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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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QuestionPro Resource Report Resource Website 10+ mentions |
QuestionPro (RRID:SCR_023309) | software resource | Survey software to design and host questionaires. Used as survey creator. Enables to choose from survey question types ranging from net promoter score questions for efficient customer satisfaction surveys to advanced multiple-choice and logic-based research questions. | QuestionPro, Inc., design and host questionaires, survey creator, | Restricted | SCR_023309 | 2026-08-29 11:28:26 | 32 | |||||||||||
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Google Looker Studio Resource Report Resource Website 1+ mentions |
Google Looker Studio (RRID:SCR_023549) | data access protocol, software resource, web service | Former name Google Data Studio, is online tool for converting data into customizable informative reports and dashboards introduced by Google on March 15, 2016 as part of enterprise Google Analytics 360 suite. Online service for graphic data visualization. | Google Analytics 360 suite, graphic data visualization, converting data, reports and dashboards, data visualization | Free, Freely available | SCR_023549 | Google Data Studio, , Looker Studio | 2026-08-29 11:28:20 | 2 | ||||||||||
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PhysiCOOL Resource Report Resource Website 1+ mentions |
PhysiCOOL (RRID:SCR_023305) | PhysiCOOL | software library, software resource, software toolkit | Software Python library tailored to perform model calibration studies with PhysiCell. Generalized framework for model Calibration and Optimization Of modeLing projects. | perform model calibration studies, PhysiCell, Calibration and Optimization, modeling projects, | Free, Available for download, Freely available | SCR_023305 | Physi Calibration and Optimization Of modeLing | 2026-08-29 11:28:18 | 1 | |||||||||
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NanoString GeoMx Tools Resource Report Resource Website 10+ mentions |
NanoString GeoMx Tools (RRID:SCR_023424) | data analysis software, data processing software, software application, software resource | Software package contains tools for analyzing data from NanoString GeoMx Digital Spatial Profiler. Provides functions to read, quality control and normalize starting from Nanostring DCC and PKC files generated from NanoString GeoMx DSP. Contains definition of NanoStringGeoMxSet class which inherits from Biobase’s ExpressionSet class and NanoStringRCCSet class. | NanoString GeoMx Digital Spatial Profiler, Nanostring DCC, PKC files, NanoString GeoMx DSP, Biobase ExpressionSet class, NanoStringRCCSet class, | Free, Available for download, Freely available | https://bioconductor.org/packages/GeomxTools/ | SCR_023424 | GeoMxTools | 2026-08-29 11:28:27 | 41 | |||||||||
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DeepCT Resource Report Resource Website 1+ mentions |
DeepCT (RRID:SCR_023302) | data analysis software, data processing software, software application, software resource | Software tool can learn complex interconnections of epigenetic features and infer unmeasured data from any available input. Can learn cell type-specific properties, build biologically meaningful vector representations of cell types, and utilize these representations to generate cell type-specific predictions of effects of non-coding variations in human genome. | interconnections of epigenetic features, infer unmeasured data, human genome | DOI:10.1101/2021.12.31.474623 | Free, Available for download, Freely available | SCR_023302 | 2026-08-29 11:27:57 | 1 | ||||||||||
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EraSOR Resource Report Resource Website |
EraSOR (RRID:SCR_023544) | data analysis software, data processing software, software application, software resource | Software Python tool for removing bias introduced from having overlapped samples between base GWAS data and target genotype data for Polygenic Risk Score analyses. Used for adjusting inflation in PRS prediction and association statistics in presence of sample overlap or close relatedness between GWAS and target samples. | removing bias, overlapped samples, GWAS data, target genotype data, Polygenic Risk Score, PRS prediction and association statistics, | DOI:10.1101/2021.12.10.472164 | Free, Available for download, Freely available | SCR_023544 | Erase Sample Overlap and Relatedness | 2026-08-29 11:28:28 | 0 | |||||||||
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Creative Biolabs Non-IgG Antibody Isotypes Services Resource Report Resource Website |
Creative Biolabs Non-IgG Antibody Isotypes Services (RRID:SCR_023640) | service resource | Provides high quality custom non-IgG antibody services. | USEDit, ABRF, custom non-IgG antibody services, |
