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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Authority Synonyms Record Last Update Mentions Count
Alveole Leonardo
 
Resource Report
Resource Website
1+ mentions
Alveole Leonardo (RRID:SCR_021940) software resource Photopatterning software to control PRIMO system including UV illumination module, microscope, camera and stage, and to precisely define experimental conditions.Used to design your own micropatterning manipulations. Alvéole, control PRIMO system, micropatterning manipulations design is related to: Alveole: PRIMO photopatterning module Restricted SCR_021940 SciCrunch Registry Alvéole Leonardo software, Leonardo software 2026-10-31 12:18:17 2
Alveole: PRIMO photopatterning module
 
Resource Report
Resource Website
1+ mentions
Alveole: PRIMO photopatterning module (RRID:SCR_021941) PRIMO instrument resource Photopatterning device for performing micropatterning, microfabrication and hydrogel polymerization.Part of PRIMO system. Alvéole, photopatterning module, micropatterning, microfabrication, hydrogel polymerization, instrument, equipment is related to: Alveole Leonardo Restricted https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_021941.pdf SCR_021941 SciCrunch Registry Alvéole PRIMO, Alveole PRIMO 2026-10-31 12:18:23 1
MeDuSa
 
Resource Report
Resource Website
50+ mentions
MeDuSa (RRID:SCR_022058) data access protocol, software resource, web service Web server of multi draft based scaffolder.Exploits information obtained from set of genomes from related organisms to determine correct order and orientation of contigs. Multi draft based scaffolder, genomes, related organisms, contigs, contigs correct order determination, contigs orientation determination PMID:25810435 Free, Freely available SCR_022058 SciCrunch Registry Multi-Draft based Scaffolder 2026-10-31 12:18:26 67
Narishige: PC 10 Puller
 
Resource Report
Resource Website
1+ mentions
Narishige: PC 10 Puller (RRID:SCR_022057) instrument resource Vertical pipette puller to create microelectrodes from borosilicate capillaries. Vertical pipette puller, microelectrodes, borosilicate capillaries, instrumente, equipment, USEDit Restricted SCR_022057 SciCrunch Registry Narishige PC-10 Puller 2026-10-31 12:18:20 5
Zeitz: DMZ Universal Electrode Puller
 
Resource Report
Resource Website
1+ mentions
Zeitz: DMZ Universal Electrode Puller (RRID:SCR_022056) instrument resource Horizontal pipette puller to pull and polish microelectrodes from borosilicate capillaries. Zeitz-Instrumente Vertriebs GmbH, electrode puller, horizontal pipette puller, pull and polish microelectrodes, borosilicate capillaries, instrument, equipment, USEDit is listed by: USEDit Restricted https://www.zeitz-puller.com/support/manual/ SCR_022056 SciCrunch Registry DMZ Zeitz Puller 2026-10-31 12:18:24 4
ProQ3
 
Resource Report
Resource Website
10+ mentions
ProQ3 (RRID:SCR_021880) data access protocol, software resource, web service Improved model quality assessments using Rosetta energy terms. Predictor combines training features from ProQRosCen, ProQRosFA and ProQ2. model quality assessments, model quality prediction Swedish eScience Research Center ;
Swedish Research Council
DOI:10.1038/srep33509 Free, Freely available SCR_021880 SciCrunch Registry Proq3 2026-10-31 12:18:18 11
Narishige: MF 830 Microgrinder
 
Resource Report
Resource Website
1+ mentions
Narishige: MF 830 Microgrinder (RRID:SCR_022055) instrument resource Powerful microscope mounted to produce microelectrodes for patch clamping. microscope, patch clamping, microelectrode, produce microelectrode, microforge, polish microelectrode tips, instrument, equipment, USEDit is listed by: USEDit Restricted SCR_022055 SciCrunch Registry Narishige MF-830 Microgrinder 2026-10-31 12:18:17 1
Colorado School of Mines; Golden; Colorado
 
