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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Corn Fungal Resistance Associated Sequences Database Resource Report Resource Website |
Corn Fungal Resistance Associated Sequences Database (RRID:SCR_010644) | CFRAS-DB | data or information resource, database | A relational database with dynamic querying and data integration that can be used by researchers to identify genetic sequences with a high probability of being associated with aflatoxin accumulation resistance, according to multiple lines of evidence. CFRAS-DB integrates genomic, proteomic, and genetic data from multiple studies in maize dealing with aflatoxin accumulation or Aspergillus flavus resistance., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | has parent organization: Mississippi State University; Mississippi; USA | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_65361 | SCR_010644 | SciCrunch Registry | 2026-10-17 01:33:30 | 0 | |||||||||
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CGHweb Resource Report Resource Website 10+ mentions |
CGHweb (RRID:SCR_010923) | CGHweb | analysis service resource, data analysis service, production service resource, service resource | Data analysis service enabling users to analyse their array-CGH data with multiple algorithms simultaneously. |
is listed by: OMICtools has parent organization: Harvard Medical School; Massachusetts; USA |
OMICS_00713 | SCR_010923 | SciCrunch Registry | 2026-10-17 01:33:31 | 12 | ||||||||||
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Align-GVGD Resource Report Resource Website 50+ mentions |
Align-GVGD (RRID:SCR_010772) | Align-GVGD | analysis service resource, data analysis service, production service resource, service resource | A freely available, web-based program that combines the biophysical characteristics of amino acids and protein multiple sequence alignments to predict where missense substitutions in genes of interest fall in a spectrum from enriched delterious to enriched neutral. | is listed by: OMICtools | Free | OMICS_00125 | SCR_010772 | SciCrunch Registry | 2026-10-17 01:34:12 | 93 | |||||||||
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PlanTAPDB Resource Report Resource Website |
PlanTAPDB (RRID:SCR_010897) | PlanTAPDB | data or information resource, database | A phylogeny-based comprehensive database of plant transcription associated proteins. | is listed by: OMICtools | PMID:17337525 | Free | OMICS_00558 | SCR_010897 | SciCrunch Registry | 2026-10-17 01:33:31 | 0 | ||||||||
|
MutationTaster Resource Report Resource Website 1000+ mentions |
MutationTaster (RRID:SCR_010777) | MutationTaster | analysis service resource, data analysis service, production service resource, service resource | Evaluates disease-causing potential of sequence alterations. | bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools is listed by: SoftCite |
PMID:20676075 | Acknowledgement requested | biotools:mutation_taster, OMICS_00153 | https://bio.tools/mutation_taster | SCR_010777 | SciCrunch Registry | 2026-10-17 01:34:12 | 4781 | ||||||
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Mouse ES Stem Cell Bank Resource Report Resource Website 1+ mentions |
Mouse ES Stem Cell Bank (RRID:SCR_010660) | biomaterial supply resource, material resource, tissue bank | Not yet vetted by NIF curator | nlx_69742 | SCR_010660 | SciCrunch Registry | 2026-10-17 01:33:30 | 2 | ||||||||||||
|
Genomic HyperBrowser Resource Report Resource Website 10+ mentions |
Genomic HyperBrowser (RRID:SCR_010909) | Genomic HyperBrowser | analysis service resource, data analysis service, production service resource, service resource | A generic web-based system, providing statistical methodology and computing power to handle a variety of biological inquires on genomic datasets. | genomic, genomic track, gene regulation, disease association, epigenetic modification, genome |
is listed by: OMICtools has parent organization: University of Oslo; Oslo; Norway |
PMID:23632163 PMID:21182759 |
OMICS_00638 | SCR_010909 | SciCrunch Registry | The Genomic HyperBrowser | 2026-10-17 01:34:12 | 20 | |||||||
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Vaccine damage reports database Resource Report Resource Website |
