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https://edspace.american.edu/openbehavior/project/low-cost-eye-tracking/

Project related to eye tracking system for human research.System includes open source software for accurate eye tracking. Can identify shapes such as circles, lines, and triangles.You can rotate and mirror images and also use variety of filters.Capable of processing video in real-time for optical flow. App for viewing multiple video streams from USB cameras.

Proper citation: Low Cost Open Source Eye Tracking project (RRID:SCR_021415) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/locomouse/

Project related to study movement coordination in free walking mice. Provides noninvasive system consisting of cameras and machine learning algorithms that allow for three dimensional detection and tracking of mouse paws, tail, and nose.

Proper citation: Locomouse project (RRID:SCR_021390) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/deepposekit/

Project related to pose estimation and tracking.Includes software toolkit for 2D pose estimation of user defined keypoints using deep learning.Method for pose estimation developed by behavioral scientists at the Max Planck Institute of Animal Behavior.

Proper citation: DeepPoseKit project (RRID:SCR_021395) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/ethoscopes/

Project related to analysis of behavior in Drosophila.Provides system capable of real time video tracking. System includes raspberry pi and R package for data analysis. Enables high throughput analysis of behavior in Drosophila and other animals.

Proper citation: EthoScopes project (RRID:SCR_021426) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/picamera/

Project related to tracking animals in large spaces. Picamera system allows for tracking of animals in large behavioral arenas.Open source scalable multi camera tracking system that can be used to track behavior in combination with wireless recording systems.Design is comprised of 8 overhead Raspberry Pi cameras, capable of recording at high frame rate in large field of view, recording video independently in individual Raspberry Pi microcomputers and processed using Picamera Python library.

Proper citation: Picamera project (RRID:SCR_021423) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/live-mouse-tracker/

Project related to monitoring social interactions of mice. Provides real time behavioral analysis system for groups of mice.System includes random forest machine learning process, RFID sensors and infrared depth RGB-D camera.System includes software tool for Live Mouse Tracker analysis.

Proper citation: Live Mouse Tracker project (RRID:SCR_021421) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/d-track/

Project related to tracking animal behavior. Provided system includes two cameras and software package to track aquatic animals within captivity.Semi automatic 3D video tracking technique to analyse movements and routines of aquatic animals with application to captive dolphins.

Proper citation: D-Track project (RRID:SCR_021389) Copy   

•   Source: SciCrunch Registry

https://research.fit.edu/media/site-specific/researchfitedu/hrm/documents/Zeiss-EM900-Operating-Instructions.pdf

Research Transmission Electron Microscope with accelerating voltage of 80kV used to image low contrast biological samples.

Proper citation: Zeiss: Electron Microscope 900 (RRID:SCR_021364) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/openvape/

Project related to conducting research on effects of nicotine vapor. Provides open source chamber system for rodents to experience regulated nicotine vapor exposure from JUUL electronic cigarette.Vapor exposure apparatus comprised of Arduino Uno microcontroller that relays coded instructions to H-bridge motor controller.H-bridge then sends specific signals to motors that regulate produced vapor sent to exposure chambers.

Proper citation: OpenVape project (RRID:SCR_021485) Copy   

•   Source: SciCrunch Registry

https://drive.google.com/drive/folders/136wOxUgQKWqsesWFTmnvWh2QTJyfi-v5

Research transmission electron microscope with accelerating voltage of 80-200kV. Transmission Electron Microscope from FEI (now Thermo Fisher Scientific) is equipped with LaB6 cathode. Enables both bright field EM and scanning transmission electron microscopy (STEM) at very high resolution (at 200kV: point resolution up to 0.27 nm).

Proper citation: Tecnai G2 20 Electron Microscope (RRID:SCR_021365) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/motorized-swivel/

Project related to neural recordings such as electrophysiology, calcium imaging, and optogenetics. Provides 3D-printed, motorized commutator for neural recordings of small animals in vivo.Open source motorized swivel for in vivo neural and behavioral recordings.Device operates independently of data acquisition system, and it can be controlled through any popular platform such as Arduino or Raspberry Pi.

Proper citation: An open source motorized swivel for in vivo neural and behavioral recordings project (RRID:SCR_021482) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/syringepumpcontroller/

Project related to dispensing precise volumes of fluid over precise timescales.System components include syringe holder and control board with syringe pump controller and programming library.Syringe pump controller was developed by American University scientists.

Proper citation: Precision Syringe Pump Controller project (RRID:SCR_021493) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/pivr/

Project related to study of orientation behavior and neural circuit functions, through creation and analysis of small, freely moving animals in virtual realities. Provides virtual reality tool system for behavioral and neural circuit studies of small animals.Closed loop platform to study unrestrained sensorimotor behavior.

Proper citation: Pi Virtual Reality System project (RRID:SCR_021490) Copy   

•   Source: SciCrunch Registry

https://www.leica-microsystems.com/de/produkte/em-probenvorbereitung/p/leica-em-hpm100/

High pressure freezing device for cryofixing of biological and industrial samples. Samples that are cooled to temperature of liquid nitrogen at high pressure are vitrified and sub cellular organisation is preserved to close to native state without formation of ice crystal.

Proper citation: Leica: EM HPM100 freezer (RRID:SCR_021366) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/open-tes/

Project is related to transcranial Electrical Stimulation.Included system contains aluminum box stimulator with banana connectors for both anode and cathode on front panel,power supply on rear, power switch and serial port, LCD screen and three buttons on top panel that are used to input settings for stimulator. Device for delivering non-invasive neuromodulation techniques such as transcranial direct current stimulation. If device is used for certain types of tDCS (otDCS and tPCs) or external triggering, computer control must be used. Microcontroller is used to regulate operating speed and pulse width modulation switching frequency administrated by device.

Proper citation: Open-tES project (RRID:SCR_021487) Copy   

•   Source: SciCrunch Registry

https://www.leica-microsystems.com/products/sample-preparation-for-electron-microscopy/p/leica-em-ice/

High Pressure Freezing machine from Leica Microsystems to cryo fix biological samples for Electron Microscopy analysis.EM ICE machine allows light and electrical stimulation of samples prior to cryo fixation with millisecond time resolution.

Proper citation: Leica: EM ICE High Pressure Freezer (RRID:SCR_021367) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/openmonkeystudio/

Project for tracking interactions among freely moving monkeys.System includes integrated hardware and software for pose tracking in freely moving rhesus macaques.

Proper citation: OpenMonkeyStudio project (RRID:SCR_021409) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/rat/

Project related to rodent tracking and task control.Provides closed loop system for machine vision rodent tracking and task control created by scientist from Washington University. System to track and report mouse activity while they are contained in simple arena. System uses OpenMV M7 microcontroller to acquire images of arena and process them in real-time to report mouse centroid data to text file. Wireless position tracker for automatically tracking mice in high contrast arenas.

Proper citation: Rodent Arena Tracker project (RRID:SCR_021408) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/nerd/

Portal provides open source neural recording device for wireless transmission of local field potential data in freely behaving animals. Used for electrophysiological recording of local field potentials in freely behaving animals.

Proper citation: NeRD (RRID:SCR_021582) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/ninscope/

Portal provides miniscope for fluorescence imaging and optogenetic stimulation. Used for monitoring of neural signals during unrestrained behavior.

Proper citation: NINscope (RRID:SCR_021577) Copy   

•   Source: SciCrunch Registry