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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Pittsburgh Center for Kidney Research
 
Resource Report
Resource Website
Pittsburgh Center for Kidney Research (RRID:SCR_015286) portal, topical portal, service resource, data or information resource, access service resource, resource, disease-related portal Center whose focus is to advance knowledge of normal kidney function, cellular mechanisms that contribute to kidney disease, and the myriad altered cellular functions that occur in the setting of renal insufficiency. kidney research, kidney disease and function, renal research is listed by: NIDDK Information Network (dkNET)
is parent organization of: Pittsburgh Center for Kidney Research Biostatistical Analysis Services
is parent organization of: Pittsburgh Center for Kidney Research Kidney Imaging
is parent organization of: Pittsburgh Center for Kidney Research Model Organisms
is parent organization of: Pittsburgh Center for Kidney Research Single Nephron and Metabolomics
is parent organization of: Pittsburgh Center for Kidney Research Cellular Physiology
has organization facet: Pittsburgh Center for Kidney Research Cellular Physiology
has organization facet: Pittsburgh Center for Kidney Research Single Nephron and Metabolomics
has organization facet: Pittsburgh Center for Kidney Research Kidney Imaging
has organization facet: Pittsburgh Center for Kidney Research Model Organisms
has organization facet: Pittsburgh Center for Kidney Research Biostatistical Analysis Services
is organization facet of: O'Brien Kidney Centers
kidney disease NIDDK P30DK079307;
University of Pittsburgh School of Medicine; Pennsylvania; USA ;
Icahn School of Medicine at Mount Sinai; New York; USA
Available to the research community SCR_015286 2026-08-11 09:43:00 0
Duke O'Brien Center for Kidney Research Animal Models Core
 
Resource Report
Resource Website
Duke O'Brien Center for Kidney Research Animal Models Core (RRID:SCR_015267) service resource, core facility, access service resource, resource Core facility that provides access to a range of experimental models of kidney, heart and vascular diseases. It also provides comprehensive phenotyping services for kidney functions, blood pressure and other cardiovascular functions. animal model, experimental kidney model, experimental heart model, experimental vascular model is listed by: NIDDK Information Network (dkNET)
has parent organization: Duke O'Brien Center for Kidney Research
has parent organization: Duke University School of Medicine; North Carolina; USA
has parent organization: Duke University; North Carolina; USA
is organization facet of: Duke O'Brien Center for Kidney Research
kidney disease, heart disease, hypertension, muscle disease NIDDK P30DK096493 Available to the research community SCR_015267 2026-08-11 09:43:00 0
Pittsburgh Center for Kidney Research Biostatistical Analysis Services
 
Resource Report
Resource Website
Pittsburgh Center for Kidney Research Biostatistical Analysis Services (RRID:SCR_015290) service resource, core facility, access service resource, resource THIS RESOURCE IS NO LONGER IN SERVICE, documented on Feb 16, 2022. Core that offers biostatistical analysis to users of the Pittsburgh Center for Kidney Research. Available to the Pittsburgh Center for Kidney Research community. administrative core, biostatistical analysis, kidney research is listed by: NIDDK Information Network (dkNET)
has parent organization: Pittsburgh Center for Kidney Research
is organization facet of: Pittsburgh Center for Kidney Research
NIDDK P30DK079307;
University of Pittsburgh School of Medicine; Pennsylvania; USA ;
Icahn School of Medicine at Mount Sinai; New York; USA
THIS RESOURCE IS NO LONGER IN SERVICE SCR_015290 2026-08-11 09:43:07 0
Kidney and Urinary Pathway Ontology
 
Resource Report
Resource Website
Kidney and Urinary Pathway Ontology (RRID:SCR_006690) KUPO data or information resource, controlled vocabulary, ontology Ontology describing kidney and urinary pathways cell, anatomy, and disease. kidney, urinary, pathway, urine, cell, anatomy, disease, owl is related to: NIDDK Information Network (dkNET) Public domain nlx_154154 SCR_006690 2026-08-09 09:04:34 0
Acute Kidney Injury Data Portal
 