Vaccine damage reports database (RRID:SCR_010740) | Vaccine damage reports database | data or information resource, database | Database of case reports of adverse reactions to vaccinations. There are 806 reports (May 2013). If you would like to report a case, please go to report your own vaccine reaction. The user may search by keywords or sort by vaccine, country, age, outcome, gender and hospital admission. | vaccine, adverse reaction, clinical, male, female, child, adult | Adverse reaction to vaccine, Aging | The community can contribute to this resource | nlx_97470 | SCR_010740 | SciCrunch Registry | Vaccine damages database, Adverse reaction/vaccine damage database | 2026-10-17 01:35:00 | 0 | |||||||
|
UCSC Cancer Genomics Browser Resource Report Resource Website 500+ mentions |
UCSC Cancer Genomics Browser (RRID:SCR_011796) | Cancer Genomics Browser | data or information resource, database, service resource | A suite of web-based tools to visualize, integrate and analyze cancer genomics and its associated clinical data. It is possible to display your own clinical data within one of their datasets. | genome, genomics, clinical, next-generation sequencing, chromosome, gene, FASEB list |
is listed by: OMICtools has parent organization: University of California at Santa Cruz; California; USA |
Cancer | NCI ; NHGRI ; American Association for Cancer Research ; UCSF Comprehensive Cancer Center ; California Institute for Quantitative Biosciences |
PMID:23109555 PMID:21059681 PMID:19333237 |
Acknowledgement requested | OMICS_00925 | SCR_011796 | SciCrunch Registry | 2026-10-17 01:33:32 | 589 | |||||
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Molecular Modeling DataBase Resource Report Resource Website 10+ mentions |
Molecular Modeling DataBase (RRID:SCR_010623) | MMDB | data or information resource, database | The Molecular Modeling DataBase (MMDB), also known as Entrez Structure, is a database of experimentally determined structures obtained from the RCSB Protein Data Bank (PDB). MMDB is developed by the Structure Group of the NCBI Computational Biology Branch. The data processing procedure at NCBI results in the addition of a number of useful features that facilitate computation on the data and link them to many other data types in the Entrez system. The structure database is considerably smaller than Entrez''s Protein or Nucleotide databases, but a large fraction of all known protein sequences have homologs in this set, and one may often learn more about a protein by examining 3-D structures of its homologs. These are accessible as Related Structures in the Links menu of Entrez Protein sequence records (illustrated example). It is then possible to align the query protein to the structure-based sequence, as shown in the illustration on this page. Additional resources can be used along with MMDB to interactively view the structures, find similar 3D structures, learn about the types of interactions and bound chemicals that have been found to exist among the similar 3D structures, and more. | macromolecule, structure, 3d spatial image, protein structure, gold standard |
is related to: NCBI Structure has parent organization: NCBI |
PMID:17135201 | nlx_56387 | http://www.ncbi.nlm.nih.gov/sites/entrez?db=structure, http://www.ncbi.nlm.nih.gov/structure | SCR_010623 | SciCrunch Registry | Entrez Structure, NCBI Structure, Structure database, Structure (Molecular Modeling Database) | 2026-10-17 01:34:09 | 16 | ||||||
|
Dhruv Dental Stem Cell Bank Resource Report Resource Website |
Dhruv Dental Stem Cell Bank (RRID:SCR_010744) | biomaterial supply resource, material resource, tissue bank | Not yet vetted by NIF curator | nlx_98186 | SCR_010744 | SciCrunch Registry | 2026-10-17 01:33:31 | 0 | ||||||||||||
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Mayo Validation Support Services Biobank Resource Report Resource Website |
