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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Authority Synonyms Record Last Update Mentions Count
LIBSVM
 
Resource Report
Resource Website
1000+ mentions
LIBSVM (RRID:SCR_010243) software application, software resource An integrated software for support vector classification, (C-SVC, nu-SVC), regression (epsilon-SVR, nu-SVR) and distribution estimation (one-class SVM) from the laboratory of Chih-Chung Chang and Chih-Jen Lin. It supports multi-class classification. software repository, vector classification, regression, distribution estimation is used by: Functional Real-time Interactive Endogenous Neuromodulation and Decoding (FRIEND)
has parent organization: National Taiwan University; Taipei; Taiwan
nlx_156876, nlx_157763, SCR_003614 SCR_010243 SciCrunch Registry LIBSVM -- A Library for Support Vector Machines, Library for Support Vector Machines 2026-10-31 12:20:34 1231
Robotic Flower System for Bee Behavior project
 
Resource Report
Resource Website
Robotic Flower System for Bee Behavior project (RRID:SCR_021584) data or information resource, instrument resource, portal, project portal Portal provides system of robotic artificial flowers to study bumble bee behavior. System is designed to capture data when animal is feeding by placement of IR beams that are broken when engaged on flowers feeding mechanism and sends data to control unit.Developed by University of Oulu in Finland scientists. System includes control unit, separate artificial flowers, and personal computer. Control unit is to handle electronics of flowers, collect data from them, and to send data to computer. Flowers contain infrared sensor, their associated electronics, and electromechanical device that offers small, precise amount of sugar solution from reservoir. Computer runs software that controls refilling rate and data collection via the control unit. Circuit diagrams, parts list, and control software and source code are available in paper supplemental information. Robotic artificial flowers, study bumble bee behavior, animal feeding data, flowers feeding mechanism, OpenBehavior, Instrument is listed by: OpenBehavior DOI:10.1002/ece3.2062 Free, Freely available SCR_021584 SciCrunch Registry Robotic Flower System for Bee Behavior 2026-10-31 12:18:13 0
Homecage Task Training and Mesoscale Imaging project
 
Resource Report
Resource Website
Homecage Task Training and Mesoscale Imaging project (RRID:SCR_021580) data or information resource, instrument resource, portal, project portal Project to build and use new generation of home cages with emphasis on training for simple headfixed tasks during simultaneous autonomous acquisition of mesoscale brain imaging data. Homecage platform for automated task training and mesoscale brain imaging for mice developed by University of British Columbia scientists. Instrument, automated task training, mesoscale brain imaging, mice, OpenBehavior is listed by: OpenBehavior
is related to: AutoHeadFix
has parent organization: University of British Columbia; British Columbia; Canada
DOI:10.7554/elife.55964 Free, Freely available SCR_021580 SciCrunch Registry Homecage Task Training and Mesoscale Imaging 2026-10-31 12:18:16 0
OpenMV project
 
Resource Report
Resource Website
OpenMV project (RRID:SCR_021579) data or information resource, instrument resource, portal, project portal Portal provides system capable of frame differencing, color tracking, marker tracking, face detection, eye tracking, person detection (with TensorFlow Lite), and more. Supports very easy to use GUI, the OpenMV IDE. Instrument, frame differencing, color tracking, marker tracking, face detection, eye tracking, person detection, OpenBehavior is listed by: OpenBehavior
is related to: OpenMV
Free, Freely available SCR_021579 SciCrunch Registry OpenMV system 2026-10-31 12:18:13 0
Tetroplater
 
Resource Report
Resource Website
Tetroplater (RRID:SCR_021578) data or information resource, instrument resource, portal, project portal Portal provides open source circuit for microwire tetrode gold plating. Circuit includes impedance meter and current generator for tetrode gold plating. Developed by University of Toyama scientist. Instrument, neuronal activity, recording neuronal activity, microwire tetrode gold plating, OpenBehavior is listed by: OpenBehavior DOI:10.3791/1098 Free, Freely available SCR_021578 SciCrunch Registry 2026-10-31 12:18:21 0
Pulse Pal
 
Resource Report
Resource Website
Pulse Pal (RRID:SCR_021611) software resource Software tool as part of Pulse Pal system which allows users to create and trigger software defined trains of voltage pulses with high temporal precision. voltage pulses, pulse train generator, OpenBehavior is listed by: OpenBehavior
is related to: Pulse Pal project
Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/pulse-pal/ SCR_021611 SciCrunch Registry 2026-10-31 12:18:14 0
OpenSpritzer
 