Resource Report
Resource Website
Acute Kidney Injury Data Portal (RRID:SCR_024407) portal, topical portal, disease-related portal, data or information resource UK Renal Registry collection of data from acute kidney injury patients in England. UK Renal Registry, data collection, acute kidney injury patients, English patients, acute kidney injury Restricted SCR_024407 2026-08-11 09:44:51 0
Vanderbilt Mouse Kidney Physiology Core Lab
 
Resource Report
Resource Website
Vanderbilt Mouse Kidney Physiology Core Lab (RRID:SCR_010193) service resource, core facility, access service resource The objectives of the physiology core are to establish average values and normal ranges for physiologic parameters of renal function in mice, and to develop novel assays of mouse kidney structure and function. Our goal is to provide valuable institutional and national shared resources to facilitate better understanding of kidney diseases and treatments. is listed by: Eagle I
has parent organization: Vanderbilt University; Tennessee; USA
nlx_156672 SCR_010193 2026-08-11 09:42:12 0
George M. O'Brien Kidney Center at Yale
 
Resource Report
Resource Website
George M. O'Brien Kidney Center at Yale (RRID:SCR_015294) portal, topical portal, service resource, data or information resource, access service resource, resource, disease-related portal Center that facilitates translational and clinical research that will advance the prevention and treatment of kidney diseases. kidney disease, clinical research is listed by: NIDDK Information Network (dkNET)
has parent organization: Yale School of Medicine; Connecticut; USA
is parent organization of: George M. O'Brien Kidney Center at Yale Mouse Genetics and Cell Line Core
is parent organization of: George M. O'Brien Kidney Center at Yale Human Genetics and Clinical Research Core
is parent organization of: George M. O'Brien Kidney Center at Yale Renal Physiology Core
has organization facet: George M. O'Brien Kidney Center at Yale Renal Physiology Core
has organization facet: George M. O'Brien Kidney Center at Yale Mouse Genetics and Cell Line Core
has organization facet: George M. O'Brien Kidney Center at Yale Human Genetics and Clinical Research Core
is organization facet of: O'Brien Kidney Centers
kidney disease NIDDK P30DK079310 Available to the research community SCR_015294 2026-08-11 09:43:00 0
Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center Clinical and Translational Core Resource
 
Resource Report
Resource Website
Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center Clinical and Translational Core Resource (RRID:SCR_015291) service resource, core facility, access service resource, resource Core facility that provides clinical applications and methods to make kidney research translational and applicable to care settings. pkd, polycystic kidney disease, clinical research, translational research is listed by: NIDDK Information Network (dkNET)
has parent organization: University of Maryland School of Medicine; Maryland; USA
has parent organization: Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center
is organization facet of: Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center
Polycystic Kidney Disease NIDDK P30DK090868 Available to the research community SCR_015291 2026-08-11 09:43:00 0
Cancer Genomics of the Kidney (CAGEKID)
 
Resource Report
Resource Website
1+ mentions
Cancer Genomics of the Kidney (CAGEKID) (RRID:SCR_013670) CAGEKID data or information resource, consortium, portal, organization portal The Cancer Genomics of the Kidney (CAGEKID) consortium brings together expertise in clinical care and epidemiology with genomic expertise. This consortium is an effort of the larger International Cancer Genome Consortium (ICGC), which has the goal of obtaining a comprehensive description of genomic, transcriptomic and epigenomic changes in 50 different tumour types and/or subtypes with the aim of elucidating the genomic changes present in the many forms of cancers that contribute to the burden of disease throughout the world. kidney, biomarkers, data sharing, has parent organization: International Agency for Research on Cancer European Union FP7 SCR_013670 2026-08-11 09:42:39 4
Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center Antibody Validation and Vector Core
 
Resource Report
Resource Website
Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center Antibody Validation and Vector Core (RRID:SCR_015318) service resource, core facility, access service resource, resource Core which supports the work of the Baltimore Polycystic Kidney Disease research center by providing antibody validation services and vectors to researchers. pkd, polycystic kidney disease, antibody validation is listed by: NIDDK Information Network (dkNET)
has parent organization: University of Maryland School of Medicine; Maryland; USA
has parent organization: Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center
is organization facet of: Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center
Polycystic Kidney Disease NIDDK P30DK090868 Available to the research community, Fee for service SCR_015318 2026-08-11 09:43:01 0
Consortium for Radiologic Imaging Studies of Polycystic Kidney Disease
 
