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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Harvard Partners HealthCare Center for Personalized Genetic Medicine Bioinformatics Core Facility Resource Report Resource Website |
Harvard Partners HealthCare Center for Personalized Genetic Medicine Bioinformatics Core Facility (RRID:SCR_000882) | access service resource, analysis service resource, core facility, production service resource, service resource | Core to provide gene expression data analysis service. Activities range from the provision of services to fully collaborative grant funded investigations. | affymetrix, array, PCPGM, gene, expression, data, analysis, service |
is listed by: Eagle I has parent organization: Harvard University; Cambridge; United States |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_156324 | http://www.partners.org/researchcores/trash/bioinformatics_HPCGG.html | SCR_000882 | PCPGM, bioinformatics, The Partners HealthCare Center for Personalized Genetic Medicine | 2026-09-12 12:55:15 | 0 | |||||||
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Makray Family Foundation Resource Report Resource Website |
Makray Family Foundation (RRID:SCR_000916) | funding resource | Non-profit charitable organization that benefits philanthropy, voluntarism and grantmaking foundations, focusing specifically on private independent foundations programs. (http://non-profit-organizations.findthebest.com/l/558154/Makray-Family-Foundation) | foundation, grant, philanthropy, voluntarism, grantmaking | is related to: International Genomics of Alzheimers Project | nlx_158459 | http://non-profit-organizations.findthebest.com/l/558154/Makray-Family-Foundation | SCR_000916 | 2026-09-12 12:55:16 | 0 | |||||||||
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Frontier Scientific Chemical Supplier Resource Report Resource Website 10+ mentions |
Frontier Scientific Chemical Supplier (RRID:SCR_000914) | commercial organization | A commercial vendor of chemicals that provides custom synthesis of a wide variety of organic compounds. Frontier Scientific has capabilities for custom work in organoborons, organotins, porphyrins, silanes, halogenations, catalysts and cross couplings using Suzuki, Stille, and Kumada processes. | organoborons, organotins, porphyrins, silanes, halogenations, catalysts, cross couplings, chemical, organic, compound, custom, synthesize | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_157824, grid.504592.f | https://ror.org/00d403277 | http://frontiersci.com/ | SCR_000914 | 2026-09-12 12:55:16 | 24 | ||||||||
|
University of Dundee; Scotland; United Kingdom Resource Report Resource Website 1+ mentions |
University of Dundee; Scotland; United Kingdom (RRID:SCR_000997) | university | University in Scotland, UK that provides undergraduate and doctoral degree programs. | university, undergraduate, doctoral, phd, graduate |
is related to: Kinetics for Drug Discovery is related to: Aline is parent organization of: Phospho.ELM is parent organization of: MARCAR is parent organization of: OXBench is parent organization of: GOtcha is parent organization of: Jalview is parent organization of: Kinomer is parent organization of: Human Intermediate Filament Database is parent organization of: SNAPPI is parent organization of: OME - Open Microscopy Environment is parent organization of: University of Dundee College of Life Sciences; Scotland; United Kingdom is parent organization of: University of Dundee School of Medicine; Scotland; United Kingdom is parent organization of: NoPdb: Nucleolar Proteome Database is parent organization of: Research Data Management Platform |
Crossref funder ID:100008890, ISNI:0000 0004 0397 2876, grid.8241.f, Wikidata:Q1249005, nlx_76402 | https://ror.org/03h2bxq36 | SCR_000997 | University of Dundee | 2026-09-12 12:55:17 | 2 | ||||||||
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Tufts University; Massachusetts; USA Resource Report Resource Website 1+ mentions |
Tufts University; Massachusetts; USA (RRID:SCR_000994) | university | Private research university in Medford and Somerville, Massachusetts, United States, with additional facilities in Boston and Grafton, as well as Talloires, France. Provides undergraduate, graduate, and professional degree programs. | tufts, university, undergraduate, graduate, professional |
