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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
http://www.waksman.rutgers.edu/genomics/home
Equipped with NextSeq500, MiSeq, and Ion Proton performs de novo genome sequencing, genome resequencing, ChIP-Seq and RNA-seq. Performs library construction, template preparation and sequencing of libraries or provides training in library preparation methods.Performs procedures to enrich or remove polyadenylated RNA, rRNA and/or tRNA as needed. Provides bioinformatics support for projects,data management and analysis plan before selecting samples and initiating data collection.
Proper citation: Rutgers University Waksman Institute of Microbiology Genomics Core Facility (RRID:SCR_011042) Copy
https://www.urmc.rochester.edu/research/rochester-genomics-center.aspx
Provides core laboratory support, technical consultation, assistance with experimental design and data analysis for investigators using high throughput genomic sequencing, genotyping and gene expression in their research programs.Provides support for RNA-Seq, ATAC-seq, ChIP-Seq, Single Cell RNA-seq, Spatial Transcriptomics, Exome/Genome sequencing, Whole Genome and Reduced Representation Bisulfite Sequencing (WGBS, RRBS), 16S rRNA Sequencing, Small RNA-Seq, Metatranscriptomics, qRT-PCR, processing of RNA/DNA, as well as custom applications and approaches. Bioinformatic analysis support is also available.
Proper citation: University of Rochester Genomics Research Center Core Facility (RRID:SCR_012359) Copy
http://www.montana.edu/massspec/index.html
Provides access to mass spectrometers and mass spectrometry expertise. The facility currently maintains the following equipment Waters Synapt-XS Q-IMS-TOF with Waters I-Class UHPLC; Agilent 6538 Q-TOF with Agilent 1290 UHPLC;Agilent 7800 Inductively Coupled Plasma with Laser Ablation (193 nm);Bruker micrOTOF with Agilent 1290 UHPLC; Agilent 6490 Triple Quadrupole Mass Spectrometer; Bruker MALDI Autoflex; Agilent GC-MS; Waters Synapt G2S-i Q-TOF with Ion Mobility.
Proper citation: Montana State University Mass Spectrometry Core Facility (RRID:SCR_012482) Copy
https://www.urmc.rochester.edu/research/flow-core.aspx
Provides investigators with instrumentation along with expertise. Core instrumentation includes traditional analytical cytometers, full spectrum cytometer, cell sorters, imaging cytometers, small(nano) particle detection system, metabolomics instrument, and mass cytometer.
Proper citation: University of Rochester Medical Center Flow Cytometry Core Facility (RRID:SCR_012360) Copy
https://www.urmc.rochester.edu/research/electron-microscope.aspx
Electron Microscopy Resource supports ultra-structural interrogation of tissues, biologic solutions and nanomaterials for investigators utilizing transmission electron microscopy (TEM), scanning electron microscopy (SEM) and cryo-TEM.
Proper citation: University of Rochester Medical Center Electron Microscopy Core Facility (RRID:SCR_012366) Copy
Core provides molecular biotechnology services and current molecular genetic methods. Services include DNA and RNA Extraction, transgenic mouse genotyping, Human Cell line Authentication, Sanger DNA Sequencing, Next-Generation sequencing platforms, Microsatellite DNA Typing, Agena multiplex SNP Genotyping, Real-time PCR, NanoString Gene Expression Analysis. Specializes in custom workflows that couple services with specific research needs.
Proper citation: Arizona Genetics Core (RRID:SCR_012429) Copy
https://cancer.dartmouth.edu/scientists-researchers/clinical-pharmacology
Supports Dartmouth Cancer Center investigators in design, performance, data analysis, and interpretation of pharmacology objectives in preclinical, clinical and epidemiological studies.
Proper citation: Dartmouth College Clinical Pharmacology Shared Resource Core Facility (RRID:SCR_000873) Copy
https://www.ohsu.edu/histopathology-core
Provides routine and customized histology and immunohistochemistry services critical for progress of biomedical research.
Proper citation: OHSU Histopathology Shared Resource Core Facility (RRID:SCR_009977) Copy
https://www.ohsu.edu/gene-profiling-shared-resource
Full service genomics facility providing research scientists and clinicians with services for RNA expression profiling, DNA variation analysis, and nucleic acid extraction.
Proper citation: OHSU Gene Profiling Shared Resource Core Facility (RRID:SCR_009975) Copy
https://www.ohsu.edu/multiscale-microscopy-core
Multiscale Microscopy Core at OHSU is electron microscopy core that provides services and training to academic and corporate users.
Proper citation: Oregon Health and Science University Multiscale Microscopy Core Facility (RRID:SCR_009969) Copy
https://www.ohsu.edu/advanced-light-microscopy-core
Provides confocal image analysis and presentation training, microscope training, microscope access service, deconvolution training, super resolution imaging and training service. Offers research scientists access to high-end instrumentation for fluorescence microscopy. Offers support with image acquisition, processing, analysis and presentation.
