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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
http://www.universityofcalifornia.edu/
Public research university system in the U.S. state of California with campuses at Berkeley, Davis, Irvine, Los Angeles, Merced, Riverside, San Diego, San Francisco, Santa Barbara, and Santa Cruz, along with numerous research centers and academic abroad centers.
Proper citation: University of California; California; USA (RRID:SCR_011617) Copy
United States Army's medical materiel developer, with responsibility for medical research, development, and acquisition and medical logistics management.
Proper citation: U.S. Army Medical Research and Materiel Command (RRID:SCR_011586) Copy
Consumer product safety commission charged with protecting the public from unreasonable risks of injury or death associated with the use of the thousands of types of consumer products under the agency''s jurisdiction - such as toys, cribs, power tools, cigarette lighters, and household chemicals. CPSC is committed to protecting consumers and families from products that pose a fire, electrical, chemical, or mechanical hazard.
Proper citation: U.S. Consumer Product Safety Commission (RRID:SCR_011588) Copy
The University of California, San Diego, also known as UC San Diego, is public research university located in the La Jolla neighborhood of San Diego, California, in the United States. Established in 1960, UCSD has 6 different campuses.
Proper citation: University of California at San Diego; California; USA (RRID:SCR_011625) Copy
http://www.snf.ch/en/Pages/default.aspx
The Swiss National Science Foundation (SNSF) is Switzerland''s leading provider of scientific research funding. The SNSF annually supports some 7200 researchers, almost 80 percent of whom are aged 35 years or younger. With its federal mandate, it supports basic research in all disciplines, from philosophy and biology to the nanosciences and medicine. It also invests in applied research in various scientific fields. The focus of its activities is the scientific endorsement of projects submitted by researchers. The best applicants are funded by the SNSF with an annual total amount equalling approximately CHF 700 million. Established in 1952 as a foundation under private law, the SNSF has the autonomy it needs to promote independent scientific research. The SNSF is committed to promoting young scientists and works to ensure that scientific research in Switzerland has the most favourable conditions for developing internationally. It also encourages dialogue between scientists and representatives in society, politics and the economy.
Proper citation: Swiss National Science Foundation (RRID:SCR_011554) Copy
http://www.temple.edu/pharmacy/
The graduate program inPharmaceutical Sciences at Temple University offers thesis and non-thesis degrees that cover the areas of concentration/study in: Medicinal Chemistry Pharmaceutics Pharmacodynamics After completion, graduates with expertise in the Pharmaceutical Sciences have a multitude of career opportunities and will be able to compete for prestigious post-doctoral positions in academia, the pharmaceutical industry and government agencies. They can also obtain positions as Research Scientists in the pharmaceutical and biotechnology industries or government agencies and academic positions in Schools of Pharmacy, Universities in Departments of Pharmacology, Neuroscience, Engineering, Biology, Chemistry, Neuroscience, or Psychology.
Proper citation: Temple University School of Pharmacy (RRID:SCR_011564) Copy
Federal agency.
Proper citation: U.S. Department of Veterans Affairs (RRID:SCR_011566) Copy
Launched in October 2007, TFRI is the brainchild of the Terry Fox Foundation. TFRI involves collaboration between cancer hospitals and research organizations across Canada, and will occur initially in British Columbia, Alberta, Ontario and Quebec. TFRI will support translational cancer research projects with the potential to significantly improve the health of cancer patients. TFRI is organized into functionally integrated yet geographically dispersed nodes. Regional cancer hospitals and research organizations participate in each node by providing space for researchers and by arranging for the participation of cancer patients in research projects. At each node, two node co-ordinators provide leadership, and bring together local scientific and clinical research teams to propose and manage specific projects. The TFRI headquarters team liaises with the TFRI nodes and provides direction, co-ordination and facilitates communication across the entire organization. The Terry Fox Foundation has committed a minimum of $50 million (CAN) over five years from donations obtained during the 25th anniversary of the Terry Fox Marathon of Hope and from new funds anticipated and those raised since 2005. Other partners sharing the same vision are being sought who will be asked to commit additional resources to support the ongoing work of the TFRI.
