between clinicians, physician-scientists, and basic science investigators to quickly transition cutting edge research results into cutting edge diagnostics, using technology platforms. Services include Whole Exome Sequencing (WES),cytogenetic chromosome analysis,Fluorescence in situ Hybridization,Chromosomal microarray analysis,Molecular Genetic Testing - Inherited Diseases,Molecular Genetic Testing - Cancer. | Clinical, genomic, molecular, microarray, FISH, cytogenetic, inherited, disease, cancer, testing, children, oncology, leukemia, medulloblastoma, rhadomyosarcoma, diagnosis, whole, exome, sequencing, chromosomal, microarray, analysis, molecular, genetic, service, core, ABRF | is listed by: ABRF CoreMarketplace | Restricted | ABRF_631 | SCR_017840 | Institute for Genomic Medicine Clinical Laboratory | 2026-09-12 01:04:03 | 8 | |||||||
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Albert Einstein College of Medicine Molecular Cytogenetics Core Facility Resource Report Resource Website |
Albert Einstein College of Medicine Molecular Cytogenetics Core Facility (RRID:SCR_017815) | MC | access service resource, core facility, service resource | Core provides tools for preparation of human and murine samples suitable for molecular genetic and cytogenetic analysis of entire genome. These tools include establishment of EBV transformed cell lines; isolation of DNA and mRNA from variety of tissue culture samples as well as primary biopsies; preparation of metaphase chromosomes suitable for fluorescence in situ hybridization (FISH) and Spectral Karyotyping (SKY) or whole chromosome paints for human and mouse genome. Core personnel is trained to hybridize commercial probes and to designed locus specific probes for regions of interest to investigators. All probes are custom designed and in house generated. | Molecular, cytogenetic, preparation, human, murine, sample, genetic, analysis, genome, DNA, mRNA, isolation, metaphase, chromosome, fluorescence, in situ, hybridization, spectra, kayotyping, commercial, design, locus, specific, probe, service, core, ABRF | is listed by: ABRF CoreMarketplace | Open | ABRF_580 | SCR_017815 | Molecular Cytogenetics Core Albert Einstein College of Medicine | 2026-09-12 01:04:02 | 0 | |||||||
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Northwestern University High Throughput Analysis Laboratory Core Facility Resource Report Resource Website 1+ mentions |
Northwestern University High Throughput Analysis Laboratory Core Facility (RRID:SCR_017879) | NU-HTA | access service resource, core facility, service resource | Core provides expertise and resources for large scale biology. Helps to set up, run, gather data and perform analysis in drug discovery research, biochemistry, cell and organismal biology, functional genomic screening, and synthetic genetic. Works with proteins, nucleic acids, small model organisms, and microbial strains. Provides tissue culture,produces and uses lentivirus particles, screens compound libraries, does experiments for investigators,generates preliminary data to figure out if idea is workable, discusses project development. Services include Macromolecular binding, biochemical, and cell-based assays,High content screening with widefield or confocal optics,Nanoliter liquid handling up to 1536-well density,Whole-plate kinetic assays (ion currents, GPCR signaling),Compound library screening,CRISPR/Cas9 screening (multiplexed libraries),Analysis of large data sets,Fluorescence Thermal Shift assay (measures protein melting),Complex liquid handling work flows. | Collect, perform, analysis, drug, discovery, biochemistry, cell, organisational, biology, functional, genomic, screening, synthetitc, genetic, data, assay, library, CRISPR, Cas9, kinetic, fluorescence, shift, protein, melting, core, service |
is listed by: ABRF CoreMarketplace has parent organization: Northwestern University; Illinois; USA |
Open | SCR_017771, ABRF_724 | https://coremarketplace.org/?FacilityID=724&citation=1 | SCR_017879 | Northwestern Highthroughput Analysis Laboratory | 2026-09-12 01:04:04 | 3 | ||||||
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Cell Model Passports Resource Report Resource Website 10+ mentions |
Cell Model Passports (RRID:SCR_027682) | catalog, data or information resource, database | Hub for clinical, genetic and functional datasets of preclinical cancer models.Provides details of cell model relationships, patient and clinical information, as well as access to associated genetic and functional datasets. Passports database contains curated details and standardized annotation for cell models, including cancer organoid cultures. Users can navigate database via tissue, cancer-type, genetic feature and data availability to select model. REST-API provides programmatic data access and exploration. | clinical, genetic, functional, datasets, preclinical cancer models, | has parent organization: Wellcome Trust Sanger Institute; Hinxton; United Kingdom | Wellcome Sanger Institute ; Wellcome Trust |
PMID:30260411 | Free, Freely available | SCR_027682 | 2026-09-12 01:05:33 | 15 | ||||||||
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PacGenomics Resource Report Resource Website |
PacGenomics (RRID:SCR_027700) | commercial organization, service resource | Company provides medical laboratory services, specializing in genetic and genomic testing. | genetic, genomic, testing services, | SCR_027700 | 2026-09-12 01:05:34 | 0 |
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