uses: LabArchives is related to: Clinical and Translational Science Awards Consortium is related to: LabArchives is parent organization of: Tissue Engineering Resource Center is parent organization of: Tufts University School of Medicine; Massachusetts; USA is parent organization of: Tufts University Graduate School of Biomedical Sciences Graduate Programs is parent organization of: DFLAT is parent organization of: Tufts University Labs and Facilities is parent organization of: Tufts University Core Facilities is parent organization of: FluCalc is parent organization of: Tufts University Genomics Core Facility is parent organization of: Tufts University Laser Cytometry Core Facility is parent organization of: Tufts University Comparative Pathology and Genomics Shared Resource Core Facility |
Crossref funder ID:100008090, ISNI:0000 0004 1936 7531, Wikidata:Q49120, nlx_38314, grid.429997.8 | https://ror.org/05wvpxv85 | SCR_000994 | Tufts University, Tufts | 2026-09-12 12:55:17 | 9 | ||||||||
|
Phylogenetic Ontology Resource Report Resource Website |
Phylogenetic Ontology (RRID:SCR_000912) | PHYLONT | controlled vocabulary, data or information resource, ontology | Ontology for Phylogenetic Analysis | owl | is listed by: BioPortal | nlx_157550 | SCR_000912 | 2026-09-12 12:55:16 | 0 | |||||||||
|
Pasteur Institute of Lille; Lille; France Resource Report Resource Website 1+ mentions |
Pasteur Institute of Lille; Lille; France (RRID:SCR_000990) | institution | Pasteur Institute of Lille is an international research institute in Lille, France focused on bettering human health by detecting risk factors in degenerative diseases. | institute, france research, international research, lille research, human health, degenerative disease, risk factor |
is related to: AgedBrainSYSBIO is related to: International Genomics of Alzheimers Project has parent organization: Pasteur Institute is parent organization of: International Genomics of Alzheimers Project |
grid.8970.6, nlx_158125, ISNI: 0000 0001 2159 9858, Wikidata: Q3151788 | https://ror.org/05k9skc85 | SCR_000990 | Pasteur Institute of Lille, Pasteur Lille, Pasteur-Lille, Institut Pasteur de Lille | 2026-09-12 12:55:17 | 1 | ||||||||
|
Amphibian Taxonomy Ontology Resource Report Resource Website |
Amphibian Taxonomy Ontology (RRID:SCR_000906) | ATO | controlled vocabulary, data or information resource, ontology | A taxonomy of Amphibia | obo | is listed by: BioPortal | nlx_157317 | SCR_000906 | 2026-09-12 12:55:16 | 0 | |||||||||
|
Spike2 Software Resource Report Resource Website 100+ mentions |
Spike2 Software (RRID:SCR_000903) | software resource | THIS RESOURCE IS NO LONGER IN SERVICE.Documented on September 23,2022. A data acquisition and analysis software package for electrophysiology data. Spike2 software offers multi-channel continuous data acquisition and analysis with a multitude of options. This offers flexible usage from a simple chart recorder to complex applications requiring stimulus generation, data capture, scrolling or triggered displays, control of external equipment, and custom analysis. Spike2 software can be used in many fields such as electrophysiology, neurophysiology, cardiovascular and respiratory studies, sports science and pharmacology. | electrophysiology, eeg, neurophysiology, cardiovascular, respiratory, sports science, pharmacology, data acquisition, stimulus generation, data capture, continuous | works with: CED: Power1401 | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_156886, rid_000090 | SCR_000903 | Spike 2 software Cambridge Electronic Device, Spike2 | 2026-09-12 12:55:16 | 239 | ||||||||
|
Anatomic Pathology Lexicon Resource Report Resource Website |
Anatomic Pathology Lexicon (RRID:SCR_000907) | PATHLEX | controlled vocabulary, data or information resource, ontology | A comprehensive lexicon - a unified language of anatomic pathology terms - for standardized indexing and retrieval of anatomic pathology information resources. | owl | is listed by: BioPortal | nlx_157318 | SCR_000907 | 2026-09-12 12:55:16 | 0 | |||||||||
|
HIV ontology Resource Report Resource Website |
HIV ontology (RRID:SCR_000908) | HIV | controlled vocabulary, data or information resource, ontology | Ontology that encompasses all knowledge about HIV | obo | is listed by: BioPortal | HIV | nlx_157422 | SCR_000908 | 2026-09-12 12:55:16 | 0 | ||||||||