Mayo Validation Support Services Biobank (RRID:SCR_010745) | Mayo Validation Support Services Biospecimens | biomaterial supply resource, material resource, tissue bank | A core laboratory facility provides high-volume, high-quality tissue and biospecimen preparation and processing in support of Mayo research. Mayo Validation Support Services utilizes these resources to deliver extensive validation capabilities specific to individualized Sponsor requirements. Medical scientific expertise at Mayo Clinic allows for unique collaborations combining quality biospecimens linked to comprehensive clinical outcomes. Biospecimens can be accessed via archives or prospectively collected via individualized standard operating procedures. Patient information for all biospecimens is protected through oversight by an Institutional Review Board (IRB). Specimens may be collected and/or processed in a variety of customized formats for individual collaborations. Typical formats include: * Specimen Processing: Tissue RNA/DNA extraction capabilities, Paraffin and frozen sectioning, Immunostaining, Digital imaging, Laser capture microdissection, Tissue microarray construction, Preparation of protocol-collected tissue (FFPE, OCT, Snap-frozen, PBS) * Blood: Circulating tumor cells, Serum, Plasma, PBMC, Whole blood for FACS analysis, Blood smears * Other: Induced sputum, Saliva, Buccal swabs, Lip biopsies, Colonoscopy biopsies, Synovium, Stool, Urine Biospecimens located within archives are well-characterized and associated with phenotypic information. Multiple types and formats of biospecimens are available for customized validation purposes. | blood, tumor cells, serum, plasma, pbmc, whole blood, blood smears, sputum, saliva, buccal swabs, lip biopsies, colonoscopy biopsies, synovium, stool, urine rna, dna, paraffin, frozen, immunostaining, digital imaging, laser capture microdissection, tissue microarray, ffpe, oct, snap-frozen, pbs, private, (in support of mayo research) |
is listed by: One Mind Biospecimen Bank Listing has parent organization: Mayo Clinic Minnesota; Minnesota; USA |
Private: in support of Mayo research | nlx_98533 | SCR_010745 | SciCrunch Registry | Mayo Validation Support Services Quality Biospecimens | 2026-10-17 01:34:12 | 0 | |||||||
|
Genetic Alliance Biobank Resource Report Resource Website 1+ mentions |
Genetic Alliance Biobank (RRID:SCR_010625) | Genetic Alliance Registry and BioBank | biomaterial supply resource, material resource, tissue bank | Genetic Alliance Registry and BioBank is a centralized, clinical data registry and sample repository (including DNA, serum, cells and tissues) that enables translational research. It is a nonprofit organization established by seven patient advocacy organizations. These organizations share resources for their BioBanks, such as the contract to the independent lab that processes the samples, but each organization will maintain ownership, control and costs associated with their sample collection. Founded in 2003, this cooperative venture provides shared infrastructure and customized solutions for disease advocacy organizations to lead sophisticated research initiatives. Genetic Alliance Registry and BioBank is an advocacy owned repository for biological samples and clinical data. It provides: * Centralized, standardized collection and archiving * Highest biorepository and participant protection standards * Open access for all organization approved researchers * Advocacy organization control | genetics |
is listed by: One Mind Biospecimen Bank Listing is related to: CFC International is related to: PXE International Registry and BioBank is parent organization of: National Psoriasis BioBank |
nlx_56978 | SCR_010625 | SciCrunch Registry | Genetic Alliance Registry & BioBank | 2026-10-17 01:33:30 | 2 | ||||||||
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Multiple Sclerosis Research Australia Brain Bank Resource Report Resource Website |
Multiple Sclerosis Research Australia Brain Bank (RRID:SCR_010747) | MS Research Australia Brain Bank | biomaterial supply resource, material resource, tissue bank | Biomaterial supply resource which provides high quality and well-chracaterized brain tissue samples for MS research. Registered MS brain donors and their families are kept up to date on the latest progress in MS research. | biomaterial supply resource, brain, brain tissue, brain bank, MS, multiple sclerosis | is listed by: Multiple Sclerosis Discovery Forum | Multiple Sclerosis | Collier Charitable Fund ; MS Research Australia ; NSW Government Office for Science and Medical Research ; Trish MS Research Foundation ; University of Sydney |
Free, Freely available | SCR_013840, nlx_99028 | SCR_010747 | SciCrunch Registry | 2026-10-17 01:35:00 | 0 | ||||||
