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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Kannisto-Thatcher Database on Old Age Mortality
 
Resource Report
Resource Website
1+ mentions
Kannisto-Thatcher Database on Old Age Mortality (RRID:SCR_008936) K-T database data or information resource, database A database that includes data on death counts and population counts classified by sex, age, year of birth, and calendar year for more than 30 countries. This database was established for estimating the death rates at the highest ages (above age 80). The core set of data in the database was assembled, tested for quality, and converted into cohort mortality histories by V��in�� Kannisto, the former United Nations advisor on demographic and social statistics. Comparable materials on England and Wales, was made available by A. Roger Thatcher, the former Director of the Office of Population Censuses and Surveys and Registrar-General of England and Wales (Kannisto, 1994). The Kannisto-Thatcher database was computerized under the supervision of James W. Vaupel at the Aging Research Unit of the Centre for Health and Social Policy at Odense University Medical School in 1993. Currently, the database is maintained by the Max Planck Institute for Demographic Research, Germany. mortality, death, population, late adult human, international has parent organization: Max Planck Institute for Demographic Research; Mecklenburg-Vorpommern; Germany Aging, Death Danish Research Councils ;
NIA
Public; must register and agree to terms. For scientific purposes only. nlx_151834 SCR_008936 Kannisto-Thatcher Database on Old Age Mortality at the Max Planck Institute for Demographic Research 2026-08-29 11:30:29 1
Riken BRC Cell Bank
 
Resource Report
Resource Website
10+ mentions
Riken BRC Cell Bank (RRID:SCR_010553) biomaterial supply resource, material resource, tissue bank Not yet vetted by NIF curator nlx_42614 SCR_010553 2026-08-29 11:30:34 19
DaTo
 
Resource Report
Resource Website
10+ mentions
DaTo (RRID:SCR_010280) DaTo data or information resource, database A biological database and software tool catalog based on text mined and human annotated url mentions in PubMed abstracts. Data are annotated as to the author''''s country of origin and url status is checked. metadata, catalog, text mining is related to: Cytoscape
is related to: PubMed
has parent organization: Zhejiang University; Zhejiang; China
National Natural Science Foundation of China 30971743;
National Natural Science Foundation of China 31371328
nlx_157296 SCR_010280 DA&TO - The Atlas of biology databases and tools, DAandTO, Da&To 2026-08-29 11:30:21 12
Nordic Genetic Resource Centre (Plants)
 
Resource Report
Resource Website
Nordic Genetic Resource Centre (Plants) (RRID:SCR_010529) biomaterial supply resource, material resource, tissue bank THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 18,2023. THIS RESOURCE IS NO LONGER IN SERVICE nlx_22485 SCR_010529 2026-08-29 11:30:22 0
CiteAb
 
Resource Report
Resource Website
50+ mentions
CiteAb (RRID:SCR_009653) CiteAb data or information resource, database Citation-ranked antibody search engine that provides a simple way to find antibodies that work. They use the number of citations as a transparent method to rank antibodies. Nobody can pay to be ranked higher. They are always looking for more commercial and academic antibodies to make CiteAb better. There is no charge to list. antibody, search engine, citation is listed by: FORCE11
is related to: PubMed
has parent organization: University of Bath; North East Somerset; United Kingdom
Free, The community can contribute to this resource nlx_156037 http://www.force11.org/node/4768 SCR_009653 CiteAb: The Antibody Search Engine 2026-08-29 11:30:30 55
Project Tycho
 
Resource Report
Resource Website
1+ mentions
Project Tycho (RRID:SCR_010489) data or information resource, database Database to advance the availability and use of public health data for science and policy making that includes data from all weekly notifiable disease reports for the United States dating back to 1888. Additional U.S. and international data will be released twice yearly. population, disease, metadata standard, vaccination, public health data, health, incidence rate, death, statistics has parent organization: University of Pittsburgh; Pennsylvania; USA Smallpox, Polio, Measles, Mumps, Rubella, Hepatitis A, Whooping cough, Diphtheria, Etc. Bill and Melinda Gates Foundation ;
NIH
PMID:24283231
PMID:24611167
Account required, Creative Commons Attribution License nlx_157982, r3d100011948 SCR_010489 Project Tycho Data for Health 2026-08-29 11:30:32 3
PROTOTYPE - Suspected Overlap Among OBO Foundry Candidate Ontologies
 
