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http://www.vinnova.se/en/

Swedish agency whose mission is to promote sustainable growth by improving the conditions for innovation, as well as funding needs-driven research. They promote collaborations between companies, universities, research institutes and the public sector by stimulating a greater use of research, by making long-term investment in strong research and innovation environments and by developing catalytic meeting places. Their activities also focus on strengthening international cooperation.

Proper citation: VINNOVA (RRID:SCR_011765) Copy   

•   Source: SciCrunch Registry

http://www.wehi.edu.au/

Medical research institute in Australia that researches and develops treatments for cancer, infectious diseases and chronic inflammatory diseases.

Proper citation: Walter and Eliza Hall Institute of Medical Research; Victoria; Australia (RRID:SCR_011773) Copy   

•   Source: SciCrunch Registry

http://www.uwyo.edu/pharmacy/

The University of Wyoming School of Pharmacy was founded in 1946. The school aims to help improve the quality of health care in Wyoming by graduating students who can provide primary pharmaceutical care in a rural and frontier environment, as well as in cities. Students receive a strong background in the pharmaceutical sciences on which to build clinical expertise. Complementing this, early in the curriculum students are exposed to pharmacy practice environments and seminars focusing on contemporary issues. Throughout the curriculum, faculty members integrate the teaching and application of critical-thinking skills, decision-making skills, and professional communication techniques as applied to pharmacy practice. This culminates in the final year with a series of rotations in diverse settings throughout Wyoming, Colorado, and beyond.

Proper citation: University of Wyoming School of Pharmacy (RRID:SCR_011750) Copy   

•   Source: SciCrunch Registry

http://i122server.vu-wien.ac.at/CANGS1.1/

A user-friendly utility for processing and analyzing 454 GS-FLX data in biodiversity studies.

Proper citation: CANGS (RRID:SCR_011837) Copy   

•   Source: SciCrunch Registry

http://www.utexas.edu/pharmacy/

The College of Pharmacy at The University of Texas at Austin is one of the premier institutions of pharmaceutical education and research in the country. Our college is a national leader in pharmacy education with a curriculum designed to prepare pharmacy graduates for lifelong learning and leadership capabilities as drug therapy managers in the nation's healthcare system. The pharmacist of the 21st century has significant responsibility for managing drug therapy, counseling patients on proper use of medications, and monitoring drug therapy outcomes.

Proper citation: University of Texas at Austin College of Pharmacy (RRID:SCR_011717) Copy   

•   Source: SciCrunch Registry

http://code.google.com/p/condetri/

Software tool as content dependent read trimmer for Illumina data. Content dependent read trimming software for Illumina/Solexa sequencing data.

Proper citation: ConDeTri (RRID:SCR_011838) Copy   

•   Source: SciCrunch Registry

http://circos.ca/

A software package for visualizing data and information. It visualizes data in a circular layout - this makes Circos ideal for exploring relationships between objects or positions.

Proper citation: Circos (RRID:SCR_011798) Copy   

•   Source: SciCrunch Registry

https://tennessee.edu/

University of Tennessee System is comprised of campuses at Knoxville, Chattanooga, Pulaski and Martin; Health Science Center at Memphis; Space Institute at Tullahoma; and statewide Institute of Agriculture and Institute for Public Service.

Proper citation: University of Tennessee; Tennessee; USA (RRID:SCR_011712) Copy   

•   Source: SciCrunch Registry

http://www.usciences.edu/academics/collegesDepts/pcp.aspx

Pharmaceutical education began at Philadelphia College of Pharmacy (PCP), the first such institution in North America. With nearly two centuries of experience in pharmacy and science and thousands of alumni working in the healthcare industry, the world turns to PCP graduates for advice. From undergraduate majors to graduate degrees to our esteemed PharmD program, you can learn where the founders (alumni such as McNeil, Lilly, Rorer, Wyeth, Warner, Burroughs, and Wellcome) of six of the top pharmaceutical companies in the world got their education. Since 1821, they have been preparing professionals in pharmacy practice, science, and health care. There is no better place than PCP to prepare you for a lifelong career in the healthcare industry.

Proper citation: University of the Sciences in Philadelphia College of Pharmacy (RRID:SCR_011728) Copy   

•   Source: SciCrunch Registry

https://github.com/najoshi/sabre

Software tool to demultiplex barcoded reads into separate files. Works on both single-end and paired-end data in fastq format. Used in next generation sequencing to analyze a broad range of data.

Proper citation: sabre (RRID:SCR_011843) Copy   

•   Source: SciCrunch Registry

https://github.com/hyattpd/Prodigal

Software tool for protein coding gene prediction for prokaryotic genomes.

Proper citation: Prodigal (RRID:SCR_011936) Copy   

•   Source: SciCrunch Registry

http://www.ebi.ac.uk/~zerbino/oases/

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on February 28,2023. Software tool as de novo transcriptome assembler designed to produce transcripts from short read sequencing technologies, such as Illumina, SOLiD, or 454 in the absence of any genomic assembly.

Proper citation: Oases (RRID:SCR_011896) Copy   

•   Source: SciCrunch Registry

http://opal.biology.gatech.edu/GeneMark/

A family of gene prediction programs developed at Georgia Institute of Technology.

Proper citation: GeneMark (RRID:SCR_011930) Copy   

•   Source: SciCrunch Registry

http://cbcb.umd.edu/software/metAMOS

A modular and open source metagenomic assembly and analysis pipeline.

Proper citation: MetAMOS (RRID:SCR_011914) Copy   

•   Source: SciCrunch Registry

https://www.genome-cloud.com/user/

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 29, 2019. A cloud platform for next-generation sequencing analysis and storage. Services include: * g-Analysis: Automated genome analysis pipelines at your fingertips * g-Cluster: Easy-of-use and cost-effective genome research infrastructure * g-Storage: A simple way to store, share and protect data * g-Insight: Accurate analysis and interpretation of biological meaning of genome data

Proper citation: GenomeCloud (RRID:SCR_011886) Copy   

•   Source: SciCrunch Registry

http://kissplice.prabi.fr/

Software tool that enables analysis of RNA-seq data with or without reference genome. Local transcriptome assembler for SNPs, indels and AS events.

Proper citation: KisSplice (RRID:SCR_011893) Copy   

•   Source: SciCrunch Registry

http://uc-echo.sourceforge.net/

Error correction algorithm designed for short-reads from next-generation sequencing platforms such as Illumina''s Genome Analyzer II.

Proper citation: ECHO (RRID:SCR_011851) Copy   

•   Source: SciCrunch Registry

http://calpain.org/predict.rb?cls=substrate

Calpain cleavage prediction using multiple kernel learning.

Proper citation: CaMPDB (RRID:SCR_011976) Copy   

•   Source: SciCrunch Registry

http://www.ngsleaders.org/

A community created to advance the use and value of next-generation sequencing through knowledge sharing.

Proper citation: NGS Leaders (RRID:SCR_011982) Copy   

•   Source: SciCrunch Registry

http://stackoverflow.com/

A question and answer site for professional and enthusiast programmers.

Proper citation: Stack Overflow (RRID:SCR_011984) Copy   

•   Source: SciCrunch Registry