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http://www.chemnavigator.com/

Database of commercially accessible screening compounds from international chemistry suppliers. iResearchLibrary is updated on a weeky basis and offers support for creating internal screening libraries containing commercially accessible compounds, developing exploratory and targeted libraries, selecting commercially accessible compounds for SAR, lead expansion, and hit follow-up projects, and using structures for pharmacophore searching, virtual screening and other computational work.

Proper citation: iResearch Library (RRID:SCR_014890) Copy   

•   Source: SciCrunch Registry
  

http://www.lsm.tugraz.at/pcsim/

Software tool for simulating heterogeneous networks composed of different model neurons and synapses. It is intended to simulate networks containing up to millions of neurons and on the order of billions of synapses by distributing the network over different nodes of a computing cluster by using MPI.

Proper citation: PCSIM (RRID:SCR_014770) Copy   

•   Source: SciCrunch Registry
  

http://thomsonreuters.com/products_services/science/science_products/a-z/world_drug_index/

Database of marketed and developed drugs indexed with internationally-recognized drug names, synonyms, trade names, trivial names and trial preparation codes in one source, plus compound structures and activity data. Each record has chemical structure and is classified by drug activity, mechanism of action, treatment, manufacturer, synonyms, medical nformation and literature references.

Proper citation: World Drug Index (RRID:SCR_014891) Copy   

•   Source: SciCrunch Registry
  

https://ecocyte-us.com/

Supplier and servicer of products for expression studies in Xenopus laevis oocytes. Products include overnight delivery of freshly prepared Xenopus laevis oocytes, Cell & Tissue Media necessary during preparation, maintenance, and recording of Xenopus oocytes and lab chemicals. Services for pharmacological studies include heterologous expression and in vitro electrophysiology.

Proper citation: EcoCyte Bioscience (RRID:SCR_014773) Copy   

•   Source: SciCrunch Registry
  

https://dogma.ccbb.utexas.edu/

Web-based annotation tool for plant chloroplasts and animal mitochondrial genomes. DOGMA allows the use of BLAST searches against a custom database, and conservation of basepairing in the secondary structure of animal mitochondrial tRNAs to identify and annotate genes.

Proper citation: DOGMA (RRID:SCR_015060) Copy   

•   Source: SciCrunch Registry
  

http://www.genezilla.org/

Reconfigurable eukaryotic gene finder based on the Generalized Hidden Markov Model framework. The run time and memory requirements are linear in the sequence length. Genezilla utilizes Interpolated Markov Models (IMMs), Maximal Dependence Decomposition (MDD), and includes states for signal peptides, branch points, TATA boxes, and CAP sites.

Proper citation: Genezilla (RRID:SCR_014657) Copy   

•   Source: SciCrunch Registry
  

https://pythonhosted.org/eelbrain/

Statistical analysis toolbox for MEG and EEG. There are three primary data-objects: Factor for categorical variables, Var for scalar variables, and NDVar for multidimensional data. Factor is a container for one-dimensional, categorial data – each case is described by a string label. Var is a container to associate one-dimensional numpy.ndarray objects with a name. NDVars offer numpy functionality that takes into account the dimensions. There is also a Dataset class which acts as a vessel for variable objects (Factor, Var and NDVar) describing the same cases.

Proper citation: Eelbrain (RRID:SCR_014661) Copy   

•   Source: SciCrunch Registry
  

https://github.com/marcel-goldschen-ohm/SingleMoleculeImageAnalysis

MATLAB software tool collection for data acquisition and image analysis from zero mode waveguides.

Proper citation: Zero Mode Waveguide Imaging and Analysis package tools (RRID:SCR_014660) Copy   

•   Source: SciCrunch Registry
  

https://www.ebi.ac.uk/metabolights/

A cross-species, cross-technique database for metabolomics experiments, data, and derived information. It includes metabolite structures and their reference spectra, their biological roles, locations and concentrations, and experimental data from metabolic experiments.

