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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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neurotic Resource Report Resource Website |
neurotic (RRID:SCR_021406) | data analysis software, data processing software, software application, software resource, software toolkit | Software Python toolbox for interactive characterization in neuroscience.Users can read in variety of file formats for neural data and video, which they can then process, filter, analyze, annotate and plot.Used to review and annotate signal data synchronized with video, performs simple initial analyses including signal filtering and spike detection, supports variety of file formats.Facilitates collaborations by using portable specification for loading and processing data and retrieving data files from online sources.App for Windows, macOS, and Linux to review and annotate electrophysiology data and simultaneously captured video. | Anotate electrophysiology data, interactive characterization, neural data and video, signal data, signal filtering, spike detection, OpenBehavior |
is listed by: OpenBehavior is related to: neurotic project |
DOI:10.1523/eneuro.0085-20.2020 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/neurotic/ | SCR_021406 | SciCrunch Registry | NEUROscience Tool for Interactive Characterization | 2026-10-10 12:41:22 | 0 | |||||||
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Optimouse Resource Report Resource Website 1+ mentions |
Optimouse (RRID:SCR_021527) | data analysis software, data processing software, software application, software resource | Software tool for analysis of mouse position data.Open source software to analyze positions of individual mice, specifically their nose positions, in behavioral arena with the goal of minimizing error. | Mouse position data analysis, mouse position, position data, nose position, OpenBehavior |
is listed by: OpenBehavior is related to: Optimouse project |
DOI:10.1186/s12915-017-0377-3 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/optimouse/ | SCR_021527 | SciCrunch Registry | 2026-10-10 12:41:29 | 2 | ||||||||
|
DIY-NAMIC project Resource Report Resource Website |
DIY-NAMIC project (RRID:SCR_021489) | data or information resource, instrument resource, portal, project portal | Project is related to measurement of complex phenotypes in homecage. Homecage automated open source behavioral testing sytem to enable high throughput 24h testing of many standard operant paradigms. Using Arduino platform and easily sourced inexpensive components system can display light cues and dispense liquid rewards and has nosepoke receptacles with infrared detectors for operant responses, within homecage.Method provided by Dartmouth College scientists. | Behavioral testing system, homecage, Arduino platform, dispense liquid rewards, nosepoke receptacles, infrared detectors, OpenBehavior, Instrument |
is listed by: OpenBehavior has parent organization: Dartmouth College; New Hampshire; USA |
DOI:10.1523/eneuro.0160-20.2020 | Free, Freely available | SCR_021489 | SciCrunch Registry | DIY-NAMIC | 2026-10-10 12:41:23 | 0 | ||||||||
|
PROCESS Resource Report Resource Website 100+ mentions |
PROCESS (RRID:SCR_021369) | data analysis software, data processing software, software application, software resource | Software tool as macro for SPSS, SAS, and R that conducts observed variable mediation, moderation, and conditional process analysis.Observed variable OLS and logistic regression path analysis modeling tool. Used for estimating direct and indirect effects in single and multiple mediator models parallel and serial, two and three way interactions in moderation models along with simple slopes and regions of significance for probing interactions, and conditional indirect effects in moderated mediation models with single or multiple mediators or moderators. Operates on Windows and Mac versions of SPSS and SAS. | observed variable mediation, conditional process analysis, logistic regression path analysis, | Free, Available for download, Freely available | SCR_021369 | SciCrunch Registry | PROCESS v3, PROCESS v2 | 2026-10-10 12:41:29 | 132 | ||||||||||
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Mousetrap Resource Report Resource Website 1+ mentions |
Mousetrap (RRID:SCR_021523) | data acquisition software, data analysis software, data processing software, software application, software resource | Integrated, open source mouse tracking software package.Software plugin to record and analyze mouse movements in computerized lab experiments.Software plugin provides two items that implement mouse tracking in OpenSesame. | Record mouse movements, analyze mouse movements, mouse tracking, OpenBehavior | is related to: Mousetrap project | DOI:10.3758/s13428-017-0900-z | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/mousetrap/ | SCR_021523 | SciCrunch Registry | 2026-10-10 12:41:24 | 2 | ||||||||
|
CapTouch project Resource Report Resource Website |
CapTouch project (RRID:SCR_021488) | data or information resource, instrument resource, portal, project portal | Project related to study learning and memory in preclinical research.Included tracking system for object recognition tasks provides standardization across experiments and labs.Automates scoring process using capacitive sensors, while providing validated 3D-printed objects in order to standardize object recognition to study learning and memory in preclinical research.Used for accurate measurement of interaction time during object recognition tasks. | Tracking system, object recognition tasks, standardization across experiments, automated scoring process, capacitive sensors, standardize object recognition, study learning and memory, accurate measurement, interaction time, OpenBehavior., Instrument | is listed by: OpenBehavior | DOI:10.1523/eneuro.0310-20.2020 | Free, Freely available | SCR_021488 | SciCrunch Registry | CapTouch | 2026-10-10 12:41:29 | 0 | ||||||||