Proper citation: Terry Fox Research Institute (RRID:SCR_011568) Copy
An independent biomedical research institution specializing in genetics and in virology and immunology. Texas Biomed is funded by government and corporate grants and contracts, and donations from the public. (Wikipedia)
Proper citation: Texas Biomedical Research Institute; Texas; USA (RRID:SCR_011569) Copy
University hospital in Erlangen, Germany.
Proper citation: University Hospital Erlangen; Bavaria; Germany (RRID:SCR_011604) Copy
Public research university in Kingsville, Texas. It is part of the Texas A&M University System. The university has programs in engineering, agriculture, wildlife, music, and the sciences. It also developed the nation's first doctoral degree in bilingual education.
Proper citation: Texas A and M University-Kingsville; Texas; USA (RRID:SCR_011571) Copy
http://www.usc.edu/schools/pharmacy/graduate/
The USC School of Pharmacy is home to four nationally recognized graduate programs. Within the Department of Pharmacology and Pharmaceutical Sciences, degrees are offered in Molecular Pharmacology and Toxicology, as well as Pharmaceutical Sciences. Within the Titus Family Department of Clinical Pharmacy and Pharmaceutical Economics & Policy, degrees are offered in Pharmaceutical Economics and Policy, as well as Regulatory Science. The School offers a multidisciplinary educational experience that prepares students for successful careers in academia, the pharmaceutical industry, managed care organizations, and state and federal government.
Proper citation: University of Southern California School of Pharmacy Graduate Programs (RRID:SCR_011695) Copy
http://www.youtube.com/user/SacklerColloquia#g/u
This is the Sackler Colloquia YouTube channel. The Arthur M. Sackler Colloquia of the National Academy of Sciences address scientific topics of broad and current interest, cutting across the boundaries of traditional disciplines. Each year, several colloquia are scheduled, typically two days in length and international in scope. Each colloquium is organized by a member of the Academy, often with the assistance of an organizing committee, and feature presentations by leading scientists in the field and discussions with a hundred or more researchers with an interest in the topic. These colloquia are made possible by a generous gift from Jill Sackler, in memory of her husband, Arthur M. Sackler.
Proper citation: Sackler Colloquia's YouTube Channel (RRID:SCR_005126) Copy
http://scienceblogs.com/channel/brain-and-behavior/
ScienceBlogs posts about Brain & Behavior.
Proper citation: ScienceBlogs: Brain and Behavior (RRID:SCR_005159) Copy
StellaBase is a genomics database of Nematostella vectensis. It allows users to query the assembled Nematostella genome, a confirmed gene library, and a predicted genome using both keyword and homology based search functions. Data provided by these searches will elucidate gene family evolution in early animals. Unique research tools, including a Nematostella genetic stock library, a primer library, a literature repository and a gene expression library will provide support to the burgeoning Nematostella research community. Supported by: National Science Foundation (Grant No. 0212773 to JRF)
Proper citation: StellaBase: Nematostella vactensis genomics database (RRID:SCR_005153) Copy
http://www.ebi.ac.uk/biosamples/
Database that aggregates sample information for reference samples (e.g. Coriell Cell lines) and samples for which data exist in one of the EBI''''s assay databases such as ArrayExpress, the European Nucleotide Archive or PRoteomics Identificates DatabasE. It provides links to assays for specific samples, and accepts direct submissions of sample information. The goals of the BioSample Database include: # recording and linking of sample information consistently within EBI databases such as ENA, ArrayExpress and PRIDE; # minimizing data entry efforts for EBI database submitters by enabling submitting sample descriptions once and referencing them later in data submissions to assay databases and # supporting cross database queries by sample characteristics. The database includes a growing set of reference samples, such as cell lines, which are repeatedly used in experiments and