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Clinical Psychology and Psychiatry: A Closer Look Resource Report Resource Website |
Clinical Psychology and Psychiatry: A Closer Look (RRID:SCR_010591) | blog, data or information resource, narrative resource | Clinical Psychology and Psychiatry: A Closer Look Psychiatric medications, science, marketing, psychiatry in general, and occasionally clinical psychology. Questioning the role of key opinion leaders and the use of science to promote commercial ends rather than the needs of people with mental health concerns. | nlx_48889 | SCR_010591 | SciCrunch Registry | Clinical Psychology and Psychiatry: A Closer Look | 2026-10-17 01:34:09 | 0 | |||||||||||
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Marbank - National Marine BioBank Resource Report Resource Website |
Marbank - National Marine BioBank (RRID:SCR_010592) | biomaterial supply resource, material resource, tissue bank | Not yet vetted by NIF curator | nlx_49050 | SCR_010592 | SciCrunch Registry | 2026-10-17 01:33:30 | 0 | ||||||||||||
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GeneDB Spombe Resource Report Resource Website |
GeneDB Spombe (RRID:SCR_010639) | GeneDB_Spombe, GeneDB Spombe, GeneDB S. pombe | data or information resource, database | THIS RESOURCE IS NO LONGER IN SERVICE documented June 6, 2013 Database of all S. pombe (fission yeast) known and predicted protein coding genes, pseudogenes, transposons, tRNAs, rRNAs, snRNAs, snoRNAs and other known and predicted non-coding RNAs. Curation of new and existing literature is ongoing and changes are incorporated weekly. User feedback is welcome. The genome of fission yeast (Schizosaccharomyces pombe), which contains the smallest number of protein-coding genes yet recorded for a eukaryote: 4,824, has been sequenced and annotated. The centromeres are between 35 and 110 kilobases (kb) and contain related repeats including a highly conserved 1.8-kb element. Regions upstream of genes are longer than in budding yeast (Saccharomyces cerevisiae), possibly reflecting more-extended control regions. Some 43% of the genes contain introns, of which there are 4,730. Fifty genes have significant similarity with human disease genes; half of these are cancer related. We identify highly conserved genes important for eukaryotic cell organization including those required for the cytoskeleton, compartmentation, cell-cycle control, proteolysis, protein phosphorylation and RNA splicing. These genes may have originated with the appearance of eukaryotic life. Few similarly conserved genes that are important for multicellular organization were identified, suggesting that the transition from prokaryotes to eukaryotes required more new genes than did the transition from unicellular to multicellular organization. | fission yeast |
is related to: PomBase has parent organization: GeneDB |
Wellcome Trust | PMID:11859360 | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_62442 | SCR_010639 | SciCrunch Registry | Schizosaccharomyces pombe GeneDB, GDB S. pombe | 2026-10-17 01:34:57 | 0 | |||||
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University of Florida Molecular Tissue Bank Resource Report Resource Website |
University of Florida Molecular Tissue Bank (RRID:SCR_010599) | biomaterial supply resource, material resource, tissue bank | Tissue bank that handles human tissue. | nlx_49428 | http://www.pathology.ufl.edu/%7EMolecular/M_newindex.html | SCR_010599 | SciCrunch Registry | 2026-10-17 01:33:30 | 0 | |||||||||||
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MUW Biobank Resource Report Resource Website |
MUW Biobank (RRID:SCR_010632) | biomaterial supply resource, material resource, tissue bank | Not yet vetted by NIF curator | nlx_60522 | SCR_010632 | SciCrunch Registry | 2026-10-17 01:34:10 | 0 | ||||||||||||
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Tata Memorial Hospital Tissue Bank Resource Report Resource Website |
Tata Memorial Hospital Tissue Bank (RRID:SCR_010633) | biomaterial supply resource, material resource, tissue bank | Not yet vetted by NIF curator | nlx_66170 | https://tmc.gov.in/actrec/index.php/ | SCR_010633 | SciCrunch Registry | 2026-10-17 01:33:30 | 0 |
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