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http://www.aoos.org/

Portal for ocean and coastal observations data. They address regional and national needs for ocean information, gather specific data on key coastal and ocean variables, and ensure timely and sustained dissemination and availability of these data. . AOOS programmatic focus areas are: * Safe marine operations * Coastal hazard mitigation * Tracking ecosystem and climate trends * Monitoring water quality

Proper citation: Alaska Ocean Observing System (RRID:SCR_010481) Copy   

•   Source: SciCrunch Registry

http://www.dfg.de/en/index.jsp

German research awards.Central self governing research funding organisation in Germany. Serves sciences and humanities and promotes research at universities and non-university research institutions. The focus is on funding projects developed by academic community.

Proper citation: German Research Foundation (RRID:SCR_012420) Copy   

•   Source: SciCrunch Registry

http://www.jisc.ac.uk/

Joint Information Systems Committee (JISC) is the UK''s expert on information and digital technologies for education and research. JISC inspires UK colleges and universities in the innovative use of digital technologies, helping to maintain the UK''s position as a global leader in education. JISC helps institutions make best use of technology to manage all aspects of their business. JISC provides access to the world-class Janet (UK) network, quality digital resources and a range of specialist advisory services. JISC provides: * A world-class network - JANET * Access to electronic resources * New environments for learning, teaching and research * Guidance on institutional change * Advisory and consultancy services * Regional support - JISC RSCs Partnerships JISC develops partnerships to enable the UK education and research communities to engage in national and global collaborations to overcome the challenges of delivering world-class ICT solutions and services. Funding Opportunities JISC funds a wide range of infrastructure, services, innovative projects and studies. A large number of these originate from a successful response to a grant funding call (previously known as a JISC Circular), inviting eligible HE and FE institutions to bid for project funding. JISC also procures other activities (usually studies such as an evaluation or market research), through invitations to tender which are available to other organizations to bid against. JISC is the name of our organization. Historically, it stood for Joint Information Systems Committee.

Proper citation: JISC (RRID:SCR_011331) Copy   

•   Source: SciCrunch Registry

https://www.nasw.org

Association whose goal is to foster the spread of accurate scientific information.

Proper citation: National Association of Science Writers (RRID:SCR_014929) Copy   

•   Source: SciCrunch Registry

https://www.nihstrokenet.org/#annotations:4TlyYopcEeaUdC-3RQ97KQ

NIH network designed to follow and help conduct clinical trials and research studies investigating acute stroke treatment, stroke prevention, and stroke recovery and rehabilitation. Clinical trials are listed once they are reviewed, approved, and ready for volunteer recruitment.

Proper citation: NIH StrokeNet (RRID:SCR_014648) Copy   

•   Source: SciCrunch Registry

https://www.broadinstitute.org/ccle/

A collaborative project between the Broad Institute and the Novartis Institutes for Biomedical Research and its Genomics Institute of the Novartis Research Foundation, with the goal of conducting a detailed genetic and pharmacologic characterization of a large panel of human cancer models. The CCLE also works to develop integrated computational analyses that link distinct pharmacologic vulnerabilities to genomic patterns and to translate cell line integrative genomics into cancer patient stratification. The CCLE provides public access to genomic data, analysis and visualization for about 1000 cell lines.

Proper citation: Cancer Cell Line Encyclopedia (RRID:SCR_013836) Copy   

•   Source: SciCrunch Registry

http://expertnet.org

A portal that connects users to reserch expertise and resources within Florida's universities. Users can search for experts (principal investigators), funded research projects, centers and institutes, technology licensing opportunities, speakers, and instructional programs.

Proper citation: Florida ExpertNet (RRID:SCR_013959) Copy   

•   Source: SciCrunch Registry

http://www.rarekidneystones.org

An organization of various participants and independent efforts representing four major diseases of hereditary nephrolithiasis. The Consortium facilitates cooperative exchange of information and resources among investigators, clinicians, patients, and researchers in order to improve care and outcomes for patients with rare stone diseases. The consortium promotes ready availability of diagnostic testing, pooling of clinical experiences, and availability of tissue banks in order to advance the science.

Proper citation: Rare Kidney Stone Consortium (RKSC) (RRID:SCR_014413) Copy   

•   Source: SciCrunch Registry

http://www.ucl.ac.uk/ploras#annotations:QXuC2C7REeaxtw-aEPo07Q

A research project investigating the difficulties of recovering language after stroke (aphasia). The overall aim of the study is to give future stroke survivors accurate predictions of their aphasia recovery by creating clinical tools and discerning why some patients recover from aphasia better than others.

Proper citation: Predicting Language Outcome and Recovery After Stroke (PLORAS) (RRID:SCR_014498) Copy   

•   Source: SciCrunch Registry

http://lincsportal.ccs.miami.edu/dcic-portal/

Portal which provides a unified interface for searching LINCS dataset packages and reagents. Users can use the portal to access datasets, small molecules, cells, genes, proteins and peptides, and antibodies.

Proper citation: LINCS Data Portal (RRID:SCR_014939) Copy   

•   Source: SciCrunch Registry

http://iclac.org

An independent committee established to improve visibility of cell lines and promote awareness and authentication testing to combat false or misidentified cell lines. It contains a databases of cross-contaminated or otherwise misidentified cell lines, as well as resources to familiarize users of cell lines and the problem of misidentification. Their Terms of Reference defines false or misidentified cell lines and other commonly used terms, as well as sets out the committee goals and ground rules.