|
Robotic Flower System for Bee Behavior project Resource Report Resource Website |
Robotic Flower System for Bee Behavior project (RRID:SCR_021584) | data or information resource, instrument resource, portal, project portal | Portal provides system of robotic artificial flowers to study bumble bee behavior. System is designed to capture data when animal is feeding by placement of IR beams that are broken when engaged on flowers feeding mechanism and sends data to control unit.Developed by University of Oulu in Finland scientists. System includes control unit, separate artificial flowers, and personal computer. Control unit is to handle electronics of flowers, collect data from them, and to send data to computer. Flowers contain infrared sensor, their associated electronics, and electromechanical device that offers small, precise amount of sugar solution from reservoir. Computer runs software that controls refilling rate and data collection via the control unit. Circuit diagrams, parts list, and control software and source code are available in paper supplemental information. | Robotic artificial flowers, study bumble bee behavior, animal feeding data, flowers feeding mechanism, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1002/ece3.2062 | Free, Freely available | SCR_021584 | SciCrunch Registry | Robotic Flower System for Bee Behavior | 2026-10-10 12:41:35 | 0 | ||||||||
|
Homecage Task Training and Mesoscale Imaging project Resource Report Resource Website |
Homecage Task Training and Mesoscale Imaging project (RRID:SCR_021580) | data or information resource, instrument resource, portal, project portal | Project to build and use new generation of home cages with emphasis on training for simple headfixed tasks during simultaneous autonomous acquisition of mesoscale brain imaging data. Homecage platform for automated task training and mesoscale brain imaging for mice developed by University of British Columbia scientists. | Instrument, automated task training, mesoscale brain imaging, mice, OpenBehavior |
is listed by: OpenBehavior is related to: AutoHeadFix has parent organization: University of British Columbia; British Columbia; Canada |
DOI:10.7554/elife.55964 | Free, Freely available | SCR_021580 | SciCrunch Registry | Homecage Task Training and Mesoscale Imaging | 2026-10-10 12:41:54 | 0 | ||||||||
|
OpenMV project Resource Report Resource Website |
OpenMV project (RRID:SCR_021579) | data or information resource, instrument resource, portal, project portal | Portal provides system capable of frame differencing, color tracking, marker tracking, face detection, eye tracking, person detection (with TensorFlow Lite), and more. Supports very easy to use GUI, the OpenMV IDE. | Instrument, frame differencing, color tracking, marker tracking, face detection, eye tracking, person detection, OpenBehavior |
is listed by: OpenBehavior is related to: OpenMV |
Free, Freely available | SCR_021579 | SciCrunch Registry | OpenMV system | 2026-10-10 12:41:35 | 0 | |||||||||
|
Tetroplater Resource Report Resource Website |
Tetroplater (RRID:SCR_021578) | data or information resource, instrument resource, portal, project portal | Portal provides open source circuit for microwire tetrode gold plating. Circuit includes impedance meter and current generator for tetrode gold plating. Developed by University of Toyama scientist. | Instrument, neuronal activity, recording neuronal activity, microwire tetrode gold plating, OpenBehavior | is listed by: OpenBehavior | DOI:10.3791/1098 | Free, Freely available | SCR_021578 | SciCrunch Registry | 2026-10-10 12:41:26 | 0 | |||||||||
|
Pulse Pal Resource Report Resource Website |
Pulse Pal (RRID:SCR_021611) | software resource | Software tool as part of Pulse Pal system which allows users to create and trigger software defined trains of voltage pulses with high temporal precision. | voltage pulses, pulse train generator, OpenBehavior |
is listed by: OpenBehavior is related to: Pulse Pal project |
Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/pulse-pal/ | SCR_021611 | SciCrunch Registry | 2026-10-10 12:41:36 | 0 | |||||||||
|
OpenSpritzer Resource Report Resource Website |
OpenSpritzer (RRID:SCR_021575) | data or information resource, instrument resource, portal, project portal | Portal provides open hardware used in labs for administering picoliters of liquid to biological samples. Pressure ejection system developed by University of Sussex scientist for reliably delivering picolitre volumes. | Instrument, administering picoliters of liquid, pressure ejection system, delivering picolitre volumes, OpenBehavior |
is listed by: OpenBehavior has parent organization: University of Sussex; Brighton; United Kingdom |
DOI:10.1038/s41598-017-02301-2 | Free, Freely available | SCR_021575 | SciCrunch Registry | 2026-10-10 12:41:34 | 0 | |||||||||
|
Pulse Pal project Resource Report Resource Website |