is listed by: ABRF CoreMarketplace is related to: Creative Biolabs Core Facility is related to: USEDit has parent organization: Creative Biolabs |
ABRF_1776 | https://coremarketplace.org/?FacilityID=1776&citation=1 | SCR_023640 | Non-IgG Antibody Isotypes, CBL (Germany) Non-IgG Antibody Isotypes | 2026-08-29 11:28:21 | 0 | ||||||||
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Hamamatsu: NanoZoomer S360 Digital slide scanner Resource Report Resource Website 1+ mentions |
Hamamatsu: NanoZoomer S360 Digital slide scanner (RRID:SCR_023761) | instrument resource | NanoZoomer series is family of whole slide scanners that rapidly scan glass slides to convert them to digital data. NanoZoomer S360 is ideal for use in hospitals and clinical laboratories. | USEDit, Hamamatsu, whole slide scanner, | is listed by: USEDit | Restricted | SCR_023761 | NanoZoomer S360 Digital slide scanner | 2026-08-29 11:28:30 | 4 | |||||||||
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Hamamatsu: NanoZoomer S210 Digital slide scanner Resource Report Resource Website 1+ mentions |
Hamamatsu: NanoZoomer S210 Digital slide scanner (RRID:SCR_023760) | instrument resource | NanoZoomer series is family of whole slide scanners that rapidly scan glass slides to convert them to digital data. NanoZoomer S210 provides high performance capable of handling large number of slides. | USEDit, Hamamotsu, whole slide scanner, glass slides, large number of slides | is listed by: USEDit | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_023760.pdf | SCR_023760 | NanoZoomer S210 Digital slide scanner | 2026-08-29 11:28:23 | 3 | ||||||||
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Hamamatsu: FDSS-GX Kinetic Plate Imager Resource Report Resource Website |
Hamamatsu: FDSS-GX Kinetic Plate Imager (RRID:SCR_023759) | instrument resource | Kinetic plate imager optimized for 96-, 384-, and 1536-well for high throughput screening, enabling whole microplate imaging and simultaneous injections to all wells. System achieves high sensitivity imaging with qCMOS sensor, and highly accurate and repeatable micro-dispensing by adopting 1536 ch dispensing unit capable of dispensing variable volumes. By combining optional parts, robot free semi automation system can be built according to user's purpose. | USEDit, Hamamatsu Photonics K.K., kinetic plate imager, high throughput screening, whole microplate imaging, wells simultaneous injections, | Restricted | SCR_023759 | FDSS-GX Kinetic Plate Imager | 2026-08-29 11:28:30 | 0 | ||||||||||
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Apache Zeppelin Resource Report Resource Website 1+ mentions |
Apache Zeppelin (RRID:SCR_023637) | software resource, web application | Web based notebook that enables data driven, interactive data analytics and collaborative documents with SQL, Scala, Python, R and more. Multi purposed web based notebook which brings data ingestion, data exploration, visualization, sharing and collaboration. | notebook, data ingestion, data exploration, data visualization, interactive data analytics, collaborative documents, SQL, Scala, Python, R | Free, Available for download, Freely available | https://github.com/apache/zeppelin | SCR_023637 | 2026-08-29 11:28:01 | 1 | ||||||||||
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SwissTargetPrediction Resource Report Resource Website 1000+ mentions |
SwissTargetPrediction (RRID:SCR_023756) | data access protocol, software resource, web service | Web tool to estimate the most probable macromolecular targets of small molecule, assumed as bioactive. Prediction is founded on combination of 2D and 3D similarity with library of known actives on proteins from three different species. | protein targets, small molecule, bioactive small molecule, macromolecular target estimation, target prediction, | Swiss Institute of Bioinformatics | PMID:31106366 | Free, Freely available | SCR_023756 | 2026-08-29 11:28:23 | 2774 | |||||||||
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Sciex Resource Report Resource Website 100+ mentions |
Sciex (RRID:SCR_023651) | commercial organization | Manufacturer of mass spectrometry instrumentation used in biomedical and environmental applications. Originally started by scientists from the University of Toronto Institute for Aerospace Studies, it is now part of Danaher Corporation with the SCIEX R&D division still located in Toronto, Canada. | Manufacturer, mass spectrometry instrumentation, Danaher Corporation, | SCR_023651 | 2026-08-29 11:28:21 | 187 | ||||||||||||
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Natural Scenes Dataset Resource Report Resource Website 10+ mentions |