Proper citation: International Cell Line Authentication Committee (RRID:SCR_014414) Copy   

•   Source: SciCrunch Registry

http://www.researchconnection.com

THIS RESOURCE IS NO LONGER IN SERVICE. Documented June 21, 2018.

A service resource and collaboration tool which connects academically affiliated researchers to undergraduate and graduate students. Researchers can advertise their lab and open positions as well as organize and manage applicants. Students can browse labs based on university and field(s) of interest and apply directly for lab positions or jobs. Universities must officially partner with ResearchConnection to advertise labs.

Proper citation: ResearchConnection (RRID:SCR_013965) Copy   

•   Source: SciCrunch Registry

https://singlecell.broadinstitute.org/single_cell

Portal specializes in visualizing and disseminating single cell data. Allows you to use natural language and faceted search to discover other scientists’ research and share your own findings. Each study includes information on cell types, singular or multiple gene expression, and spatial transcriptomics. Interactive visualizations allow to explore cell clusters and search for related genes.

Proper citation: Single Cell Portal (RRID:SCR_014816) Copy   

•   Source: SciCrunch Registry

http://becs.aalto.fi/en/research/bayes/drifter/

Model based Bayesian method for eliminating physiological noise from fMRI data. This algorithm uses image voxel analysis to isolate the cardiac and respiratory noise from the relevant data.

Proper citation: DRIFTER (RRID:SCR_014937) Copy   

•   Source: SciCrunch Registry

https://grade.bsc.gwu.edu/web/grade/home

A comparative study that aims to determine which combination of two medications is best for glycemic control in Type 2 Diabetes, has the fewest side effects, and is the most beneficial for overall health. GRADE is a randomized clinical trial of participants diagnosed with type 2 diabetes within the past 10 years who are already on metformin. Participants will be randomly assigned to 1 of 4 commonly-used glucose-lowering drugs (glimepiride, sitagliptin, liraglutide, and basal insulin glargine), plus metformin, and will be followed for up to 7 years.

Proper citation: Glycemic Reduction Approaches in Diabetes: A Comparative Effectiveness Study (GRADE) (RRID:SCR_014384) Copy   

•   Source: SciCrunch Registry

https://www.janelia.org/confocal-imagery-management-and-analysis-tools

A discovery platform used to analyze and annotate imagery for individual projects, while assembling shared data resources. It was originally applied to Drosophila neuronal anatomy and neuroblast lineage analysis and is currently being extended to support mouse whole-brain projection tracing. The Workstation is both a pipeline management system that extracts entities from 3D imagery and a suite of tools that enable scientists to annotate large imagery datasets. A Entity-Attribute-Value (EAV) graph permits any element to be annotated by users with custom ontologies. By allowing any entity to have multiple parents, the graph can be re-arranged by each user without copying the underlying image data.

Proper citation: Janelia Workstation (RRID:SCR_014302) Copy   

•   Source: SciCrunch Registry

http://www.3dhistech.com/pannoramic_viewer

Software tool as a digital virtual microscope for viewing and moving scanned histological slides and for making annotations and measurements on them. Used in digital pathology. Helps to simplify the areas of the pathology workflow where imaging, slide digitization, storage, archivation, visualization and analysis are performed.

Proper citation: Pannoramic Viewer (RRID:SCR_014424) Copy   

•   Source: SciCrunch Registry

http://ambermd.org/

Software package of molecular simulation programs. It is distributed into AmberTools15 and Amber14. AmberTools15 is a software package which can carry out complete molecular dynamics simulations with either explicit water or generalized Born solvent models. It is distributed in source code format and must be compiled in order to be used. Amber14 builds on AmberTools15 by adding the pmemd program, which provides better performance on multiple CPUs and dramatic speed improvements on GPUs compared to sander (molecular dynamics). GPU info, manuals, and tutorials are available on the website.

Proper citation: Assisted Model Building with Energy Refinement (AMBER) (RRID:SCR_014230) Copy   

•   Source: SciCrunch Registry

http://sharedresources.fredhutch.org/core-facilities/cceh-administration

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July,27,2022. Core facility that provides scientific and budgetary oversight for all CCEH activities. This includes training programs, high school summer internships, and and pilot and feasibility program for new projects.

Proper citation: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology (RRID:SCR_015320) Copy   

•   Source: SciCrunch Registry

http://snap-graph.sourceforge.net

SNAP (Small-world Network Analysis and Partitioning) is an extensible parallel framework for exploratory analysis and partitioning of large-scale networks. SNAP is implemented in C, uses OpenMP primitives for parallelization, and targets sequential, multicore, and symmetric multiprocessor platforms. Our intent with SNAP is to provide a simple and intuitive interface for network analysis and application design, hiding the parallel programming complexity from the user. In addition to path-based, centrality, and community identification queries on large-scale graphs, we support commonly-used preprocessing kernels and quantitative measures that help understand the global network topology. The latest version of SNAP (0.4) was released in August 2010. Sponsors: This work was supported in part by NSF Grants CAREER CCF-0611589, NSF DBI-0420513, ITR EF/BIO 03-31654, IBM Faculty Fellowship and Microsoft Research grants, NASA grant NP-2005-07-375-HQ, and DARPA Contract NBCH30390004. Keywords: network, analysis, software, graph, traversal, betweenness centrality, community, identification, multicore,

Proper citation: Small-world Network Analysis and Partitioning (RRID:SCR_013662) Copy   

•   Source: SciCrunch Registry