Resource Report
Resource Website
1+ mentions
PROTOTYPE - Suspected Overlap Among OBO Foundry Candidate Ontologies (RRID:SCR_008834) PROTOTYPE Suspected Overlap Among OBO Foundry Candidate Ontologies analysis service resource, data analysis service, production service resource, service resource THIS RESOURCE IS NO LONGER IN SERVCE, documented September 2, 2016. Service that determines the Suspected Overlap Among OBO Foundry Candidate Ontologies. has parent organization: National Center for Biomedical Ontology THIS RESOURCE IS NO LONGER IN SERVICE nlx_144632 SCR_008834 2026-08-29 11:30:28 2
Channelrhodopsin-2 enables optical activation of neurons
 
Resource Report
Resource Website
1+ mentions
Channelrhodopsin-2 enables optical activation of neurons (RRID:SCR_008833) Channelrhodopsin-2 enables optical activation of neurons material service resource, production service resource, resource, service resource Laser tool that enables neurons to be optically silenced by pulses of yellow light, the light-activated chloride pump halorhodopsin (Halo), in a paper entitled Multiple-color optical activation, silencing, and desynchronization of neural activity, with single-spike temporal resolution. Temporally precise, noninvasive control of activity in well-defined neuronal populations is a long-sought goal of systems neuroscience. We adapted for this purpose the naturally occurring algal protein Channelrhodopsin-2, a rapidly gated light-sensitive cation channel, by using lentiviral gene delivery in combination with high-speed optical switching to photostimulate mammalian neurons. We demonstrate reliable, millisecond-timescale control of neuronal spiking, as well as control of excitatory and inhibitory synaptic transmission. This technology allows the use of light to alter neural processing at the level of single spikes and synaptic events, yielding a widely applicable tool for neuroscientists and biomedical engineers. The quest to determine how precise neural activity patterns mediate computation, behavior, and pathology would be greatly aided by a set of tools for reliably activating and inactivating genetically targeted neurons, in a temporally precise and rapidly reversible fashion. Having earlier adapted a light-activated cation channel, 1channelrhodopsin-2 (ChR2), for allowing neurons to be stimulated by blue light, we searched for a complementary tool that would enable optical neuronal inhibition, driven by light of a second color. Here we report that targeting the 1codon-optimized form of the light-driven chloride pump halorhodopsin from the archaebacterium Natronomas pharaonis (hereafter abbreviated Halo) to genetically-specified neurons enables them to be silenced reliably, and reversibly, by millisecond-timescale pulses of yellow light. We show that trains of yellow and blue light pulses can drive high-fidelity sequences of hyperpolarizations and depolarizations in neurons simultaneously expressing yellow light-driven Halo and blue light-driven ChR2, allowing for the first time manipulations of neural synchrony without perturbation of other parameters such as spiking rates. The Halo/ChR2 system thus constitutes a powerful toolbox for multichannel photoinhibition and photostimulation of virally or transgenically targeted neural circuits without need for exogenous chemicals, enabling systematic analysis and engineering of the brain, and quantitative bioengineering of excitable cells. hardware, instrument, equipment has parent organization: Massachusetts Institute of Technology; Massachusetts; USA; Anonymous donor ;
MIT Media Lab ;
Helen Hay Whitney Foundation
PMID:17375185 nlx_144630 http://channelrhodopsin.org SCR_008833 2026-08-29 11:30:02 3
Functional Neurogenesis
 
Resource Report
Resource Website
1+ mentions
Functional Neurogenesis (RRID:SCR_008830) Functional Neurogenesis blog, data or information resource, narrative resource A blog focusing on the function of adult neurogenesis in the dentate gyrus of the hippocampus, including discussion of scientific research papers, methods and protocols, and other trends or observations about the field. adult, neurogenesis, dentate gyrus, hippocampus, brain, neuron, anxiety, depressive disorder, memory, plasticity nlx_144587 SCR_008830 Functional Neurogenesis - New neurons in the adult brain. How they work and what they are good for. 2026-08-29 11:30:20 2
Pediatric Imaging Neurocognition and Genetics
 