Resource Report
Resource Website
OpenSpritzer (RRID:SCR_021575) data or information resource, instrument resource, portal, project portal Portal provides open hardware used in labs for administering picoliters of liquid to biological samples. Pressure ejection system developed by University of Sussex scientist for reliably delivering picolitre volumes. Instrument, administering picoliters of liquid, pressure ejection system, delivering picolitre volumes, OpenBehavior is listed by: OpenBehavior
has parent organization: University of Sussex; Brighton; United Kingdom
DOI:10.1038/s41598-017-02301-2 Free, Freely available SCR_021575 SciCrunch Registry 2026-10-31 12:18:13 0
Pulse Pal project
 
Resource Report
Resource Website
Pulse Pal project (RRID:SCR_021576) data or information resource, instrument resource, portal, project portal Portal provides open source, low cost, programmable pulse train generator for physiology and behavior. Device allows users to create and trigger software defined trains of voltage pulses with high temporal precision. Arduino powered device that generates precise sequences of voltage pulses for neural stimulation and stimulus control. Controlled either through its APIs in MATLAB, Python and C plus plus, or as stand-alone instrument using its oLED screen and clickable thumb joystick. Instrument, pulse train generator, Arduino powered device, neural stimulation, stimulus control, OpenBehavior is listed by: OpenBehavior
is related to: Pulse Pal
Free, Freely available SCR_021576 SciCrunch Registry Pulse Pal system, Pulse Pal generator 2026-10-31 12:18:16 0
MouseMove
 
Resource Report
Resource Website
MouseMove (RRID:SCR_021618) data analysis software, data processing software, software application, software resource Open source program for semi automated analysis of movement and cognitive testing in rodents. Accurately quantifies numerous parameters of movement including travel distance, speed, turning, stationary fraction and laterality. Part of MouseMove system. Semi automated analysis, movement analysis, movement parameters quantification, OpenBehavior is listed by: OpenBehavior
is related to: MouseMove project
DOI:10.1038/srep16171 Free, Available for download, Freely Available https://edspace.american.edu/openbehavior/project/mousemove/ SCR_021618 SciCrunch Registry 2026-10-31 12:18:22 0
TRIO Platform
 
Resource Report
Resource Website
TRIO Platform (RRID:SCR_021596) data or information resource, instrument resource, portal, project portal Portal provides low profile in vivo imaging support and restraint system for mice. System is compact and provides sturdy head fixation, gas anesthesia mask, and warm water bed. Compact design allows to work with variety of microscope stages and use of 3D printed components makes this design customizable. Instrument, mice neural function, imaging support, restraint system, fixation, gas anesthesia mask, warm water bed, OpenBehavior is listed by: OpenBehavior DOI:10.3389/fnins.2016.00169 Free, Freely available SCR_021596 SciCrunch Registry Three-In-One Platform 2026-10-31 12:18:16 0
Visual Discrimination with an iPad
 
Resource Report
Resource Website
Visual Discrimination with an iPad (RRID:SCR_021593) data or information resource, instrument resource, portal, project portal Portal provides touchscreen platform developed by Texas Christian University scientists. iPad apparatus set up consists of four wall operant chamber, remote desktop program, Visual Basic 6 software, and single wireless iPad. Wireless iPad allows for flexibility in setups during performing visual discrimination behavioral experiments. Instrument, iPad apparatus, four wall operant chamber, remote desktop program, Visual Basic 6 software, wireless iPad, visual discrimination tasks, OpenBehavior is listed by: OpenBehavior
has parent organization: Texas Christian University; Fort Worth; USA
DOI:10.1016/j.beproc.2012.11.013 Free, Freely available http://www.drkennethleising.com/research/tbes/ SCR_021593 SciCrunch Registry 2026-10-31 12:18:12 0
StimDuino
 
Resource Report
Resource Website
StimDuino (RRID:SCR_021594) data or information resource, instrument resource, portal, project portal Portal provides Arduino controlled stimulus isolator that allows for highly accurate, reproducible automated setting of stimulation currents. Automatic stimulation patterns are software controlled and parameters are set from Matlab coded simple, intuitive and user friendly graphical user interface. Instrument, Arduino controlled stimulus isolator, reproducible automated setting, stimulation currents, OpenBehavior DOI:10.1016/j.jneumeth.2015.01.016 Free, Freely available SCR_021594 SciCrunch Registry 2026-10-31 12:18:21 0
SpikeGadgets
 
Resource Report
Resource Website
1+ mentions
SpikeGadgets (RRID:SCR_021623) commercial organization Company to design and sell powerful neuroscience hardware that interfaces with open source software platform supported by large community of scientists and developers. Support efforts of open source community in commercially sustainable way. Open Behavior is listed by: OpenBehavior SCR_021623 SciCrunch Registry SpikeGadgets 2026-10-31 12:18:22 1
Michigan Technological University; Houghton; USA
 
Resource Report
Resource Website
Michigan Technological University; Houghton; USA (RRID:SCR_021621) data or information resource, portal, topical portal Public research university founded in 1885. is parent organization of: Pearce Lab Syringe Pump project
is parent organization of: Michigan Technological University Materials Characterization and Fabrication Core Facility
SCR_021621 SciCrunch Registry 2026-10-31 12:18:17 0
CHEndoscope
 