Natural Scenes Dataset (RRID:SCR_023648) | NSD | data or information resource, data set, portal, topical portal | Portal for large scale fMRI dataset conducted at ultra high field strength at Center of Magnetic Resonance Research at University of Minnesota. Dataset consists of whole brain, high resolution fMRI measurements of healthy adult subjects while they viewed thousands of color natural scenes over course of scan sessions. While viewing these images, subjects were engaged in continuous recognition task in which they reported whether they had seen each given image at any point in experiment. These data constitute massive benchmark dataset for computational models of visual representation and cognition, and can support wide range of scientific inquiry. | Natural scenes, vision, fMRI measurements, fMRI dataset, whole brain, healthy adult subjects, images, visual representation and cognition, benchmark, training data | has parent organization: University of Minnesota Twin Cities; Minnesota; USA | PMID:34916659 | Free,Freely available | https://github.com/cvnlab/nsdcode/ | SCR_023648 | 2026-08-29 11:28:21 | 44 | |||||||
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SlideBook Resource Report Resource Website 500+ mentions |
SlideBook (RRID:SCR_014423) | data analysis software, data processing software, software application, software resource | Digital microscopy software for research microscopy. It comes standard with drivers to control numerous instruments in and around the microscope. When online, data is acquired in a native-3D format over time, color and specimen locations in customizable experiment protocols. Data can be analyzed by a wide variety of tools for image processing including mathematical operations, statistics functions, analysis scripting and import to/export from MATLAB. Additional modules are available for special applications ranging from deconvolution to photomanipulation to multiphoton. | SCR_014423 | 2026-08-29 11:28:29 | 986 | |||||||||||||
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BD Biosciences: FACSymphony A3 Cell Analyzer Resource Report Resource Website 1+ mentions |
BD Biosciences: FACSymphony A3 Cell Analyzer (RRID:SCR_023644) | instrument resource | Fluorescence activated cell analyzing instrument by BD Biosciences. Allows for the simultaneous detection of up to 30 parameters and 28 colors. | Flow cytometer, cell analyzer, simultaneous detection, instrument, equipment, USEDit | is listed by: USEDit | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_023644.pdf | Model_Number_FACSymphony_A3 | SCR_023644 | BD FACSymphony A3 | 2026-08-29 11:28:29 | 9 | ||||||||
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LI-COR: Odyssey Classic Imager Resource Report Resource Website 10+ mentions |
LI-COR: Odyssey Classic Imager (RRID:SCR_023765) | instrument resource | Odyssey Classic Imaging System provides flexible, multifunctional platform to accommodate variety of applications. Western blot imager, plate reader, slide scanner, luminescence imager. Performs membrane-, plate-, gel-, and slide based assays. | USEDit, Li-Cor Inc., Western blot imager, plate reader, slide scanner, luminescence imager, | is listed by: USEDit | Restricted | SCR_023765 | , Odyssey Classic, Odyssey Classic Imaging System | 2026-08-29 11:28:23 | 13 | |||||||||
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partec flomax Resource Report Resource Website 1+ mentions |
partec flomax (RRID:SCR_014026) | data or information resource, portal, topical portal | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on June 1,2023. Partec uses FloMax software on most cytometers, which produces FCS 3.0 compliant files. FloMax rescales the fluorescent data on the acquisition display without changing the stored values. | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_014026 | 2026-08-29 11:28:29 | 7 | ||||||||||||
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Hamamatsu: NanoZoomer S20 Digital slide scanner Resource Report Resource Website |
Hamamatsu: NanoZoomer S20 Digital slide scanner (RRID:SCR_023764) | instrument resource | NanoZoomer series is family of whole slide scanners that rapidly scan glass slides to convert them to digital data. NanoZoomer S20 is compact, high speed, and adaptable scanner. | USEDit, Hamamatsu, whole slide scanner, compact scanner, high speed scanner, adaptable scanner, | is listed by: USEDit | Restrited | SCR_023764 | NanoZoomer S20 Digital slide scanner | 2026-08-29 11:28:30 | 0 | |||||||||
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GE: Healthcare: IN Cell Analyzer 2200 Resource Report Resource Website 1+ mentions |
GE: Healthcare: IN Cell Analyzer 2200 (RRID:SCR_023616) | instrument resource | Cell imaging system for fast, automated imaging in fixed and live cells. Instrument can rapidly image cells using laser autofocusing, LED light source and CMOS camera. | Biosample imaging, cell imaging system, automated imaging, fixed and live cells, instrument, equipment, USEDit | is listed by: USEDit | Commercially available | SCR_023616 | IN Cell Analyzer 2200, GE IN Cell Analyzer 2200 | 2026-08-29 11:28:21 | 1 |
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