Resource Report
Resource Website
1+ mentions
Colorado School of Mines; Golden; Colorado (RRID:SCR_022054) data or information resource, portal, topical portal Public research university in Golden, Colorado, founded in 1874. School offers both undergraduate and graduate degrees in engineering, science, and mathematics, with focus on energy and environment. is parent organization of: Colorado School of Mines Shared Instrumentation Facility X-ray Diffraction and Computed Tomography Core Facility
is parent organization of: Colorado School of Mines Shared Instrumentation Facility Liquid Chromotography Mass Spectrometry Core Facility
is parent organization of: Colorado School of Mines Shared Instrumentation Facility Mechanical Testing Core Facility
is parent organization of: Colorado School of Mines Shared Instrumentation Facility Rocky Mountain Environmental X-Ray Photoelectron Spectroscopy Core Facility
is parent organization of: Colorado School of Mines Shared Instrumentation Facility Time of Flight Secondary Ion Mass Spectrometry Core Facility
is parent organization of: Colorado School of Mines Shared Instrumentation Facility Electron and Scanning Probe Microscopy Core Facility
is parent organization of: Colorado School of Mines Shared Instrumentation Facility Surface Characterization and Thin Film Deposition Core Facility
SCR_022054 SciCrunch Registry 2026-10-31 12:18:26 1
ProSA web
 
Resource Report
Resource Website
100+ mentions
ProSA web (RRID:SCR_021879) data access protocol, software resource, web service Interactive web service for recognition of errors in three dimensional structures of proteins. structure errors recognition, proteins three dimensional structures, protein structure errors FWF Austria ;
University of Salzburg Austria
PMID:17517781 Free, Freely available SCR_021879 SciCrunch Registry ProSA-web 2026-10-31 12:18:22 474
GeoMapApp
 
Resource Report
Resource Website
50+ mentions
GeoMapApp (RRID:SCR_021919) software resource, web application Web tool as map based application for browsing, visualizing and analyzing diverse suite of curated global and regional geoscience data sets. These cover geophysics, geology, geochemistry, physical oceanography, climatology, and more. Runs with Java under Windows, Mac OS X, Linux and Unix/Solaris operating systems. Marine Geoscience Data System, Lamont-Doherty Earth Observatory, geoscience data sets, browsing curated geoscience data, visualizing curated geoscience data, analyzing curated geoscience data is related to: Marine Geoscience Data System
has parent organization: Columbia University; New York; USA
Free, Available for download, Freely available SCR_021919 SciCrunch Registry 2026-10-31 12:18:18 65
HOBOware Pro
 
Resource Report
Resource Website
1+ mentions
HOBOware Pro (RRID:SCR_021915) software resource Weather data logging software used for all HOBO data loggers and wireless data nodes. Used to read out and plot data, and export to spreadsheets for further analysis. Data logging software, HOBO data loggers, wireless data nodes, Onset, HOBO Restricted SCR_021915 SciCrunch Registry Data loger HOBO 2026-10-31 12:18:16 1
Resonance Technology: VisuaStimDigital
 
Resource Report
Resource Website
Resonance Technology: VisuaStimDigital (RRID:SCR_021892) instrument resource Audio visual stimulation system for functional MRI (fMRI) applications. Audio visual stimulation system, functional MRI, fMRI, Resonance Technology Inc. Restricted SCR_021892 SciCrunch Registry 2026-10-31 12:18:22 0
Izon Control Suite
 
Resource Report
Resource Website
1+ mentions
Izon Control Suite (RRID:SCR_021922) software resource Data acquisition software. Allows raw or filtered measurement data to be viewed in real time. Part of qNano system. Izon Control Suite Software V3.4 is maintenance software release that updates Izon current software. Izon Science Ltd, data acquisition, nanotechnology is related to: Izon: qNano Gold Free, Available for download, Freely available https://support.izon.com/how-can-i-get-the-latest-software-release SCR_021922 SciCrunch Registry qNano Control Suite Software, Izon Control Suite Software V3.4, Izon Control Suite Software, Izon qNano Control Suite Software 2026-10-31 12:18:22 3
University of Puerto Rico Caribbean Primate Research Center
 