Resource Report
Resource Website
1+ mentions
CHEndoscope (RRID:SCR_021587) data or information resource, instrument resource, portal, project portal Portal provides open source Compact Head Mounted Endoscope for imaging in freely behaving mouse. Includes accessible and flexible set of calcium imaging tools for neuroscience research community. Instrument, compact head mounted endoscope, imaging in awake behaving mouse, OpenBehavior. is listed by: OpenBehavior
is related to: chendoscope
DOI:10.1002/cpns.51 Free, Freely available SCR_021587 SciCrunch Registry Compact Head Mounted Endoscope 2026-10-31 12:18:12 2
Kent Scientific: SomnoFlow Low Flow Electronic Vaporizer
 
Resource Report
Resource Website
1+ mentions
Kent Scientific: SomnoFlow Low Flow Electronic Vaporizer (RRID:SCR_021629) instrument resource Compact, standalone vaporizer that uses either ambient air with internal air pump or compressed gas. It delivers only anesthetic required by animal according to its weight with flows down to 0.05 LPM. Low flow isoflurane anesthesia machine. Kent Scientific, SomnoFlow, electronic vaporizer, vaporizer, instrument, equipment, USEDit is listed by: USEDit SCR_021629 SciCrunch Registry SomnoFlow Electronic Vaporizer, Kent Scientific SomnoFlow Electronic Vaporizer 2026-10-31 12:18:22 3
CNVpytor
 
Resource Report
Resource Website
10+ mentions
CNVpytor (RRID:SCR_021627) data analysis software, data processing software, sequence analysis software, software application, software resource Software Python package and command line tool for CNV/CNA analysis from depth of coverage by mapped reads. Software tool for CNV/CNA detection and analysis from read depth and allele imbalance in whole genome sequencing. Copy number variations, copy number alternations, whole genome sequencing, Python has parent organization: Mayo Clinic NCI U24 CA220242 DOI:10.1101/2021.01.27.428472 Free, Available for download, Freely available SCR_021627 SciCrunch Registry 2026-10-31 12:18:17 24
Autonomous Training of a Forelimb Motor Task project
 
Resource Report
Resource Website
Autonomous Training of a Forelimb Motor Task project (RRID:SCR_021562) data or information resource, instrument resource, portal, project portal Portal related to individualized tracking of self directed motor learning in group housed mice performing skilled lever positioning task in home cage. Provides system for fully autonomous training of group housed mice on forelimb motor task. Task is run and controlled by Raspberry Pi microcomputer, which allows for cages to be monitored remotely through active internet connection. System was developed by University of Ottawa scientists. Instrument, individualized tracking, self directed motor learning, group housed mice, skilled lever positioning task, home cage, forelimb motor task, OpenBehavior is listed by: OpenBehavior
is related to: Autonomous Training of a Forelimb Motor Task
has parent organization: University of Ottawa; Ontario; Canada
DOI:10.1152/jn.00115.2017 Free, Freely available SCR_021562 SciCrunch Registry Autonomous Training of a Forelimb Motor Task 2026-10-31 12:18:13 0
FlyPi
 
Resource Report
Resource Website
FlyPi (RRID:SCR_021563) data or information resource, instrument resource, portal, project portal Portal provides open source and affordable microscope experimental setup device based on Raspberry Pi, Arduino microcontroller and off-the-shelf electronic components. System design is based on 3D-printed mainframe, Raspberry Pi computer, and high definition camera system as well as Arduino based optical and thermal control circuits. All functions of FlyPi can be controlled through custom written graphical user interface. Instrument, microscope experimental system, Raspberry Pi, Arduino microcontroller, high definition camera system, Arduino, optical control circuits, thermal control circuits, OpenBehavior is listed by: OpenBehavior DOI:10.1371/journal.pbio.2002702 Free, Freely available SCR_021563 SciCrunch Registry 2026-10-31 12:18:15 0
Teensy-Based Interface project
 
Resource Report
Resource Website
Teensy-Based Interface project (RRID:SCR_021560) data or information resource, instrument resource, portal, project portal Portal provides Teensy-Based Interface system. System includes Teensy 3.2 microcontroller based interface that is easily programmable, and offers high speed, precisely timed behavioral data acquisition and digital and analog outputs for controlling sCMOS cameras and other devices. Developed by Boston University scientists. Instrument, Teensy microcontrollers, Teensy interface, sCMOS camera, camera control, behavioral experiments, OpenBehavior is listed by: OpenBehavior
is related to: Teensy-Based Interface
has parent organization: Boston University; Massachusetts; USA
DOI:10.1016/j.jneumeth.2019.03.019 Free, Freely available SCR_021560 SciCrunch Registry Teensy-Based Interface 2026-10-31 12:18:11 0

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