can be easily referenced from any database by their accession numbers. Accession numbers for the reference samples will be exchanged with a similar database at NCBI. The samples in the database can be queried by their attributes, such as sample types, disease names or sample providers. A simple tab-delimited format facilitates submissions of sample information to the database, initially via email to biosamples (at) ebi.ac.uk. Current data sources: * European Nucleotide Archive (424,811 samples) * PRIDE (17,001 samples) * ArrayExpress (1,187,884 samples) * ENCODE cell lines (119 samples) * CORIELL cell lines (27,002 samples) * Thousand Genome (2,628 samples) * HapMap (1,417 samples) * IMSR (248,660 samples)
Proper citation: BioSample Database at EBI (RRID:SCR_004856) Copy
http://www.ncbi.nlm.nih.gov/biosample
Database containing descriptions of biological source materials used in experimental assays. Sources include: GenBank, Sequence Read Archive (SRA), Coriell, ATCC. Submissions are supported by a web-based Submission Portal that guides users through a series of forms for input of rich metadata describing their samples. As the capacity and complexity of biological data sets expands, databases face new challenges in ensuring that the information is adequately organized and described. The NCBI BioSample database is being developed to help address the challenges by providing the means by which data generators can organize and describe a broad range of sample types, and link to corresponding sets of experimental data in archival databases.
Proper citation: NCBI BioSample (RRID:SCR_004854) Copy
http://rnp.uthscsa.edu/rnp/SRPDB/SRPDB.html
It provides aligned, annotated and phylogenetically ordered sequences related to structure and function of SRP. SRPDB assists the study of structure and function of signal recognition particles (SRP), and provides annotated SRP, RNA, and SRP protein sequences phylogenetically ordered and aligned. Included are representative RNA secondary structure diagrams where each base pair is proven by comparative sequence analysis, information about other proteins that play a role in SRP-mediated protein translocation, as well as structural information about components of SRP. Where possible, links to primary sources were established.
Proper citation: SRPDB (RRID:SCR_005142) Copy
http://www.ncbi.nlm.nih.gov/Structure/ibis/ibis.cgi
A web server and database that organizes, analyzes and predicts interactions between proteins and other biomolecules. For a given protein sequence or structure query, it reports protein-protein, protein-small molecule, protein nucleic acids and protein-ion interactions observed in experimentally-determined structural biological assemblies. It also infers/predicts interacting partners and binding sites by homology, by inspecting the protein complexes formed by close homologs of a given query. To ensure biological relevance of inferred binding sites, the IBIS algorithm clusters binding sites formed by homologs based on binding site sequence and structure conservation.
Proper citation: IBIS: Inferred Biomolecular Interactions Server (RRID:SCR_004886) Copy
https://sites.google.com/site/jpopgen/dbNSFP
A database for functional prediction and annotation of all potential non-synonymous single-nucleotide variants (nsSNVs) in the human genome. Version 2.0 is based on the Gencode release 9 / Ensembl version 64 and includes a total of 87,347,043 nsSNVs and 2,270,742 essential splice site SNVs. It compiles prediction scores from six prediction algorithms (SIFT, Polyphen2, LRT, MutationTaster, MutationAssessor and FATHMM), three conservation scores (PhyloP, GERP++ and SiPhy) and other related information including allele frequencies observed in the 1000 Genomes Project phase 1 data and the NHLBI Exome Sequencing Project, various gene IDs from different databases, functional descriptions of genes, gene expression and gene interaction information, etc. Some dbNSFP contents (may not be up-to-date though) can also be accessed through variant tools, ANNOVAR, KGGSeq, UCSC Genome Browser''s Variant Annotation Integrator, Ensembl Variant Effect Predictor and HGMD.
Proper citation: dbNSFP (RRID:SCR_005178) Copy
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