Resource Report
Resource Website
50+ mentions
University of Puerto Rico Caribbean Primate Research Center (RRID:SCR_021920) CPRC biomaterial supply resource, material resource, organism supplier Facilitates supply of conventional and specific pathogen free nonhuman primates and biological samples. Priority is given to NIH-funded investigators in universities, NIH Intramural Program, and contractors working on behalf of researchers conducting experiments under NIH-funded programs. Non-NIH-funded investigators may still be considered depending on resource availability.To request for CPRC animals, authorized representative of institution will need to submit Animal Allocation Request form. CPRC Resource Distribution, rhesus macaques, nonhuman primates supply, biological samples supply, resource distribution, Conventional and Specific Pathogen Free nonhuman primates has parent organization: University of Puerto Rico; Puerto Rico; USA Restricted SCR_021920 SciCrunch Registry University of Puerto Rico Caribbean Primate Research Center Resource Distribution Core 2026-10-31 12:18:25 76
Bio-Rad: T100 Thermal Cycler
 
Resource Report
Resource Website
1+ mentions
Bio-Rad: T100 Thermal Cycler (RRID:SCR_021921) instrument resource Small compact 96well thermal cycler. PCR system features intuitive touch screen and thermal gradient technology to optimize reaction in single run. BioRad, 96well thermal cycler, thermal cycler, PCR system, RT PCR, touch screen, thermal gradient technology, instrument, equipment, USEDit https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_021921.pdf Model_Number_T100_Thermal_Cycler SCR_021921 SciCrunch Registry T100 Thermal Cycler 2026-10-31 12:18:17 7
MFDp2
 
Resource Report
Resource Website
1+ mentions
MFDp2 (RRID:SCR_021885) data access protocol, software resource, web service Web tool for accurate prediction of disorder in proteins by fusion of disorder probabilities, content and profiles. protein disorder, accurate prediction, disorder in proteins, disorder prediction, disorder probabilities Natural Sciences and Engineering Research Council of Canada ;
University of Alberta
PMID:28516009 Free, Freely available SCR_021885 SciCrunch Registry Multilayered Fusion based Disorder predictor v. 2.00 2026-10-31 12:18:18 4
PrDOS
 
Resource Report
Resource Website
10+ mentions
PrDOS (RRID:SCR_021886) data access protocol, software resource, web service Web server to predict natively disordered regions of protein chain from its amino acid sequence. Returns disorder probability of each residue as prediction results. predict natively disordered regions, protein chain, protein chain prediction, disordered regions, disorder probability SCR_021886 SciCrunch Registry 2026-10-31 12:18:25 39
3DRefine
 
Resource Report
Resource Website
10+ mentions
3DRefine (RRID:SCR_021883) data access protocol, software resource, web service Interactive web server for efficient protein structure refinement with capability to perform web based statistical and visual analysis. efficient protein structure refinement, statistical and visual analysis NIGMS R01 GM093123 DOI:10.1093/nar/gkw336 Free, Freely available SCR_021883 SciCrunch Registry 2026-10-31 12:18:22 32
JSpeciesWS
 
Resource Report
Resource Website
10+ mentions
JSpeciesWS (RRID:SCR_022059) data access protocol, software resource, web service Web server for prokaryotic species circumscription based on pairwise genome comparison. Service for in silico calculating extent of identity between two genomes, parameter routinely used in process of polyphasic microbial species circumscription. Service measures average nucleotide identity. prokaryotic species circumscription, pairwise genome comparison, average nucleotide identity measurement European Community Seventh Framework Programme PMID:26576653 Free, Freely available SCR_022059 SciCrunch Registry JSpecies Web Server 2026-10-31 12:18:18 33
HaploMaker
 
Resource Report
Resource Website
1+ mentions
HaploMaker (RRID:SCR_021928) software resource Software pipeline for haplotype assembly of diploid genomes using paired end or PacBio reads. haplotype assembly, diploid genomes, paired end reads, PacBio reads Free, Available for download, Freely available SCR_021928 SciCrunch Registry 2026-10-31 12:18:25 1

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