Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Critical Path Initiative Resource Report Resource Website 1+ mentions |
Critical Path Initiative (RRID:SCR_012967) | CPI | data or information resource, portal | The FDA''s national strategy for transforming the way FDA-regulated products--human drugs, biological products, medical devices, veterinary drugs, foods, and cosmetics--are developed, evaluated, manufactured, and used. Specific key areas of focus identified by FDA experts and the public: * Developing better evaluation tools like biomarkers and new assays * Streamlining clinical trials by modernizing the clinical trial sciences to make trials safe and efficient * Harnessing bioinformatics (e.g., moving from a paper-based to electronic environment for exchanging information and overseeing the safety of FDA-regulated products) * Moving manufacturing into the 21st Century, using tools such as process analytic technology and nanotechnology * Developing products to address urgent public health needs, including, improved antimicrobial testing, new animal models to test bioterrorism countermeasures and vaccine testing * Focusing on at-risk populations, such as pediatrics | medical product, drug, biological product, medical device, veterinary drug, food, cosmetic, develop, evaluate, manufacture |
is related to: ACTTION is related to: JDRF Artificial Pancreas Project Consortium has parent organization: U.S. Food and Drug Administration |
U.S. Food and Drug Administration | nif-0000-30394 | http://www.fda.gov/oc/initiatives/criticalpath/whitepaper.pdf | SCR_012967 | Critical Path | 2026-09-12 01:01:01 | 1 | ||||||
|
BC Fisheries Living Gene Bank Resource Report Resource Website |
BC Fisheries Living Gene Bank (RRID:SCR_000917) | biomaterial supply resource, material resource, tissue bank | THIS RESOURCE IS NO LONGER IN SERVICE, documented August 22, 2016. An ichtyological gene bank with data from fisheries in British Columbia, Canada. | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_17177 | SCR_000917 | 2026-09-12 01:01:21 | 0 | |||||||||||
|
Current Research Information System Resource Report Resource Website 1+ mentions |
Current Research Information System (RRID:SCR_001441) | CRIS | data or information resource, database | A database of documentation and reporting for ongoing agricultural, food science, human nutrition, and forestry research, education and extension activities for the United States Department of Agriculture; with a focus on the National Institute of Food and Agriculture (NIFA) grant programs. Projects are conducted or sponsored by USDA research agencies, state agricultural experiment stations, land-grant universities, other cooperating state institutions, and participants in NIFA-administered grant programs, including Small Business Innovation Research and Agriculture and Food Research Initiative. | agricultural, food science, human nutrition, nutrition, forestry research, education, data set |
is listed by: NIDDK Information Network (dkNET) has parent organization: USDA National Institute of Food and Agriculture |
Free, Freely Available | nlx_152704 | http://cris.csrees.usda.gov/ | SCR_001441 | Current Research Information System (CRIS), U.S. Department of Agriculture Current Research Information System | 2026-09-12 01:01:22 | 5 | ||||||
|
National Marine Mammal Tissue Bank Resource Report Resource Website |
National Marine Mammal Tissue Bank (RRID:SCR_013224) | biomaterial supply resource, material resource, tissue bank | Not yet vetted by NIF curator | nlx_16316 | SCR_013224 | 2026-09-12 01:02:10 | 0 | ||||||||||||
|
I3-CRB: Interoperable IT Infrastructure for Biological Resources Centres / Biobanks - France Resource Report Resource Website |
I3-CRB: Interoperable IT Infrastructure for Biological Resources Centres / Biobanks - France (RRID:SCR_006991) | I3-CRB | biomaterial supply resource, material resource | Project to improve data and sample exchanges and to facilitate large scale analysis of data by improving interoperability of French Biological Resources Centres (BRC or biobanks) IT systems and biological databases. The work done in this project will be linked to other national (IBiSA, ANR, R��seau des Biobanques, Club 3C-R), European (BBMRI, ELIXIR) or international project (P3G). In the preliminary phase (2009-2010) I3-CRB has developed a directory of French Biological Resource Centres / Biobanks where one may register their French BRC or perform a search across all of them. Detail by overall data or kingdom is provided as well as many filtering options. Access to biological samples is provided by the participating BRC''''s. Biological Resources Centres (BRC or biobanks) collect annotated biological samples from various sources (human, animal, plant, bacteria...). The type of samples depends on the collection and the associated thematic (DNA, proteins, cells, tissues, blood, serum, organisms...). The aims of these centers are to collect, to store, to transform and to distribute the biological samples. They constitute a vital infrastructure for life science and health research. Goals of the French Biobanks/Biological Resource Centres: * List French biobanks and their biological collections * Improve sample exchanges * Improve the international visibility of the French biological collections MeSH terms have been integrated: Domains, diseases, and location of the disease (Anatomy). Collections/species are based on NCBI Taxonomy. | plant, animal, human, micro-organism, microorganism, bacteria, dna, protein, cell, tissue, blood, serum, organism, research |