Proper citation: OHSU Advanced Light Microscopy Core Facility (RRID:SCR_009961) Copy
https://www.ohsu.edu/xd/research/research-cores/advanced-computing-center/index.cfm
Provides technology solutions to meet non enterprise IT needs across OHSU for healthcare including limited clinical research project support, academic, and research missions. ACC is also home to Exacloud HPC cluster.
Proper citation: OHSU Advanced Computing Center Core Facility (RRID:SCR_009959) Copy
https://www.ohsu.edu/research-cores/massively-parallel-sequencing-shared-resource-mpssr
As of January 1, 2024, the Integrated Genomics Laboratory is one shared resource comprising the former Massively Parallel Sequencing Shared Resource, the Gene Profiling Shared Resource, and the DNA Services Core. Please be aware that the reorganization is an ongoing process, particularly regarding our iLab integration.Provides RNA-sequencing for gene expression analysis, DNA resequencing for single nucleotide polymorphism discovery, DNA resequencing for copy number variation discovery, ChiP-sequencing for promoter analysis, DNA methylation analysis, De novo sequencing for unique genomes, Sequence capture service. Offers sequencing including genome resequencing, transcriptome analysis, miRNA analysis, and prometer analysis via ChIP-seq.
Proper citation: OHSU Massively Parallel Sequencing Shared Resource Core Facility (RRID:SCR_009984) Copy
https://www.unmc.edu/vcr/cores/vcr-cores/animal-behavior/index.html
Provides investigators with expertise, equipment, and space that is required to conduct innovative acoustic, behavioral, and cognitive research with focus on rigor, reproducibility, and maintaining the highest standards of animal welfare.
Proper citation: University of Nebraska Medical Center Animal Behavior Core Facility (RRID:SCR_018830) Copy
Core provides researchers with flow cytometry and mass cytometry services and equipment and help from highly trained and experienced staff.
Proper citation: Maryland University School of Medicine Flow Cytometry and Mass Cytometry Core Facility (RRID:SCR_018835) Copy
https://www.labx.com/product/sciex-api-5000
Triple quadrupole liquid chromatography mass spectrometer for analysis of bioanalytical samples. It can be used for DMPK and ADME studies.API 5000 LC/MS/MS System delivers the lowest limits of detection for the most demanding DMPK and ADME studies.
Proper citation: SCIEX:: API 5000 Triple Quadrupole Liquid Chromatography Mass Spectrometer System (RRID:SCR_018437) Copy
Core facility is equipped with instrumentation to support proteomic and metabolomic research, as well as equipment for materials characterization. Key instruments include a Bruker 700MHz NMR, two Bruker XRDs (Powder and Crystal), and Bruker Micro ToF mass spectrometer.
Proper citation: Claflin University Molecular Science Research Center Core Facility (RRID:SCR_018836) Copy
http://tools.thermofisher.com/content/sfs/manuals/cms_041850.pdf
Automated peptide synthesizer for chain assembly steps in solid phase peptide synthesis or FastMoc chemistry. Data is based on conductance or ultraviolet UV absorbance of reagent, solutions, and solvents in the synthesis cycle.
Proper citation: Thermo Fisher: Applied Biosystems: 433A Peptide Sequencer (RRID:SCR_018440) Copy
https://fralinlifesci.vt.edu/core-services/mass-spectrometry-incubator.html
Facility supports Virginia Tech's research infrastructure as mass spectrometry analysis and education center. Provides training in sample preparation, instrument operation and data analysis, with strong emphasis on metadata and analytical requirements for publication of metabolomic and proteomic results.
Proper citation: Virginia Tech Mass Spectrometry Incubator Core Facility (RRID:SCR_017956) Copy
http://www.umass.edu/ials/mass-spectrometry
The mass spectrometry core facility offers instrumentation for characterizing elements and compounds across the entire mass range from quantitative metal analysis to intact protein mass measurement. Instrumentation is also available for proteomics, metabolomics, MALDI imaging and HDX-MS. Specialized mass spectrometers encompass variety of ionization techniques and separation devices to cover wide range of analytical capabilities. The facility accepts samples and will perform requested analysis. Staff can also offer training to conduct experimentation. Instrumentation include Bruker timsTOF fleX, Thermo Orbitrap Fusion, Bruker Microflex and ultrafleXtreme MALDI-TOF, Agilent GC-MS, Waters Xevo TQD with UPLC, Waters Synapt G2Si with full HDX automation, Perkin Elmer NexION ICP-MS
Proper citation: UMass Amherst Mass Spectrometry Core Facility (RRID:SCR_019063) Copy
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