|
NIH Office of Research on Women's Health; Bethesda; Maryland Resource Report Resource Website 1+ mentions |
NIH Office of Research on Women's Health; Bethesda; Maryland (RRID:SCR_000986) | ORWH, NIH ORWH | funding resource | The Office of Research on Women's Health (ORWH) is part of the Office of the Director of NIH. ORWH works in partnership with the 27 NIH Institutes and Centers to ensure that women’s health research is part of the scientific framework at the NIH and throughout the scientific community. | funding resource, office of research, women, health, nih women, orwh, women health research |
has parent organization: NIH Office of the Director has plug in: National Finals Rodeo 2018 live stream |
nlx_152796 | http://orwh.od.nih.gov/research/fundingopportunities.asp | SCR_000986 | NIH Office of Research on Womens Health, NIH Office of Research on Women's Health | 2026-09-12 12:55:17 | 4 | |||||||
|
C-PAC Resource Report Resource Website 1+ mentions |
C-PAC (RRID:SCR_000862) | C-PAC | data processing software, image analysis data, software application, software resource, workflow software | A configurable, open-source, Nipype-based, automated processing pipeline for resting state functional MRI (R-fMRI) data, for use by both novice and expert users. C-PAC was designed to bring the power, flexibility and elegance of the Nipype platform to users in a plug and play fashion?without requiring the ability to program. Using an easy to read, text-editable configuration file, C-PAC can rapidly orchestrate automated R-fMRI processing procedures, including: - quality assurance measurements - image preprocessing based upon user specified preferences - generation of functional connectivity maps (e.g., correlation analyses) - customizable extraction of time-series data - generation of local R-fMRI metrics (e.g., regional homogeneity, voxel-matched homotopic connectivity, fALFF/ALFF) C-PAC makes it possible to use a single configuration file to launch a factorial number of pipelines differing with respect to specific processing steps. | computational neuroscience, connectivity analysis, macos, magnetic resonance, nifti, nipype, posix/unix-like, python, workflow, resting state functional mri, fmri |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: 1000 Functional Connectomes Project |
Open source | nlx_155720 | http://www.nitrc.org/projects/cpac | SCR_000862 | Configurable Pipeline for the Analysis of Connectomes | 2026-09-12 12:55:15 | 8 | ||||||
|
National Taiwan University; Taipei; Taiwan Resource Report Resource Website 1+ mentions |
National Taiwan University; Taipei; Taiwan (RRID:SCR_000983) | NTU | university | A national research university in Taipei, Taiwan. The university confers degrees at the undergraduate and graduate level bio-resources and agriculture, electrical engineering and computer science, engineering, law, liberal arts, management, medicine, public health, and the social sciences. | national, research, law, finance, engineering, electrical, medicine, undergraduate, graduate |
is parent organization of: Library for Support Vector Machines is parent organization of: VNTR Locus Database is parent organization of: LIBSVM is parent organization of: TCMGeneDIT is parent organization of: Functional MRI Analysis and Clustering Tools is parent organization of: Oncogenomic Database of Hepatocellular Carcinoma is parent organization of: POINT: Prediction Of INTeractome |
Wikidata:Q32746, nlx_65230, ISNI:0000 0004 0546 0241, grid.19188.39, Crossref funder ID:501100006477 | https://ror.org/05bqach95 | SCR_000983 | 2026-09-12 12:55:17 | 1 | ||||||||
|
National University of Singapore; Singapore; Singapore Resource Report Resource Website 1+ mentions |
National University of Singapore; Singapore; Singapore (RRID:SCR_000984) | NUS | university | A public university located in Singapore that has a wide range of faculties and schools, including arts, business, computing, and dentistry. | public, singapore, art, business, computing, dentistry, design, architecture |
