Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Brandeis University Neuroscience Undergraduate Program Resource Report Resource Website |
Brandeis University Neuroscience Undergraduate Program (RRID:SCR_007166) | training resource, degree granting program, portal, data or information resource, organization portal, department portal, undergraduate program resource | Students entering Neuroscience Program at Brandeis have opportunities to work in range of fields, from cognitive neuroscience to structure and function of ion channels. Undergraduate concentration in neuroscience is designed to provide interdisciplinary program of study of neural mechanisms involved in control of human or animal behavior. Program is especially appropriate for students wishing to pursue further study in medicine, experimental psychology, or neuroscience. | has parent organization: Brandeis University; Massachusetts; USA | nif-0000-38224 | SCR_007166 | Undergraduate Neuroscience at Brandeis | 2026-08-20 09:27:30 | 0 | ||||||||||
|
LONI Image and Data Archive Resource Report Resource Website 100+ mentions |
LONI Image and Data Archive (RRID:SCR_007283) | IDA, LONI IDA, | image collection, database, data or information resource | Archive used for archiving, searching, sharing, tracking and disseminating neuroimaging and related clinical data. IDA is utilized for dozens of neuroimaging research projects across North America and Europe and accommodates MRI, PET, MRA, DTI and other imaging modalities. | data storage, mri, pet, mra, dti, neuroimaging, image storage, histology, fmri, spect, normal, control, alzheimer's disease, mild cognitive impairment, data sharing, clinical, protection, brain, cryosection, FASEB list |
is recommended by: National Library of Medicine is listed by: NIH Data Sharing Repositories |
Control, Autism, Parkinson's disease, Alzheimer's disease, Mild Cognitive Impairment, Normal control, Aging | NIBIB | Restricted | nif-0000-00040, r3d100012840 | https://ida.loni.usc.edu/login.jsp?search=true, https://doi.org/10.17616/R39N6D | https://ida.loni.ucla.edu/login.jsp | SCR_007283 | , IDA, LONI Database, LONI, Image Data Archive | 2026-08-20 09:27:33 | 113 | |||
|
NINDS/UCLA Repository for Parkinson's Disease Mouse Models Resource Report Resource Website |
NINDS/UCLA Repository for Parkinson's Disease Mouse Models (RRID:SCR_007319) | PDmice | organism supplier, material resource, biomaterial supply resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented on April 26, 2011. Information for depositors Investigators who are willing to share mice with the PD research community through this resource should send an email to PDMice_at_ninds.nih.gov describing the mouse. The submission will be reviewed by the PD Models Repository Oversight Committee and, if accepted, a copy of the MTA will be sent by return email. NINDS is most interested in distributing mice that have been characterized in a peer-reviewed publication, but other models will certainly be considered. The email should describe the following: The protocol for identification from tail DNA. The health report of the mice to be shipped (the report has to be less than 2 months old). Information about the strain and any special needs for care and breeding. Information about any publications involving the mice Certification that mice are not encumbered by continuing intellectual property or other rights to any research, data or discovery utilizing the animals. Information for consumers Investigators desiring to study the mice available through the repository should send a request via email to PDMice_at_ninds.nih.gov. Requests will be reviewed by the PD Models Repository Oversight Committee and priority will be determined on a first come, first served basis; two breeding pairs will typically be shipped to any single requester. As detailed in the MTA, mice are not available for commercial research, including but not limited to drug screening. Neither the creator nor UCLA have a role in the governance of the Repository, and specifically, cannot impose conditions upon availability or distribution. It is anticipated that until the Repository is in a mode of steady state production, requests will be collected and mice distributed as supply allows. The email requesting mice should include: A brief description of the protocol Either a copy of the IACUC approval letter or numberNINDS/UCLA Repository for Parkinson's Disease Mouse Models: One of the most immediate and important benefits of discoveries regarding the genetic or environmental causes of Parkinson's disease (PD) is the subsequent development of animal models wherein therapeutic and/or preventative interventions may be studied. The widespread availability of such models is critically important to making progress against a disorder that affects more than 500,000 Americans at any given time. The National Institute of Neurological Disorders and Stroke (NINDS) fully recognizes the burden placed on investigators by the financial and logistical realities of distributing high demand research resources. Some investigators have deposited their mice with national distribution facilities but many mouse models are not available through such resources. Developing means to facilitate greater sharing of mouse models of PD is one of the goals developed by the PD research community at the July 2002 summit meeting