is listed by: One Mind Biospecimen Bank Listing is related to: MeSH has parent organization: University of Lyon; France |
GIS IBiSA | Varying: Access to biological samples is provided by the participating BRC''''s., The community can contribute to this resource | nlx_36068 | SCR_006991 | Infrastructure Informatique Interop��rable pour les CRB | 2026-09-12 01:02:36 | 0 | ||||||
|
Cooperative Study Group for Autoimmune Disease Prevention Resource Report Resource Website |
Cooperative Study Group for Autoimmune Disease Prevention (RRID:SCR_006803) | CSGADP | knowledge environment, resource | Collaborative network of investigators with a focus on prevention of autoimmune disease, defined as halting the development of autoimmune disease prior to clinical onset by means other than global immunosuppression, and an emphasis on Type 1 diabetes. Its mission is to engage in scientific discovery that significantly advances knowledge for the prevention and regulation of autoimmune disease. The specific goals enunciated in pursuit of this mission are: * To create improved models of disease pathogenesis and therapy to better understand immune mechanisms that will provide opportunities for prevention strategies * To use these models as validation platforms with which to test new tools applicable to human studies * To encourage core expertise and collaborative projects designed for rapid translation from animal to human studies, emphasizing the development of surrogate markers for disease progression and/or regulation which can be utilized in the context of clinical trials | prevention, clinical, immune, model, disease pathogenesis, therapy |
is listed by: NIDDK Information Network (dkNET) is listed by: NIDDK Research Resources |
Type 1 diabetes, Diabetes, Autoimmune disease | NIAID ; NIDDK ; NICHD ; NIH Office of Research on Womens Health ; Juvenile Diabetes Research Foundation International |
nlx_152797 | SCR_006803 | 2026-09-12 01:02:36 | 0 | |||||||
|
FMAToolbox Resource Report Resource Website 50+ mentions |
FMAToolbox (RRID:SCR_015533) | data analysis software, data processing software, software application, software resource | Matlab toolbox used to help analyze electrophysiological and behavioral data recorded from freely moving animals. | electrophysiology software, behavioral software, freely moving animal, matlab |
uses: MATLAB is listed by: SourceForge |
Available for download, Acknowledgement requested | http://www.buzsakilab.com/content/PDFs/HasanJNeuroscMeth2006.pdf | SCR_015533 | FMA Toolbox, Freely Moving Animal Toolbox | 2026-09-12 12:58:27 | 65 | ||||||||
|
HIV Molecular Immunology Database Resource Report Resource Website 1+ mentions |
HIV Molecular Immunology Database (RRID:SCR_002893) | HIV Molecular Immunology Database | data or information resource, database | An annotated, searchable collection of HIV-1 cytotoxic and helper T-cell epitopes and antibody binding sites, plus related tools and information. The goal of this database is to provide a comprehensive listing of defined HIV epitopes. These data are also printed in the HIV Molecular Immunology compendium, which is updated yearly and provided free of charge to scientific researchers, both by online download and as a printed copy. The data included in this database are extracted from the HIV immunology literature. HIV-specific B-cell and T-cell responses are summarized and annotated. Immunological responses are divided into three sections, CTL (CD8+), T helper (CD4+), and antibody. Within these sections, defined epitopes are organized by protein and binding sites within each protein, moving from left to right through the coding regions spanning the HIV genome. We include human responses to natural HIV infections, as well as vaccine studies in a range of animal models and human trials. Responses that are not specifically defined, such as responses to whole proteins or monoclonal antibody responses to discontinuous epitopes, are summarized at the end of each protein sub-section. Studies describing general HIV responses to the virus, but not to any specific protein, are included at the end of each section. The