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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Authority Synonyms Record Last Update Mentions Count
neurotic
 
Resource Report
Resource Website
neurotic (RRID:SCR_021406) data analysis software, data processing software, software application, software resource, software toolkit Software Python toolbox for interactive characterization in neuroscience.Users can read in variety of file formats for neural data and video, which they can then process, filter, analyze, annotate and plot.Used to review and annotate signal data synchronized with video, performs simple initial analyses including signal filtering and spike detection, supports variety of file formats.Facilitates collaborations by using portable specification for loading and processing data and retrieving data files from online sources.App for Windows, macOS, and Linux to review and annotate electrophysiology data and simultaneously captured video. Anotate electrophysiology data, interactive characterization, neural data and video, signal data, signal filtering, spike detection, OpenBehavior is listed by: OpenBehavior
is related to: neurotic project
DOI:10.1523/eneuro.0085-20.2020 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/neurotic/ SCR_021406 SciCrunch Registry NEUROscience Tool for Interactive Characterization 2026-10-10 12:41:22 0
Optimouse
 
Resource Report
Resource Website
1+ mentions
Optimouse (RRID:SCR_021527) data analysis software, data processing software, software application, software resource Software tool for analysis of mouse position data.Open source software to analyze positions of individual mice, specifically their nose positions, in behavioral arena with the goal of minimizing error. Mouse position data analysis, mouse position, position data, nose position, OpenBehavior is listed by: OpenBehavior
is related to: Optimouse project
DOI:10.1186/s12915-017-0377-3 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/optimouse/ SCR_021527 SciCrunch Registry 2026-10-10 12:41:29 2
DIY-NAMIC project
 
Resource Report
Resource Website
DIY-NAMIC project (RRID:SCR_021489) data or information resource, instrument resource, portal, project portal Project is related to measurement of complex phenotypes in homecage. Homecage automated open source behavioral testing sytem to enable high throughput 24h testing of many standard operant paradigms. Using Arduino platform and easily sourced inexpensive components system can display light cues and dispense liquid rewards and has nosepoke receptacles with infrared detectors for operant responses, within homecage.Method provided by Dartmouth College scientists. Behavioral testing system, homecage, Arduino platform, dispense liquid rewards, nosepoke receptacles, infrared detectors, OpenBehavior, Instrument is listed by: OpenBehavior
has parent organization: Dartmouth College; New Hampshire; USA
DOI:10.1523/eneuro.0160-20.2020 Free, Freely available SCR_021489 SciCrunch Registry DIY-NAMIC 2026-10-10 12:41:23 0
PROCESS
 
Resource Report
Resource Website
100+ mentions
PROCESS (RRID:SCR_021369) data analysis software, data processing software, software application, software resource Software tool as macro for SPSS, SAS, and R that conducts observed variable mediation, moderation, and conditional process analysis.Observed variable OLS and logistic regression path analysis modeling tool. Used for estimating direct and indirect effects in single and multiple mediator models parallel and serial, two and three way interactions in moderation models along with simple slopes and regions of significance for probing interactions, and conditional indirect effects in moderated mediation models with single or multiple mediators or moderators. Operates on Windows and Mac versions of SPSS and SAS. observed variable mediation, conditional process analysis, logistic regression path analysis, Free, Available for download, Freely available SCR_021369 SciCrunch Registry PROCESS v3, PROCESS v2 2026-10-10 12:41:29 132
Mousetrap
 
Resource Report
Resource Website
1+ mentions
Mousetrap (RRID:SCR_021523) data acquisition software, data analysis software, data processing software, software application, software resource Integrated, open source mouse tracking software package.Software plugin to record and analyze mouse movements in computerized lab experiments.Software plugin provides two items that implement mouse tracking in OpenSesame. Record mouse movements, analyze mouse movements, mouse tracking, OpenBehavior is related to: Mousetrap project DOI:10.3758/s13428-017-0900-z Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/mousetrap/ SCR_021523 SciCrunch Registry 2026-10-10 12:41:24 2
CapTouch project
 
Resource Report
Resource Website
CapTouch project (RRID:SCR_021488) data or information resource, instrument resource, portal, project portal Project related to study learning and memory in preclinical research.Included tracking system for object recognition tasks provides standardization across experiments and labs.Automates scoring process using capacitive sensors, while providing validated 3D-printed objects in order to standardize object recognition to study learning and memory in preclinical research.Used for accurate measurement of interaction time during object recognition tasks. Tracking system, object recognition tasks, standardization across experiments, automated scoring process, capacitive sensors, standardize object recognition, study learning and memory, accurate measurement, interaction time, OpenBehavior., Instrument is listed by: OpenBehavior DOI:10.1523/eneuro.0310-20.2020 Free, Freely available SCR_021488 SciCrunch Registry CapTouch 2026-10-10 12:41:29 0
Robotic Flower System for Bee Behavior project
 