Resource Report
Resource Website
1+ mentions
Consortium for Radiologic Imaging Studies of Polycystic Kidney Disease (RRID:SCR_000690) CRISP clinical trial, resource A five-year prospective cohort study following 240 patients who have autosomal-dominant polycystic kidney disease (PKD) to determine whether changes in anatomic characteristics of their kidneys as measured by magnetic resonance imaging will be useful in providing surrogate measures for disease progression. CRISP's overall goal is to develop methods that would facilitate shortening the observation period necessary to determine efficacy of treatment interventions in PKD patients. Specific goals of this study are to: * Quantify cyst growth and ascertain severity of renal parenchymal involvement by sequential measurement of total kidney volume and the ratio of intact parenchyma to renal parenchyma occupied by cysts over time * Establish useful clinical correlations of imaging data with other markers of disease progression * Identify and test other potential markers or indices of disease progression, for example, assessment of loss of heterozygosity of renal cells shed in the urine, or other markers, in cohorts of patients with PKD * Gain information about the cost-effectiveness, patient acceptability, and advantages and disadvantages of different imaging techniques used serially in patients with PKD. Some experience has been gained in establishing that repeat imaging of the same PKD patient, using these techniques, yields reproducible estimates of kidney size and the proportion of renal parenchyma occupied by cysts. MRI may also have the advantage of permitting simultaneous estimation of GFR. Ultrasound has the advantage of being more cost-effective and perhaps more acceptable to patients for repetitive studies, but the measurements may be less accurate and reproducible. Nonetheless, there is very limited experience in applying these techniques to follow progression of the renal disease. Development of improved, reproducible imaging methods that assess cyst growth and provide markers of disease progression could markedly improve the feasibility of clinical trials. Participating clinical centers are Emory University, the Mayo Clinic, University of Kansas, and the University of Alabama at Birmingham. The data coordinating and imaging analysis center is at Washington University. (PI has since moved to University of Pittsburgh) The study found that kidney enlargement resulting from the expansion of cysts is continuous, quantifiable, and associated with the decline of renal function. Cystic expansion occurs at a consistent rate per individual, although it is heterogeneous in the population, and that larger kidneys are associated with more rapid decrease in renal function. These anatomic characteristics of patient kidneys may provide useful surrogate measures for disease progression, and hence enhance the development of targeted therapies for autosomal dominant PKD. CRISP III is a five-year prospective cohort study to follow ~170 remaining autosomal dominant polycystic kidney disease (ADPKD) patients who were part of the original CRISP cohort study. CRISP III will verify and extend the preliminary observations of CRISP to determine the extent to which quantitative (kidney volume and blood flow, and hepatic and kidney cyst volume) or qualitative (cyst distribution and character) structural parameters predict renal insufficiency and develop and test new metrics to quantify and monitor disease progression. Urine metabolites and the genome will be correlated with the progression of disease to look for new, predictive disease biomarkers. This information from CRISP III will help determine if the kidney enlargement, blood flow, cyst distribution, or urine metabolites can function as an informative surrogate measure for disease progression. mri, kidney volume, cyst volume, kidney, renal function, disease progression, measure, blood flow, hepatic cyst volume, kidney cyst volume, renal insufficiency, urine metabolite, surrogate measure, clinical, intervention is listed by: NIDDK Information Network (dkNET)
has parent organization: University of Pittsburgh; Pennsylvania; USA
Polycystic kidney disease, Autosomal dominant polycystic kidney disease NIDDK 5U01DK056961 THIS RESOURCE IS NO LONGER IN SERVICE nlx_152795 SCR_000690 Consortium of Radiologic Imaging Study of PKD 2026-08-11 09:40:12 3
George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Physiology Core
 
Resource Report
Resource Website
George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Physiology Core (RRID:SCR_015266) service resource, core facility, access service resource, resource Core that provides measurement of serum and or urine Creatinine by Capillary Electrophoresis, measurement of serum and urine citrate by capillary electrophoresis, Microanalysis of serum and urine electrolytes by: Flame photometry, Atomic absorption or Ion-Selective Electrode, and Klotho IP-IB Assay. physiology, kidney physiology, klotho assays is listed by: NIDDK Information Network (dkNET)
has parent organization: University of Texas Southwestern Medical Center; Texas; USA
has parent organization: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center
is organization facet of: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center
NIDDK P30DK079328 Available to the research community, Fee for service SCR_015266 2026-08-11 09:43:07 0
George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Cell Biology and Imaging Core
 