annotation includes information such as cross-reactivity, escape mutations, antibody sequence, TCR usage, functional domains that overlap with an epitope, immune response associations with rates of progression and therapy, and how specific epitopes were experimentally defined. Basic information such as HLA specificities for T-cell epitopes, isotypes of monoclonal antibodies, and epitope sequences are included whenever possible. All studies that we can find that incorporate the use of a specific monoclonal antibody are included in the entry for that antibody. A single T-cell epitope can have multiple entries, generally one entry per study. Finally, tables and maps of all defined linear epitopes relative to the HXB2 reference proteins are provided. Alignments of CTL, helper T-cell, and antibody epitopes are available through the search interfaces. Only responses to HIV-1 and HIV-2 are included in the database. | cytotoxic t cell, cytotoxic t lymphocyte, helper t-cell, antibody, binding site, epitope, t cell epitope, human immunodeficiency virus, immunology, molecule, genome, protein, alignment, b-cell, t-cell, annotation, ctl, t helper, coding region, cross-reactivity, escape mutation, antibody sequence, tcr usage, functional domain, immune response, progression, therapy | has parent organization: HIV Databases | Human immunodeficiency virus | NIAID | nif-0000-02965 | http://hiv-web.lanl.gov/immunology/ | SCR_002893 | Human Immunodeficiency Virus Molecular Immunology Database | 2026-09-12 01:01:27 | 2 | |||||
|
Drug Related Gene Database Resource Report Resource Website 1+ mentions |
Drug Related Gene Database (RRID:SCR_003330) | DRG | data or information resource, database | Gene expression data from published journal articles that test hypotheses relevant to neuroscience of addiction and addictive behavior. Data types include effects of particular drug, strain, or knock out on particular gene, in particular anatomical region. Focuses on gene expression data and exposes data from investigations using DNA microarrays, polymerase chain reaction, immunohistochemistry and in-situ hybridizations. Data are available for query through NIF interface.Data submissions are welcome. | drug of abuse, gene expression, brain region, brain, american recovery and reinvestment act, brain, dna microarray, microarray, addiction |
uses: PubMed is listed by: NIF Data Federation is related to: Integrated Manually Extracted Annotation has parent organization: Neuroscience Information Framework |
NIDA | Free, Freely available | nif-0000-37443 | https://confluence.crbs.ucsd.edu/login.action?os_destination=%2Fpages%2Fviewpage.action%3FspaceKey%3DNIF%26title%3DDRG&permissionViolation=true | SCR_003330 | DRG Database, Drug Dependent Gene Database | 2026-09-12 01:01:28 | 2 | |||||
|
NIRx NIRS Neuroimaging Resource Report Resource Website 10+ mentions |
NIRx NIRS Neuroimaging (RRID:SCR_002491) | instrument supplier, material resource | Commercial technology solutions for NIRS neuroscience imaging applications. | hardware, image reconstruction, nirs, fnir, optical imaging, physiological recording, tomography, neuroimaging, adult, infant, child, imaging |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is parent organization of: NIRStar is parent organization of: NIRSPORT |
Restricted | nlx_155886 | http://www.nitrc.org/projects/nirx | SCR_002491 | NIRx Optical Neuroimaging | 2026-09-12 01:03:13 | 21 | |||||||
|
Richard M. Lucas Center for Imaging Resource Report Resource Website 1+ mentions |
Richard M. Lucas Center for Imaging (RRID:SCR_001406) | Lucas Center, CAMRT | biomedical technology research center, training resource | Biomedical technology research center that develops innovative technologies in five core research areas of magnetic resonance imaging and spectroscopy (MRI/MRS): # image reconstruction, fast imaging and radiofrequency (RF) pulse design methods, # R hardware development, # body imaging methods, # neuroimaging methods. # MR spectroscopy methods. In each of these areas, they capitalize on the long-standing, successful partnership and extensive experience in Stanford's Radiology and Electrical Engineering departments to improve and expand imaging technology for use in basic research and clinical care, and to provide cutting edge opportunities to the extramural community for biomedical research with MRI. Over its more than 18 years of existence, CAMRT has been motivated by and has served a wide base of extramurally sponsored collaborators and service users from leading medical and research institutions. Examples of collaborative projects are the development of real-time functional MRI biofeedback methods for neuroscience and clinical applications such as pain remediation, development of methods to mitigate metal artifacts in musculoskeletal imaging, development of novel RF pulses for many applications, and studies of breast cancer with efficient MRS methods. | magnetic resonance imaging, spectroscopy, x-ray imaging, ct imaging, imaging, neuroimaging | has parent organization: Stanford University School of Medicine; California; USA | Brain disorder, Cancer, Stroke, Heart disease | NIBIB | Free, Freely Available | nlx_152629 | http://med.stanford.edu/rsl/about/lucas.html | SCR_001406 | Lucas Center for Imaging, Center for Advanced Magnetic Resonance Technology | 2026-09-12 01:03:11 | 1 | ||||