Resource Report
Resource Website
50+ mentions
Pediatric Imaging Neurocognition and Genetics (RRID:SCR_008953) PING data or information resource, database A large multi-site pediatric MRI and genetics data resource to facilitate studies of the genomic landscape of the developing human brain. It includes information about the developing mental and emotional functions of the children to understand the genetic basis of individual differences in brain structure and connectivity, cognition, and personality. Investigators on the project are studying 1400 children between the ages of 3 and 20 years so that links between genetic variation and developing patterns of brain connectivity can be examined. Investigators interested in the effects of a particular gene will be able to search the database for any brain areas or connections between areas that differ as a function of variation in a particular gene, and also to determine if the genes appear to affect the course of brain development at some point during childhood. A data exploration tool has been created for mapping and analyzing MRI data sets collected for PING and related developmental studies. Approved investigators will be able to view raw image sets and derived 3D brain maps of MRI and DTI data, conduct hypothesis testing, and graph brain area measures as they change across the time course of development. PING Cores * Coordinating Core: Functions include project management, screening of participants and maintaining the database * Neuroimaging Core: applying a standardized high-resolution structural MRI protocol involving 3-D T1-weighted scans, a T2-weighted volume, and a set of diffusion-weighted scans with multiple b values and diffusion directions, scans to estimate MRI relaxation rates, and gradient echo EPI scans for resting state fMRI. Importantly, adaptive motion compensation, using ����??PROMO����??, a novel real-time motion correction algorithm will be used. Specific PING protocols for each scanner manufacturer: ** PING MRI Protocol - GE ** PING MRI Protocol - Philips ** PING MRI Protocol - Siemens * Assessment Core: Cognitive assessments for the PING project are conducted using the NIH Toolbox for Cognition. * Genomics Core: functions as a central repository for receipt of saliva samples collected for each study participant. Once received, samples are catalogued, maintained, and DNA is extracted using state-of-the-field laboratory techniques. Ultimately, genome-wide genotyping is performed on the extracted DNA using the Illumina Human660W-Quad BeadChip. PING involves 10 sites throughout the country including UCSD, University of Hawaii, Scripps Genomics, UCLA, UC Davis, Kennedy Krieger Institute/Johns Hopkins, Sacker Institute/Cornell University, University of Massachusetts, Massachusetts General Hospital/Harvard, and Yale. Families who may want to participate in the study, or others who want to know more about it, may email questions to ping (at) ucsd.edu. pediatric, neuroimaging, genetics, child, early adult human, adolescent, genetic variant, magnetic resonance imaging, brain, gene, brain structure, connectivity, function, brain development, cognition, experimental protocol, saliva, dna, diffusion tensor imaging, image, genotype, dicom, imaging genomics, magnetic resonance, nifti, FASEB list is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
is related to: NIH Toolbox - Assessment of Neurological and Behavioral Function
has parent organization: University of California at San Diego; California; USA
has parent organization: Multimodal Imaging Laboratory
NIDA ;
ARRA ;
NICHD
Data Use Agreement required. nlx_151904 http://www.nitrc.org/projects/ping http://ping.chd.ucsd.edu/ SCR_008953 PING Study, Pediatric Imaging Neurocognition and Genetics (PING) 2026-08-29 11:30:20 80
Search Orphan Drug Designations and Approvals
 
Resource Report
Resource Website
1+ mentions
Search Orphan Drug Designations and Approvals (RRID:SCR_010256) data or information resource, database Database of Orphan Drug Product designations. Searches may be run by entering the product name, orphan designation, and dates. Results can be displayed as a condensed list, detailed list, or an Excel spreadsheet. has parent organization: U.S. Food and Drug Administration nlx_156908 SCR_010256 2026-08-29 11:30:04 6
Dangerous Ideas
 
Resource Report
Resource Website
Dangerous Ideas (RRID:SCR_010531) data or information resource, discussion, narrative resource THIS RESOURCE IS NO LONGER IN SERVICE This is the website for a weekly social event called Dangerous Ideas, to promote more cross talk and cross pollination of ideas. There is a list of links to interesting new tools and technologies in the realm of computation and science. We'll be experimenting with webcasting this so others who can't physically join us can share in seeing what we think is cool. Its a completely open event-- anyone is welcome to join in, but should be prepared to present! has parent organization: University of California at San Diego; California; USA THIS RESOURCE IS NO LONGER IN SERVICE nlx_22882 SCR_010531 2026-08-29 11:30:22 0
AnimalDrugsatFDA
 
Resource Report
Resource Website
AnimalDrugsatFDA (RRID:SCR_010257) data or information resource, database THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 23,2022. Database of approved veterinary drugs run by the FDA. has parent organization: U.S. Food and Drug Administration THIS RESOURCE IS NO LONGER IN SERVICE nlx_156909 SCR_010257 animal drugs at FDA, animaldrugs@fda 2026-08-29 11:30:31 0
Genetic Alterations in Cancer
 