Resource Report
Resource Website
George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Cell Biology and Imaging Core (RRID:SCR_015297) service resource, core facility, access service resource, resource Core that provides services such as imaging of rodent kidney and heart including functional MRI, processing of tissues for routine paraffin embedding, and single tubule isolation and immunocytochemistry. cell imaging, cell biology, kidney function, pathology is listed by: NIDDK Information Network (dkNET)
has parent organization: University of Texas Southwestern Medical Center; Texas; USA
has parent organization: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center
is organization facet of: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center
NIDDK P30DK079328 Available to the research community, Fee for service SCR_015297 2026-08-11 09:43:00 0
Autosomal Recessive Polycystic Kidney Disease Mutation Database
 
Resource Report
Resource Website
10+ mentions
Autosomal Recessive Polycystic Kidney Disease Mutation Database (RRID:SCR_002290) service resource, data or information resource, storage service resource, database, data repository Catalog of all changes detected in PKHD1 (Polycystic Kidney and Hepatic Disease 1) in a locus specific database. Investigators are invited to submit their novel data to this database. These data should be meaningful for clinical practice as well as of relevance for the reader interested in molecular aspects of polycystic kidney disease (PKD). There are also some links and information for ARPKD patients and their parents. Autosomal recessive polycystic kidney disease (ARPKD/PKHD1) is an important cause of renal-related and liver-related morbidity and mortality in childhood. This study reports mutation screening in 90 ARPKD patients and identifies mutations in 110 alleles making up a detection rate of 61%. Thirty-four of the detected mutations have not been reported previously. Two underlying mutations in 40 patients and one mutation in 30 cases are disclosed, and no mutation was detected on the remaining chromosomes. Mutations were found to be scattered throughout the gene without evidence of clustering at specific sites. PKHD1 mutation analysis is a powerful tool to establish the molecular cause of ARPKD in a given family. Direct identification of mutations allows an unequivocal diagnosis and accurate genetic counseling even in families displaying diagnostic challenges. clinical, gene, genetic, mutation, protein, recessive, renal has parent organization: RWTH Aachen University; Aachen; Germany Autosomal recessive polycystic kidney disease, Polycystic kidney disease PMID:16199545
PMID:11919560
Permission required, Terms of use nif-0000-21038 http://www.humgen.rwth-aachen.de/index.asp?subform=database.html&nav=database_nav.html SCR_002290 Mutation Database Autosomal Recessive Polycystic Kidney Disease (ARPKD/PKHD1) 2026-08-11 09:40:35 14
Kidney and Urinary Pathway Knowledge Base
 
Resource Report
Resource Website
1+ mentions
Kidney and Urinary Pathway Knowledge Base (RRID:SCR_001746) KUPKB service resource, analysis service resource, data or information resource, storage service resource, data analysis service, production service resource, data repository, data set A collection of omics datasets (mRNA, proteins and miRNA) that have been extracted from PubMed and other related renal databases, all related to kidney physiology and pathology giving KUP biologists the means to ask queries across many resources in order to aggregate knowledge that is necessary for answering biological questions. Some microarray raw datasets have also been downloaded from the Gene Expression Omnibus and analyzed by the open-source software GeneArmada. The Semantic Web technologies, together with the background knowledge from the domain's ontologies, allows both rapid conversion and integration of this knowledge base. SPARQL endpoint http://sparql.kupkb.org/sparql The KUPKB Network Explorer will help you visualize the relationships among molecules stored in the KUPKB. A simple spreadsheet template is available for users to submit data to the KUPKB. It aims to capture a minimal amount of information about the experiment and the observations made. kidney, urinary, urine, pathway, molecule, visualizer, gene, protein, mirna, metabolite, mrna, microarray, ortholog, rdf, renal cell, anatomy, animal model, disease, sparql, proteomics, ontology, biomarker, gene expression, physiology, pathology is related to: NIDDK Information Network (dkNET)
is related to: Gene Expression Omnibus
is related to: Gene Ontology
is related to: KEGG
has parent organization: University of Manchester; Manchester; United Kingdom
has parent organization: National Institute of Health and Medical Research; Rennes; France
Kidney disease European Union ;
FP7 ;
ICT-2007.4.4 e-LICO project
PMID:21624162 THIS RESOURCE IS NO LONGER IN SERVICE. nlx_154134 http://www.e-lico.eu/kupkb SCR_001746 Kidney & Urinary Pathway Knowledge Base 2026-08-11 09:40:26 2
Assessment Serial Evaluation and Subsequent Sequelae in Acute Kidney Injury (ASSESS-AKI)
 