Proper citation: MetaboLights (RRID:SCR_014663) Copy   

•   Source: SciCrunch Registry
  

http://www.baderc.org

Consortium of laboratory-based and clinical investigators who research etiology, pathogenesis, treatment and cure of type 1 and type 2 diabetes, and their associated microvascular and atherosclerotic complications.

Proper citation: Boston Area Diabetes Endocrinology Research Center (RRID:SCR_015072) Copy   

•   Source: SciCrunch Registry
  

http://www.einstein.yu.edu/centers/diabetes-research/

Research center that facilitates the research of diabetes and related studies in obesity, metabolism and endocrinology

Proper citation: Einstein-Mount Sinai Diabetes Research Center (RRID:SCR_015070) Copy   

•   Source: SciCrunch Registry
  

http://bioinformatics.psb.ugent.be/orcae/

Online genome annotation tool for validating and correcting gene annotations. OrcAE is community-driven and can be edited by account-holders in the research community.

Proper citation: Online Resource for Community Annotation of Eukaryotes (RRID:SCR_014989) Copy   

•   Source: SciCrunch Registry
  

https://www.thermofisher.com/order/catalog/product/IQLAAEGAAPFADBMBCX

Mass spectrometer that combines quadrupole, ion trap, and Orbitrap mass analysis.

Proper citation: LTQ-Orbitrap Fusion Tribrid Mass Spectrometer (RRID:SCR_014992) Copy   

•   Source: SciCrunch Registry
  

https://www.medcalc.org/

Statistical software for ROC curve analysis. MedCalc performs several statistical tests such as method comparison, method evaluation, reference intervals, and meta-analysis.

Proper citation: MedCalc (RRID:SCR_015044) Copy   

•   Source: SciCrunch Registry
  

https://www.nikoninstruments.com/en_EU/Products/Upright-Microscopes/Research/Eclipse-FN1

Fixed-stage microscope for electrophysiological research. Features include open design, noise reduction, 16x objective lens, and water dipping objective with depth induced aberration correction.

Proper citation: Nikon: Eclipse FN1 Microscope (RRID:SCR_014995) Copy   

•   Source: SciCrunch Registry
  

https://addictionresource.com

Private organization that offers resources and serves as a community for those recovering from addiction and to help patients find the highest quality care for a successful recovery.

Proper citation: AddictionResources (RRID:SCR_015048) Copy   

•   Source: SciCrunch Registry
  

https://www.agilent.com/cs/library/datasheets/Public/5991-2541EN.pdf

Hardware system which automates RNA, DNA, and protein sample QC, including sample loading, separation, and imaging.

Proper citation: Agilent: 2200 TapeStation Instrument (RRID:SCR_014994) Copy   

•   Source: SciCrunch Registry
  

http://www.agilent.com/en-us/products/software-informatics/masshunter-suite/masshunter/masshunter-software

This resource is not available. Documented on October 6, 2020.Software for the analysis of mass spectrometry data. MassHunter also works with software-specific packages to do more specialized analysis tasks.

Proper citation: Agilent Masshunter Quantitative Analysis software (RRID:SCR_015040) Copy   

•   Source: SciCrunch Registry
  

https://hcimage.com/

Image acquisition and analysis software suite for Hamamatsu imaging devices. Hamamatsu Photonics imaging system for microscopy.

Proper citation: HCImage (RRID:SCR_015041) Copy   

•   Source: SciCrunch Registry
  

https://www.schrodinger.com/

Commercial ogranization which provides molecular and drug discovery software and services to researchers. American software company that develops chemical simulation software for use in pharmaceutical, biotechnology, and materials science research. Provides products ranging from general molecular modeling programs to a full suite of chemical simulation and drug design software, including ligand- and structure-based methods.

Proper citation: Schrodinger (RRID:SCR_014879) Copy   

•   Source: SciCrunch Registry