|
Southwestern NMR Center for In Vivo Metabolism Resource Report Resource Website 1+ mentions |
Southwestern NMR Center for In Vivo Metabolism (RRID:SCR_001429) | Southwestern NMR Center | biomedical technology research center, training resource | Biomedical technology research center that develops and applies new methods for analysis of metabolic networks in intact tissues, animals and human patients. The importance of understanding abnormal metabolism in common diseases such as cancer, diabetes and heart disease has long been appreciated. Because of constraints in technology, however, much of this research has been conducted in isolated systems where clinical relevance may be uncertain. Progress in magnetic resonance technology provides a foundation for major advances towards new ways of imaging metabolism in patients. These new techniques offer the advantage of imaging biochemical pathways without radiation. The focus of this Resource is to bring these technologies to a level where clinical research is feasible through the development of new MR contrast agents, NMR spectroscopy at high fields, and imaging of hyperpolarized 13C. | metabolic network, tissue, imaging, metabolism, nuclear magnetic resonance, magnetic resonance, nuclear magnetic resonance spectroscopy | has parent organization: University of Texas Southwestern Medical Center; Texas; USA | Cancer, Diabetes, Heart disease | NIBIB 5P41EB015908-28 | Free, Freely Available | nlx_152653 | SCR_001429 | Southwestern NMR Center for in vivo Metabolism - NIBIB | 2026-09-12 01:03:11 | 1 | |||||
|
Johns Hopkins University - University of Maryland Diabetes Research Center Molecular and Translational Genomics Core Resource Report Resource Website |
Johns Hopkins University - University of Maryland Diabetes Research Center Molecular and Translational Genomics Core (RRID:SCR_015116) | access service resource, core facility, service resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on November 6,2024. Core that provides services in genotyping, sequencing, biobanks, and genetic epidemiology. It also offers access to the Amish exome variant database, basic molecular services, and viral vector construction and development. | genotyping service, sequencing service, biobank access, basic molecular service, vector construction, vector development |
is listed by: NIDDK Information Network (dkNET) has parent organization: Johns Hopkins University - University of Maryland Diabetes Research Center is organization facet of: Johns Hopkins University - University of Maryland Diabetes Research Center |
Diabetes | NIDDK P30DK079637 | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_015116 | 2026-09-12 01:03:50 | 0 | ||||||||
|
Johns Hopkins University - University of Maryland Diabetes Research Center Integrated Physiology Core Resource Report Resource Website |
Johns Hopkins University - University of Maryland Diabetes Research Center Integrated Physiology Core (RRID:SCR_015088) | access service resource, core facility, service resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 24,2024. Core consisting of several subcores: Ligand Assay and Biomarker Subcore (offers services in Multiplex Assay Detection Systems, Comprehensive Laboratory Animal Monitoring System (CLAMS), and Body Composition), Rodent Physiology and Behavioral Analysis Subcore, and Glucose Metabolism Analysis Subcore (provides services in Dynamic Physiologic Testing). | physiology, rodent physiology, behavioral analysis, glucose metabolism, assays |
is listed by: NIDDK Information Network (dkNET) is organization facet of: Johns Hopkins University - University of Maryland Diabetes Research Center |
Diabetes | NIDDK P30DK079637 | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_015088 | 2026-09-12 01:03:49 | 0 | ||||||||
|
Indiana O'Brien Center for Advanced Microscopic Analysis Intravital Microscopy Core Resource Report Resource Website |
Indiana O'Brien Center for Advanced Microscopic Analysis Intravital Microscopy Core (RRID:SCR_015273) | access service resource, core facility, resource, service resource | Core facility which primarily provides service, animal models, consultation training and intravital optical microscopy customized to kidney and urologic research. It also develops and characterizes novel biosensor probes and in vivo delivery methods for these probes, as well as intravital multiphoton microscopy technologies. | imaging core, imaging facility, imaging core facility, animal model |