Resource Report
Resource Website
Assessment Serial Evaluation and Subsequent Sequelae in Acute Kidney Injury (ASSESS-AKI) (RRID:SCR_014386) ASSESS-AKI data or information resource, resource, data set A study which recruits patients with and without an episode of acute kidney injury during a hospitalization, and follows them longitudinally for major cardiac, renal and mortality events. An important aspect of the study is the prospective evaluation of potential biomarkers for renal and cardiac outcomes. study, acute kidney injury, longitudinal, major cardiac event, major renal event, major mortality event, biomarker is listed by: NIDDK Research Resources
is listed by: NIDDK Information Network (dkNET)
NIDDK Account required http://www.niddk.nih.gov/research-funding/research-resources/Pages/default.aspx SCR_014386 Assessment Serial Evaluation and Subsequent Sequelae in Acute Kidney Injury 2026-08-11 09:42:46 0
George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Animal Models Core
 
Resource Report
Resource Website
George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Animal Models Core (RRID:SCR_015292) service resource, core facility, access service resource, resource Core that generates and distributes several kidney-specific Cre recombinase and tetracycline-inducible activator and repressor lines to be crossed to floxed or tet responder lines provided by co-investigators. animal models, pathophysiology, mice analysis is listed by: NIDDK Information Network (dkNET)
has parent organization: University of Texas Southwestern Medical Center; Texas; USA
has parent organization: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center
is organization facet of: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center
NIDDK P30DK079328 Available to the research community, Fee for service SCR_015292 2026-08-11 09:43:00 0
Polycystic Kidney Disease Research Resource Consortium
 
Resource Report
Resource Website
1+ mentions
Polycystic Kidney Disease Research Resource Consortium (RRID:SCR_022033) PKD RRC portal, funding resource, data or information resource, consortium, organization portal Consortium develops and shares investigative resources, reagents and expertise with broader research community to accelerate innovation and discovery in field of polycystic kidney disease.Provides assistance with protocols and trouble shooting. Provides funding opportunities. NIDDK, polycystic kidney disease, innovation and discovery, protocols, trouble shooting, funding is related to: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases
is related to: NIDDK Information Network (dkNET)
is related to: Polycystic Kidney Disease Research and Translation Centers
polycystic kidney disease National Institute of Diabetes and Digestive and Kidney Diseases Free, Freely available SCR_022033 2026-08-11 09:44:16 7
Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center Mouse Models and Biobank
 
Resource Report
Resource Website
Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center Mouse Models and Biobank (RRID:SCR_015319) service resource, core facility, access service resource, resource Core facility which provides mouse models and a biobank of tissues and other materials for research. pkd, polycystic kidney disease, biobank, mouse model is listed by: NIDDK Information Network (dkNET)
has parent organization: University of Maryland School of Medicine; Maryland; USA
has parent organization: Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center
is organization facet of: Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center
Polycystic Kidney Disease NIDDK P30DK090868 Available to the research community SCR_015319 2026-08-11 09:43:00 0
Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Molecular Genetics and Biomarker Core
 
Resource Report
Resource Website
Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Molecular Genetics and Biomarker Core (RRID:SCR_015308) service resource, core facility, access service resource, resource Core services include mutation screening of cell lines derived from ADPKD patients, mutation screening of large, typical ADPKD populations, genetic screening of atypical PKD families, cystic Kidney and Liver Disease Biobank (CKLBB) from ADPKD patients, and urine collection and fractionation. molecular genetics, biomarker, mutation screening, PKD is listed by: NIDDK Information Network (dkNET)
has parent organization: Mayo Clinic Minnesota; Minnesota; USA
has parent organization: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester
is organization facet of: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester
Polycystic Kidney Disease NIDDK P30DK090728 Available to the research community SCR_015308 2026-08-11 09:43:08 0

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