Resource Report
Resource Website
Robotic Flower System for Bee Behavior project (RRID:SCR_021584) data or information resource, instrument resource, portal, project portal Portal provides system of robotic artificial flowers to study bumble bee behavior. System is designed to capture data when animal is feeding by placement of IR beams that are broken when engaged on flowers feeding mechanism and sends data to control unit.Developed by University of Oulu in Finland scientists. System includes control unit, separate artificial flowers, and personal computer. Control unit is to handle electronics of flowers, collect data from them, and to send data to computer. Flowers contain infrared sensor, their associated electronics, and electromechanical device that offers small, precise amount of sugar solution from reservoir. Computer runs software that controls refilling rate and data collection via the control unit. Circuit diagrams, parts list, and control software and source code are available in paper supplemental information. Robotic artificial flowers, study bumble bee behavior, animal feeding data, flowers feeding mechanism, OpenBehavior, Instrument is listed by: OpenBehavior DOI:10.1002/ece3.2062 Free, Freely available SCR_021584 SciCrunch Registry Robotic Flower System for Bee Behavior 2026-10-10 12:41:35 0
Homecage Task Training and Mesoscale Imaging project
 
Resource Report
Resource Website
Homecage Task Training and Mesoscale Imaging project (RRID:SCR_021580) data or information resource, instrument resource, portal, project portal Project to build and use new generation of home cages with emphasis on training for simple headfixed tasks during simultaneous autonomous acquisition of mesoscale brain imaging data. Homecage platform for automated task training and mesoscale brain imaging for mice developed by University of British Columbia scientists. Instrument, automated task training, mesoscale brain imaging, mice, OpenBehavior is listed by: OpenBehavior
is related to: AutoHeadFix
has parent organization: University of British Columbia; British Columbia; Canada
DOI:10.7554/elife.55964 Free, Freely available SCR_021580 SciCrunch Registry Homecage Task Training and Mesoscale Imaging 2026-10-10 12:41:54 0
OpenMV project
 
Resource Report
Resource Website
OpenMV project (RRID:SCR_021579) data or information resource, instrument resource, portal, project portal Portal provides system capable of frame differencing, color tracking, marker tracking, face detection, eye tracking, person detection (with TensorFlow Lite), and more. Supports very easy to use GUI, the OpenMV IDE. Instrument, frame differencing, color tracking, marker tracking, face detection, eye tracking, person detection, OpenBehavior is listed by: OpenBehavior
is related to: OpenMV
Free, Freely available SCR_021579 SciCrunch Registry OpenMV system 2026-10-10 12:41:35 0
Tetroplater
 
Resource Report
Resource Website
Tetroplater (RRID:SCR_021578) data or information resource, instrument resource, portal, project portal Portal provides open source circuit for microwire tetrode gold plating. Circuit includes impedance meter and current generator for tetrode gold plating. Developed by University of Toyama scientist. Instrument, neuronal activity, recording neuronal activity, microwire tetrode gold plating, OpenBehavior is listed by: OpenBehavior DOI:10.3791/1098 Free, Freely available SCR_021578 SciCrunch Registry 2026-10-10 12:41:26 0
Pulse Pal
 
Resource Report
Resource Website
Pulse Pal (RRID:SCR_021611) software resource Software tool as part of Pulse Pal system which allows users to create and trigger software defined trains of voltage pulses with high temporal precision. voltage pulses, pulse train generator, OpenBehavior is listed by: OpenBehavior
is related to: Pulse Pal project
Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/pulse-pal/ SCR_021611 SciCrunch Registry 2026-10-10 12:41:36 0
OpenSpritzer
 
Resource Report
Resource Website
OpenSpritzer (RRID:SCR_021575) data or information resource, instrument resource, portal, project portal Portal provides open hardware used in labs for administering picoliters of liquid to biological samples. Pressure ejection system developed by University of Sussex scientist for reliably delivering picolitre volumes. Instrument, administering picoliters of liquid, pressure ejection system, delivering picolitre volumes, OpenBehavior is listed by: OpenBehavior
has parent organization: University of Sussex; Brighton; United Kingdom
DOI:10.1038/s41598-017-02301-2 Free, Freely available SCR_021575 SciCrunch Registry 2026-10-10 12:41:34 0
Pulse Pal project
 