Resource Report
Resource Website
Genetic Alterations in Cancer (RRID:SCR_010533) GAC data or information resource, database THIS RESOURCE IS NO LONGER IN SERVICE, documented August 22, 2016. The NIEHS Genetic Alterations in Cancer (GAC) knowledgebase is a comprehensive collection of data compiled from studies reported in the published literature on genetic alterations in tumors associated with exposure to specific chemical, physical, or biological agents that can be linked to genes implicated in the development of cancers. GAC provides access to data from peer reviewed journals for hundreds of studies of gene mutations, loss of heterozygosity, and/or chromosome changes in tumors from humans, mice, or rats. Results are summarized in tables and graphic profiles that show the incidence (percent) of tumors with alterations in each gene that has been studied. Detailed data tables display results for each subject studied in the cited reference and the reference ID is hyperlinked to its PubMed abstract for more information. A mutation spectrum for individual genes and links to gene information from The Cancer Genome Anatomy Project and the Rat Genome Database are also provided. has parent organization: National Institute of Environmental Health Sciences PMID:16410370 THIS RESOURCE IS NO LONGER IN SERVICE nlx_23898 http://www.niehs.nih.gov/research/resources/databases/gac/index.cfm SCR_010533 2026-08-29 11:30:04 0
Brains Lab
 
Resource Report
Resource Website
Brains Lab (RRID:SCR_010534) Brains Lab blog, data or information resource, narrative resource I''m studying how the brain works on various levels; this blog chronicles some of my informal notes along the way. I previously went to Vassar College, majoring in Neuroscience and Behavior with a minor in Math. Now I work at a biology lab in Maryland. I appreciate any feedback that you may have, good or bad. You can email me at amckenz at g mail dot com. What I write on here is obviously my opinion. Everything on the site is filed under a Creative Commons License v. 3.0. That means that you can copy and re-publish this stuff anywhere without my permission. Thanks for reading. Essay titles include: * A Loss of Agency Following Use of ADHD Medications in College Aged Adults * An Evolutionary Account of the Environmentally Programmed Stress Response * Changes in protein structure of myelin sheaths throughout vertebrate evolution * Effect of Glucocorticoids on the Attenuation in Neurogenesis due to Sleep Deprivation * Insulin sensitivity and age-related memory changes due to caloric restriction * Is Neurogenesis in the Hippocampus Linked to Depression? * Novelty-Seeking and Associative Learning of Chemotaxis in C. Elegans * The Effects of D2 Receptors on the Inverted U-Shape Response Curve to Psychostimulants * Three Applications of Optogenetics The author has included some tricks and illusions from around the web that reveal fascinating facets of our thought processes including: The Checker, Sensory Homonculus Picture, A Blindspot Demonstration, A Ball in a Box, Iterated Choices, The Max Plank Institute for Biological Cybernetics, The Motion Aftereffect Illusion, The Phi Phenomenon, The Common Fate Phenomenon, A Double Face, The Troxler Effect brain imaging, brain-computer interface, cognitive psychology, connectomics, developmental neuroscience, evolutionary biology, molecular neuroscience, neurogenesis, neurogenetics, neuropharmacology, neurotransmitter, theoretical neuroscience, trend, neuroscience, vision, synapse, somata, systems neuroscience has parent organization: WordPress Aging nlx_24102 SCR_010534 Brains Lab: Synapses Somata and Systems Neuroscience 2026-08-29 11:30:22 0
Functional ROI Atlas
 
Resource Report
Resource Website
Functional ROI Atlas (RRID:SCR_009481) Functional ROI Atlas atlas, data or information resource An effort to provide a set of quasi-probabilistic atlases for established functional ROIs in the human neuroimaging literature. Many atlases exist for various anatomical parcellation schemes, such as the Brodmann areas, the structural atlases, tissue segmentation atlases, etc. To date, however, there is no atlas for so-called functional ROIs. Such fROIs are typically associated with an anatomical label of some kind (e.g. the _fusiform_ face area), but these labels are only approximate and can be misleading inasmuch as fROIs are not constrained by anatomical landmarks, whether cytoarchitectonic or based on sulcal and gyral landmarks. The goal of this project is to provide quasi-probabilistic atlases for fROIs that are based on published coordinates in the neuroimaging literature. This is an open-ended enterprise and the atlas can grow as needed. Members of the neuroscience and neuroimaging community interested in contributing to the project are encouraged to do so. magnetic resonance, nifti, functional roi, region of interest, neuroimaging is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) GNU General Public License, The community can contribute to this resource nlx_155628 SCR_009481 2026-08-29 11:30:30 0
Nomenclature for the description of sequence variants
 
Resource Report
Resource Website
100+ mentions
Nomenclature for the description of sequence variants (RRID:SCR_010261) MUTNOMEN data or information resource, database Database of gene mutation nomenclature. has parent organization: Human Genome Variation Society PMID:10612815 nlx_156915 SCR_010261 2026-08-29 11:30:21 460
Omixon blog
 