is listed by: NIDDK Information Network (dkNET) has parent organization: Indiana O'Brien Center for Advanced Microscopic Analysis has parent organization: Indiana University School of Medicine; Indiana; USA is organization facet of: Indiana O'Brien Center for Advanced Microscopic Analysis |
NIDDK P30DK079312 | Available to the research community | SCR_015273 | 2026-09-12 01:03:53 | 0 | |||||||||
|
Washington University Digestive Diseases Research Core Center Advanced Imaging and Tissue Analysis Core Resource Report Resource Website |
Washington University Digestive Diseases Research Core Center Advanced Imaging and Tissue Analysis Core (RRID:SCR_015254) | access service resource, core facility, resource, service resource | Core facility which provides comprehensive histologic and immunohistochemical support, advanced microscopic imaging and image analysis services to digestive disease researchers. The Tissue Analysis Component performs animal and human tissue embedding, sectioning, routine and special staining, and immunohistochemical analyses, and provides training in all services while the Advanced Image Analysis Component provides access to and training in routine light, fluorescent and inverted fluorescent microscopy and quantitative image analysis. | imaging core, imaging services, tissue imaging, advanded imaging, image analysis |
is listed by: NIDDK Information Network (dkNET) has parent organization: Washington University School of Medicine in St. Louis; Missouri; USA has parent organization: Washington University Digestive Diseases Research Core Center is organization facet of: Washington University Digestive Diseases Research Core Center |
digestive disease | NIDDK P30DK052574 | Available to the research community | SCR_015254 | 2026-09-12 01:03:53 | 0 | ||||||||
|
Yale Cooperative Center of Excellence in Hematology Cell Preparation and Analysis Core Resource Report Resource Website |
Yale Cooperative Center of Excellence in Hematology Cell Preparation and Analysis Core (RRID:SCR_015317) | access service resource, core facility, resource, service resource | Core facility which provides emerging technologies in hematology and relevant training for junior investigators. Its services include in vitro hematopoiesis assays services, automated complete blood counts, morpholoigcal analyses, CRISPR based genomic editing, and FACsorting and analysis. | hematology core facility, cell preparation core, cell analysis core |
is listed by: NIDDK Information Network (dkNET) has parent organization: Yale School of Medicine; Connecticut; USA has parent organization: Yale Cooperative Center of Excellence in Hematology is organization facet of: Yale Cooperative Center of Excellence in Hematology |
NIDDK U54DK106857 | Available to the research community | SCR_015317 | 2026-09-12 01:03:54 | 0 | |||||||||
|
Pennington Biomedical Research Center Nutrition and Obesity Research Center Animal Models and Phenotyping Core Resource Report Resource Website |
Pennington Biomedical Research Center Nutrition and Obesity Research Center Animal Models and Phenotyping Core (RRID:SCR_015443) | access service resource, core facility, resource, service resource | Core that is comprised of the Animal Models Subcore and Animal Phenotyping Subcore. The former provides expertise and services for design and construction of transgenes, ES cell transfection and screening, pronuclear injection, and cryopreservation. The latter provides expertise and services for metabolism, physical activity, body composition, and behavioral research. | animal model, animal phenotyping, energy metabolism, body composition |
is listed by: NIDDK Information Network (dkNET) has parent organization: Pennington Biomedical Research Center has parent organization: Pennington Biomedical Research Center Nutrition and Obesity Research Center is organization facet of: Pennington Biomedical Research Center Nutrition and Obesity Research Center |
Obesity | NIDDK P30DK072476 | Available to the research community | SCR_015443 | 2026-09-12 01:03:56 | 0 |
Can't find your Tool?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.
Welcome to the dkNET Resources search. From here you can search through a compilation of resources used by dkNET and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that dkNET has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on dkNET then you can log in from here to get additional features in dkNET such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
If you are logged into dkNET you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the facets that you can filter the data by.
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant U24DK097771.
Email: info_at_ dknet.org