is parent organization of: imcalc: SPM batch image calculator is parent organization of: pfSNP is parent organization of: vis: SPM Visualized Statistics toolbox is parent organization of: AllerHunter: Cross-reactive Allergen Prediction Home is parent organization of: GBSA is parent organization of: Yong Loo Lin School of Medicine; Singapore; Singapore is parent organization of: Christopher Hogues Research Lab at the National University of Singapore is parent organization of: MBInfo is parent organization of: Therapeutic Target Database is parent organization of: DART - Drug Adverse Reaction Targets is parent organization of: Kinetic Data of Bio-molecular Interaction is parent organization of: MHC-Peptide Interaction Database is parent organization of: Xpro is parent organization of: Computed Ligand Binding Energy is parent organization of: Drosophila melanogaster Exon Database is parent organization of: Drug ADME Associated Protein Database is parent organization of: Trauma Screening Questionaire is parent organization of: Mixed Effect Model of Genetic-Set and Environment Interaction |
nlx_67014 | SCR_000984 | National University of Singapore | 2026-09-12 12:55:17 | 2 | ||||||||
|
BWH Surgical Planning Laboratory Resource Report Resource Website |
BWH Surgical Planning Laboratory (RRID:SCR_000869) | BWH SPL | group | A laboratory dedicated to advancing health care through utilizing computation and imaging to new areas of medicine. | computation, imaging, medicine, research, publication | is listed by: Eagle I | nlx_156146 | http://harvard.eagle-i.net/i/0000012c-745f-93d3-c437-ff0b80000000 | SCR_000869 | 2026-09-12 12:55:15 | 0 | ||||||||
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NeuroVigil Resource Report Resource Website |
NeuroVigil (RRID:SCR_000866) | commercial organization | Commercial company that produces simple EEG measurement devices compatible with phones.Develops proprietary non invasive brain monitors and advanced machine learning algorithms to detect constellation of biomarkers of pathologies in asymptomatic individuals, such as people with neurodegeneration, adverse drug side effects or brain cancer, and to ascertain intent including individuals who cannot otherwise communicate. | brainwaves, brain waves, eeg | nlx_15581 | SCR_000866 | NeuroVigil: Revolutionizing Brain Analysis | 2026-09-12 12:55:15 | 0 | ||||||||||
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Medscape Education - Medscape CME/CE Resource Report Resource Website |
Medscape Education - Medscape CME/CE (RRID:SCR_000936) | continuing medical education, data or information resource, portal, topical portal, training resource | A portal with listings of continuing medical education opportunities such as radiology, pediatrics, and HIV/AIDS specializations. | education, medical, continuing, portal, information | Public | nlx_91735 | SCR_000936 | MedscapeCME, Medscape Education Medscape CME/CE, Medscape CME/CE | 2026-09-12 12:55:16 | 0 | |||||||||
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Google Project Hosting Resource Report Resource Website 1+ mentions |
Google Project Hosting (RRID:SCR_000811) | Google Project Hosting | data or information resource, organization portal, portal, software application, software development environment, software development tool, software repository, software resource, source code | Project Hosting on Google Code provides a free collaborative development environment for open source projects. | project |
has parent organization: Google Code is parent organization of: Biopieces is parent organization of: PIDO - Primary Immunodeficiency Disease Ontology is parent organization of: OWLTools is parent organization of: Neuroglancer |
Open unspecified license | nlx_149266 | SCR_000811 | Project Hosting on Google Code | 2026-09-12 12:55:15 | 1 | |||||||
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American Federation for Aging Research Resource Report Resource Website 1+ mentions |
American Federation for Aging Research (RRID:SCR_000806) | AFAR | non profit organization | A non-profit organization that supports the advance of healthy aging through biomedical research. | funding resource, healthy aging, late adult human, biotechnology | Aging | Crossref funder ID: 100005366, Wikidata: Q4743745, nlx_144115, grid.427612.4, ISNI: 0000 0001 0395 8845 | https://ror.org/000r61a05 | SCR_000806 | 2026-09-12 12:55:15 | 5 |
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