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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
https://bioscience.lonza.com/lonza_bs/JP/en/Transfection/p/000000000000276883/4D-Nucleofector-X-Unit
One of four functional modules of 4D-Nucleofector System. It supports Nucleofection of various cell numbers cells in different formats.
Proper citation: Lonza: 4D Nucleofector X Unit (RRID:SCR_023155) Copy
https://www.thermofisher.com/order/catalog/product/50143210?SID=srch-srp-50143210
Storage used for high capacity random access storage (210 SBS microplates) at ambient conditions. The Cytomat 10 Hotel (PH) offers multiple transfer positions, dual access point (DAP) and as combined benchtop-under bench solution, it allows flexible placement within the laboratory.
Proper citation: Thermo Fisher: Cytomat 10 Hotel Ambient Storage (RRID:SCR_023273) Copy
https://www.medicalexpo.com/ja/prod/erma/product-68401-922563.html
Automatic cell counting instrument. Used to count blood cells.
Proper citation: ERMA: Automatic blood cell counter PCE-210N (RRID:SCR_023148) Copy
https://www.leicabiosystems.com/us/histology-equipment/cryostats/leica-cm3050-s/
Instrument designed for cryosectioning in biomedical, neuro-anatomical and pharmaceutical research.
Proper citation: Leica: CM3050 S Research Cryostat (RRID:SCR_016844) Copy
https://bionanogenomics.com/wp-content/uploads/2017/01/30047-Irys-User-Guide.pdf
System by BioNano Genomics ( formerly BioNanomatrix) which provides optical next generation mapping (NGM). Used for sequence assembly and structural variation analysis. Provides Scaffold Bionano genome mapping data with sequencing data to improve assembly contiguity, reduce sequencing coverage needed, and automatically correct errors in sequencing based assemblies.
Proper citation: BioNano: Irys system (RRID:SCR_016754) Copy
https://link.springer.com/article/10.1007%2Fs00424-017-2067-y
Integrated circuit device used as tool for amperometry measurement as replacement of conventional carbon fiber microelectrode. Surface modified structures with SU 8 microwells increases life span of each individual device and achieves single cell measurement efficiency by trapping cells inside microwells.
Proper citation: Surface Modified Amperometry CMOS IC (RRID:SCR_017082) Copy
https://www.olympus-global.com/news/2016/nr160405fv3000e.html
FV3000 is a laser scanning confocal microscope system that captures high-resolution, high-contrast images by scanning samples point by point, enabling precise 3D fluorescence imaging. The system supports inverted and upright configurations and accommodates various objectives with magnifications ranging from 1.25× to 100×, including oil, silicone, and dry lenses, which allows imaging of both macro and micro-scale samples. It is equipped with multiple laser lines for excitation, including 405 nm, 488 nm, 561 nm, and 640 nm, as well as additional lines in some configurations (445 nm, 514 nm, 594 nm, 630 nm), enabling the use of several fluorophores simultaneously. On the detection side, the microscope uses high-sensitivity photomultiplier tube detectors, including GaAsP PMTs and multi-alkali PMTs.
Proper citation: Olympus: FluoView FV3000 Confocal Laser Scanning Microscope (RRID:SCR_017015) Copy
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6301786/
Device to control spatial and temporal variations in oxygen tensions to better replicate in vivo biology. Consists of three parallel connected tissue chambers and oxygen scavenger channel placed adjacent to these tissue chambers. Provides consistent control of spatial and temporal oxygen gradients in tissue microenvironment and can be used to investigate important oxygen dependent biological processes present in cancer, ischemic heart disease, and wound healing.
Proper citation: Microfluidic device to attain high spatial and temporal control of oxygen (RRID:SCR_017131) Copy
http://www.open-ephys.org/pulsepal
Open source pulse train generator that allows users to create and trigger software defined trains of voltage pulses with high temporal precision. Generates precisely timed pulse sequences for use in research involving electrophysiology or psychophysics.
Proper citation: Open Ephys: Pulse Pal (RRID:SCR_017203) Copy
https://www.keyence.co.jp/products/microscope/fluorescence-microscope/bz-x700/models/bz-x710/
All in one fluorescence microscope BZ-X710 by Keyence, Japan.