Resource Report
Resource Website
Pulse Pal project (RRID:SCR_021576) data or information resource, instrument resource, portal, project portal Portal provides open source, low cost, programmable pulse train generator for physiology and behavior. Device allows users to create and trigger software defined trains of voltage pulses with high temporal precision. Arduino powered device that generates precise sequences of voltage pulses for neural stimulation and stimulus control. Controlled either through its APIs in MATLAB, Python and C plus plus, or as stand-alone instrument using its oLED screen and clickable thumb joystick. Instrument, pulse train generator, Arduino powered device, neural stimulation, stimulus control, OpenBehavior is listed by: OpenBehavior
is related to: Pulse Pal
Free, Freely available SCR_021576 SciCrunch Registry Pulse Pal system, Pulse Pal generator 2026-10-10 12:41:54 0
MouseMove
 
Resource Report
Resource Website
MouseMove (RRID:SCR_021618) data analysis software, data processing software, software application, software resource Open source program for semi automated analysis of movement and cognitive testing in rodents. Accurately quantifies numerous parameters of movement including travel distance, speed, turning, stationary fraction and laterality. Part of MouseMove system. Semi automated analysis, movement analysis, movement parameters quantification, OpenBehavior is listed by: OpenBehavior
is related to: MouseMove project
DOI:10.1038/srep16171 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/mousemove/ SCR_021618 SciCrunch Registry 2026-10-10 12:41:26 0
TRIO Platform
 
Resource Report
Resource Website
TRIO Platform (RRID:SCR_021596) data or information resource, instrument resource, portal, project portal Portal provides low profile in vivo imaging support and restraint system for mice. System is compact and provides sturdy head fixation, gas anesthesia mask, and warm water bed. Compact design allows to work with variety of microscope stages and use of 3D printed components makes this design customizable. Instrument, mice neural function, imaging support, restraint system, fixation, gas anesthesia mask, warm water bed, OpenBehavior is listed by: OpenBehavior DOI:10.3389/fnins.2016.00169 Free, Freely available SCR_021596 SciCrunch Registry Three-In-One Platform 2026-10-10 12:41:54 0
Visual Discrimination with an iPad
 
Resource Report
Resource Website
Visual Discrimination with an iPad (RRID:SCR_021593) data or information resource, instrument resource, portal, project portal Portal provides touchscreen platform developed by Texas Christian University scientists. iPad apparatus set up consists of four wall operant chamber, remote desktop program, Visual Basic 6 software, and single wireless iPad. Wireless iPad allows for flexibility in setups during performing visual discrimination behavioral experiments. Instrument, iPad apparatus, four wall operant chamber, remote desktop program, Visual Basic 6 software, wireless iPad, visual discrimination tasks, OpenBehavior is listed by: OpenBehavior
has parent organization: Texas Christian University; Fort Worth; USA
DOI:10.1016/j.beproc.2012.11.013 Free, Freely available http://www.drkennethleising.com/research/tbes/ SCR_021593 SciCrunch Registry 2026-10-10 12:41:30 0
StimDuino
 
Resource Report
Resource Website
StimDuino (RRID:SCR_021594) data or information resource, instrument resource, portal, project portal Portal provides Arduino controlled stimulus isolator that allows for highly accurate, reproducible automated setting of stimulation currents. Automatic stimulation patterns are software controlled and parameters are set from Matlab coded simple, intuitive and user friendly graphical user interface. Instrument, Arduino controlled stimulus isolator, reproducible automated setting, stimulation currents, OpenBehavior DOI:10.1016/j.jneumeth.2015.01.016 Free, Freely available SCR_021594 SciCrunch Registry 2026-10-10 12:41:26 0
SpikeGadgets
 
Resource Report
Resource Website
1+ mentions
SpikeGadgets (RRID:SCR_021623) commercial organization Company to design and sell powerful neuroscience hardware that interfaces with open source software platform supported by large community of scientists and developers. Support efforts of open source community in commercially sustainable way. Open Behavior is listed by: OpenBehavior SCR_021623 SciCrunch Registry SpikeGadgets 2026-10-10 12:41:26 1
Michigan Technological University; Houghton; USA
 
Resource Report
Resource Website
Michigan Technological University; Houghton; USA (RRID:SCR_021621) data or information resource, portal, topical portal Public research university founded in 1885. is parent organization of: Pearce Lab Syringe Pump project
is parent organization of: Michigan Technological University Materials Characterization and Fabrication Core Facility
SCR_021621 SciCrunch Registry 2026-10-10 12:41:55 0
CHEndoscope
 
Resource Report
Resource Website
1+ mentions
CHEndoscope (RRID:SCR_021587) data or information resource, instrument resource, portal, project portal Portal provides open source Compact Head Mounted Endoscope for imaging in freely behaving mouse. Includes accessible and flexible set of calcium imaging tools for neuroscience research community. Instrument, compact head mounted endoscope, imaging in awake behaving mouse, OpenBehavior. is listed by: OpenBehavior
is related to: chendoscope
DOI:10.1002/cpns.51 Free, Freely available SCR_021587 SciCrunch Registry Compact Head Mounted Endoscope 2026-10-10 12:41:30 2

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