Resource Report
Resource Website
Omixon blog (RRID:SCR_010020) Omixon blog blog, data or information resource, narrative resource We share commentaries, news and announcement that advance our goal of helping clinical labs to adopt next generation sequencing for the analysis of diagnostic gene targets. is listed by: OMICtools OMICS_01720 SCR_010020 2026-08-29 11:30:30 0
New York University Specialty Tissue Banks
 
Resource Report
Resource Website
New York University Specialty Tissue Banks (RRID:SCR_010540) biomaterial supply resource, material resource, tissue bank THIS RESOURCE IS NO LONGER IN SERVICE, documented August 22, 2016. THIS RESOURCE IS NO LONGER IN SERVICE nlx_26476 http://ci.med.nyu.edu/research/facilities/tissue-acquisition-and-banking-services-tabs/contact-information SCR_010540 2026-08-29 11:30:22 0
Census Microdata Samples Project
 
Resource Report
Resource Website
Census Microdata Samples Project (RRID:SCR_008902) Census Microdata Samples Project data or information resource, database A data set of cross-nationally comparable microdata samples for 15 Economic Commission for Europe (ECE) countries (Bulgaria, Canada, Czech Republic, Estonia, Finland, Hungary, Italy, Latvia, Lithuania, Romania, Russia, Switzerland, Turkey, UK, USA) based on the 1990 national population and housing censuses in countries of Europe and North America to study the social and economic conditions of older persons. These samples have been designed to allow research on a wide range of issues related to aging, as well as on other social phenomena. A common set of nomenclatures and classifications, derived on the basis of a study of census data comparability in Europe and North America, was adopted as a standard for recoding. This series was formerly called Dynamics of Population Aging in ECE Countries. The recommendations regarding the design and size of the samples drawn from the 1990 round of censuses envisaged: (1) drawing individual-based samples of about one million persons; (2) progressive oversampling with age in order to ensure sufficient representation of various categories of older people; and (3) retaining information on all persons co-residing in the sampled individual''''s dwelling unit. Estonia, Latvia and Lithuania provided the entire population over age 50, while Finland sampled it with progressive over-sampling. Canada, Italy, Russia, Turkey, UK, and the US provided samples that had not been drawn specially for this project, and cover the entire population without over-sampling. Given its wide user base, the US 1990 PUMS was not recoded. Instead, PAU offers mapping modules, which recode the PUMS variables into the project''''s classifications, nomenclatures, and coding schemes. Because of the high sampling density, these data cover various small groups of older people; contain as much geographic detail as possible under each country''''s confidentiality requirements; include more extensive information on housing conditions than many other data sources; and provide information for a number of countries whose data were not accessible until recently. Data Availability: Eight of the fifteen participating countries have signed the standard data release agreement making their data available through NACDA/ICPSR (see links below). Hungary and Switzerland require a clearance to be obtained from their national statistical offices for the use of microdata, however the documents signed between the PAU and these countries include clauses stipulating that, in general, all scholars interested in social research will be granted access. Russia requested that certain provisions for archiving the microdata samples be removed from its data release arrangement. The PAU has an agreement with several British scholars to facilitate access to the 1991 UK data through collaborative arrangements. Statistics Canada and the Italian Institute of statistics (ISTAT) provide access to data from Canada and Italy, respectively. * Dates of Study: 1989-1992 * Study Features: International, Minority Oversamples * Sample Size: Approx. 1 million/country Links: * Bulgaria (1992), http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/02200 * Czech Republic (1991), http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/06857 * Estonia (1989), http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/06780 * Finland (1990), http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/06797 * Romania (1992), http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/06900 * Latvia (1989), http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/02572 * Lithuania (1989), http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/03952 * Turkey (1990), http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/03292 * U.S. (1990), http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/06219 housing condition, international, minority, population, census, census data, social, economic, middle adult human, late adult human, social science, behavioral science, housing census, social condition, economic condition is listed by: Inter-university Consortium for Political and Social Research (ICPSR)
is related to: National Archive of Computerized Data on Aging (NACDA)
Aging, Social phenomena United Nations Population Fund ;
NIA ;
United Nations Economic Commission for Europe
Variable nlx_151430 SCR_008902 Status of Older Persons in UNECE Countries, Dynamics of Population Aging in ECE Countries, PAU Census Microdata Samples Project, Population Activities Unit Census Microdata Samples Project, Dynamics of Population Aging in Economic Commission for Europe Countries 2026-08-29 11:30:28 0

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