Proper citation: Keyence: BZ X-710 fluorescent microscope (RRID:SCR_017202) Copy
https://usermanual.wiki/Document/MJResearchPTC150ThermalCycler.439819317/view
Mini Thermal Cycler PCR is compact thermal scanner, catalog number PTC-150 Cycler with Hot Bonnet heated lid for oil free cycling by MJ Research.
Proper citation: Marshall Scientific: PTC-150 MiniCycler (RRID:SCR_017214) Copy
Femto Pulse System separates large molecular weight DNA fragments and detects nucleic acids into femtogram range.Fragment analyzer that provides pulsed field power supply which allows large molecular weight DNA fragments to be separated and nucleic acids detected into femtogram range. Ability to separate high molecular weight DNA up to 165 kb and detect nucleic acids down to 50 fg per uL input concentration makes system ideal for long-read NGS QC, gDNA, small RNA, or cfDNA analysis from low concentration samples.
Proper citation: Agilent: Femto Pulse System (RRID:SCR_018058) Copy
https://www.thermofisher.com/order/catalog/product/3730S#/3730S
Medium to high throughput genetic analyzer that performs DNA fragment analysis applications such as microsatellites, AFLP, SNP analysis, mutation detection and traditional DNA sequencing. Upgradeable to 96 capillaries.
Proper citation: Thermo Fisher: Applied Biosystems: 3730 Genetic Analyzer (RRID:SCR_018052) Copy
Refridgerated centrifuge with 18 place capacity rotor that accomdates low to medium capacity in 1.5 or 2.0 mL tubes and Microtainer. Speed allows for standard molecular biology applications. Compact size and quiet operation.
Proper citation: Eppendorf: 5418 R Centrifuge (RRID:SCR_018050) Copy
Flow cytometry system that performs reliable performance, accuracy, and ease-of-use for clinical diagnostic services. System has 10 color capability, optical enhancements, and 4-3-3 configuration deliver high sensitivity and resolution for accurate results.
Proper citation: BD Biosciences: FACSCanto Flow Cytometer (RRID:SCR_018055) Copy
MRI system that performs preclinical and molecular MR imaging. MRI CryoProbe technology combined with ultra high field USR magnets deliver high spatial resolution in-vivo. Any small animal MR imaging application in life science, biomedical and preclinical research can be conducted.
Proper citation: Bruker: 9.4T Biospec Biospec Magnetic Resonance Imaging (RRID:SCR_018054) Copy
https://en.mgitech.cn/Uploads/Temp/file/20191231/5e0b086c38d24.pdf
Desktop sequencer developed by BGI. Using DNA nanoball and combinational probe anchor synthesis developed from Complete Genomics sequencing technologies, it generates short reads at large scale. BGI/MGI Sequencer.
Proper citation: BGI: BGISEQ-500 (RRID:SCR_017979) Copy
https://en.mgitech.cn/products/instruments_info/5/
Sequencer can generate 1-6Tb of high quality data per day, for wide range of applications including Whole Genome Sequencing, Deep Exome Sequencing, Epigenome Sequencing, Transcriptome Sequencing, and targeted panel projects. Powered by DNBSEQTM Technology, DNBSEQ-T7 makes sequencing more efficient and productive with advances in biochemical, fluidics, and optical systems. Detection and characterization of copy number variants based on whole-genome sequencing by MGI platforms.
Proper citation: MGI: DNBSEQ-T7 (RRID:SCR_017981) Copy
https://www.mscience.com.au/upload/pages/pacbio/pacbio_rs_ii_brochure.pdf
Sequencer by Pacific Biosciences. System allows scientists to generate finished genome assemblies, reveal and understand epigenomes, and characterize genomic variation. It achieves longest read lengths and highest consensus accuracy. Finishes microbial genomes and improves assembly of larger organisms with multi-kilobase reads and unbiased coverage regardless of GC content. No amplification is required.
Proper citation: PacBio: RS II Sequencing System (RRID:SCR_017988) Copy
https://nanoporetech.com/products/promethion
System offers real-time, long-read, direct DNA and RNA sequencing by Oxford Nanopore Technologies. System suitable for large scale projects such as population-scale sequencing or plant genomics, or for large scale service offerings. PromethION 24 and PromethION 48 systems offer ability to run 24 and 48 flow cells respectively. System allows on demand sequencing, using any flow cell at any time. Users can start and stop running individual experiments as required, or deploy multiple flow cells onto single experiments for greater speed or throughput.
Proper citation: Oxford: Nanopore Technologies: PromethION (RRID:SCR_017987) Copy
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