Pulse Pal project (RRID:SCR_021576) | data or information resource, instrument resource, portal, project portal | Portal provides open source, low cost, programmable pulse train generator for physiology and behavior. Device allows users to create and trigger software defined trains of voltage pulses with high temporal precision. Arduino powered device that generates precise sequences of voltage pulses for neural stimulation and stimulus control. Controlled either through its APIs in MATLAB, Python and C plus plus, or as stand-alone instrument using its oLED screen and clickable thumb joystick. | Instrument, pulse train generator, Arduino powered device, neural stimulation, stimulus control, OpenBehavior |
is listed by: OpenBehavior is related to: Pulse Pal |
Free, Freely available | SCR_021576 | SciCrunch Registry | Pulse Pal system, Pulse Pal generator | 2026-10-10 12:41:54 | 0 | |||||||||
|
MouseMove Resource Report Resource Website |
MouseMove (RRID:SCR_021618) | data analysis software, data processing software, software application, software resource | Open source program for semi automated analysis of movement and cognitive testing in rodents. Accurately quantifies numerous parameters of movement including travel distance, speed, turning, stationary fraction and laterality. Part of MouseMove system. | Semi automated analysis, movement analysis, movement parameters quantification, OpenBehavior |
is listed by: OpenBehavior is related to: MouseMove project |
DOI:10.1038/srep16171 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/mousemove/ | SCR_021618 | SciCrunch Registry | 2026-10-10 12:41:26 | 0 | ||||||||
|
TRIO Platform Resource Report Resource Website |
TRIO Platform (RRID:SCR_021596) | data or information resource, instrument resource, portal, project portal | Portal provides low profile in vivo imaging support and restraint system for mice. System is compact and provides sturdy head fixation, gas anesthesia mask, and warm water bed. Compact design allows to work with variety of microscope stages and use of 3D printed components makes this design customizable. | Instrument, mice neural function, imaging support, restraint system, fixation, gas anesthesia mask, warm water bed, OpenBehavior | is listed by: OpenBehavior | DOI:10.3389/fnins.2016.00169 | Free, Freely available | SCR_021596 | SciCrunch Registry | Three-In-One Platform | 2026-10-10 12:41:54 | 0 | ||||||||
|
Visual Discrimination with an iPad Resource Report Resource Website |
Visual Discrimination with an iPad (RRID:SCR_021593) | data or information resource, instrument resource, portal, project portal | Portal provides touchscreen platform developed by Texas Christian University scientists. iPad apparatus set up consists of four wall operant chamber, remote desktop program, Visual Basic 6 software, and single wireless iPad. Wireless iPad allows for flexibility in setups during performing visual discrimination behavioral experiments. | Instrument, iPad apparatus, four wall operant chamber, remote desktop program, Visual Basic 6 software, wireless iPad, visual discrimination tasks, OpenBehavior |
is listed by: OpenBehavior has parent organization: Texas Christian University; Fort Worth; USA |
DOI:10.1016/j.beproc.2012.11.013 | Free, Freely available | http://www.drkennethleising.com/research/tbes/ | SCR_021593 | SciCrunch Registry | 2026-10-10 12:41:30 | 0 | ||||||||
|
StimDuino Resource Report Resource Website |
StimDuino (RRID:SCR_021594) | data or information resource, instrument resource, portal, project portal | Portal provides Arduino controlled stimulus isolator that allows for highly accurate, reproducible automated setting of stimulation currents. Automatic stimulation patterns are software controlled and parameters are set from Matlab coded simple, intuitive and user friendly graphical user interface. | Instrument, Arduino controlled stimulus isolator, reproducible automated setting, stimulation currents, OpenBehavior | DOI:10.1016/j.jneumeth.2015.01.016 | Free, Freely available | SCR_021594 | SciCrunch Registry | 2026-10-10 12:41:26 | 0 | ||||||||||
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SpikeGadgets Resource Report Resource Website 1+ mentions |
SpikeGadgets (RRID:SCR_021623) | commercial organization | Company to design and sell powerful neuroscience hardware that interfaces with open source software platform supported by large community of scientists and developers. Support efforts of open source community in commercially sustainable way. | Open Behavior | is listed by: OpenBehavior | SCR_021623 | SciCrunch Registry | SpikeGadgets | 2026-10-10 12:41:26 | 1 | ||||||||||
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Michigan Technological University; Houghton; USA Resource Report Resource Website |
Michigan Technological University; Houghton; USA (RRID:SCR_021621) | data or information resource, portal, topical portal | Public research university founded in 1885. |
is parent organization of: Pearce Lab Syringe Pump project is parent organization of: Michigan Technological University Materials Characterization and Fabrication Core Facility |
SCR_021621 | SciCrunch Registry | 2026-10-10 12:41:55 | 0 | ||||||||||||
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CHEndoscope Resource Report Resource Website 1+ mentions |
CHEndoscope (RRID:SCR_021587) | data or information resource, instrument resource, portal, project portal | Portal provides open source Compact Head Mounted Endoscope for imaging in freely behaving mouse. Includes accessible and flexible set of calcium imaging tools for neuroscience research community. | Instrument, compact head mounted endoscope, imaging in awake behaving mouse, OpenBehavior. |
is listed by: OpenBehavior is related to: chendoscope |
DOI:10.1002/cpns.51 | Free, Freely available | SCR_021587 | SciCrunch Registry | Compact Head Mounted Endoscope | 2026-10-10 12:41:30 | 2 |
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