convened by the NIH Director. Accordingly, as part of the effort to accelerate PD research, NINDS and the University of California at Los Angeles (UCLA) created a resource that will distribute transgenic mouse models of human PD that are not yet available through national commercial resources. Investigators who are willing to share mice with the PD research community can simply arrange with NINDS to have the mice deposited at UCLA and investigators desiring to study the mice may arrange with NINDS to obtain two breeding pairs. The process will use Material Transfer Agreements created specifically for this arrangement. | fbv x 129/sv, fvb/n, 129s4 mix, 129s6/svev, -/-a53t/pac tg alpha, alpha synuclein knockout, bl6, dj-1 knockout, mt human alpha synuclein (a53t), parkin 129s4, synuclein, mouse model |
is listed by: One Mind Biospecimen Bank Listing has parent organization: University of California at Los Angeles; California; USA |
Parkinson's disease | NINDS | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-00187 | SCR_007319 | 2026-08-20 09:27:20 | 0 | ||||||
|
Clinical Randomisation of an Antifibrinolytic in Significant Haemorrhage Resource Report Resource Website 1+ mentions |
Clinical Randomisation of an Antifibrinolytic in Significant Haemorrhage (RRID:SCR_007235) | experimental protocol, topical portal, portal, narrative resource, data or information resource | This is a trial for a large randomised placebo controlled trial among trauma patients with, or at risk of, significant haemorrhage, of the effects of antifibrinolytic treatment on death and transfusion requirement. Sponsors: This resource is supported by UK NIHR Health Technology Assessment programme, Pfizer, BUPA Foundation, and J P Moulton Charitable Foundation. Keyowrds: Trial, Placebo, Drug, Trauma, Haemorrhage, Antifibrinolytic, Treatment, Death, Transfusion, | nif-0000-30275 | SCR_007235 | Crash-2 | 2026-08-20 09:27:32 | 7 | |||||||||||
|
Autoaligner Resource Report Resource Website 10+ mentions |
Autoaligner (RRID:SCR_007355) | software application, data processing software, software resource, data analysis software | Microtomy is a standard technique used for 2D microscopy, but it can also provide the foundation for 3D analysis using AutoAligner. AutoAligner reads a stack of serial sections and automatically aligns the single images, building up a 3D space that can be explored using Imaris. Each image is aligned in translation and rotation relative to its precursor image in the sequence. In addition to a fully automated mode, AutoAligner also provides manual control for neighboring images that are too different from each other for automatic alignment. The visual alignment tool uses fast display techniques for aligning images in real time. | nif-0000-00266 | SCR_007355 | 2026-08-20 09:27:36 | 25 | ||||||||||||
|
Activ 2000 Resource Report Resource Website 1+ mentions |
Activ 2000 (RRID:SCR_007352) | software application, data processing software, software resource, data analysis software | Data analysis software with the following main features: fMRI spatial and temporal pre-processing (gaussian filtering) with motion correction, time slicing and template co-registration ; fMRI multithreaded bloc processing with one or more conditions (up to 999), lateralization index, paradigm design (box-car style with HRF convolution), anatomic coregistration, multiplanar reconstructions, opengl 3D surfacic rendering. DPTools and Activ 2000 are now one single software: DPTools v 3.0 and above. All the features already included in DPTools are available for the fMRI processings (statistics, motion correction, time slicing, aso). DPTools 3.0 can read Siemens Mosaic and Philips REC/PAR files for diffusion / dynamic series, and can export files to SPM99 format. Features: * Images Conversion * Paradigm Creation * Images Pre-Processing * Images Processing * Statistics * Co-registration * 3D * Filming * Loading / Saving * Batch Script * PACS Integration * and more... Activ 2000 is freely downloadable (46 MB) | nif-0000-00258 | SCR_007352 | DPTools | 2026-08-20 09:27:36 | 3 | |||||||||||
|
neuroConstruct Resource Report Resource Website 10+ mentions |
neuroConstruct (RRID:SCR_007197) | neuroConstruct | software application, simulation software, software resource | Software for simulating complex networks of biologically realistic neurons, i.e. models incorporating dendritic morphologies and realistic cell membrane conductance, implemented in Java and generates script files for the NEURON and GENESIS simulators, with support for other simulation platforms (including PSICS and PyNN) in development. neuroConstruct is being developed in the Silver Lab in the Department of Neuroscience, Physiology and Pharmacology at UCL and uses the latest NeuroML specifications, including MorphML, ChannelML and NetworkML. Some of the key features of neuroConstruct are: Creation of networks of biologically realistic neurons, positioned in 3D space. Complex connectivity patterns between cell groups can be specified for the networks. Can import morphology files in GENESIS, NEURON, Neurolucida, SWC and MorphML format for inclusion in network models. Simulations can be run on the NEURON or GENESIS platforms. Cellular processes (synapses/channel mechanisms) can be imported from native script files or created in ChannelML. Recording of simulation data generated by the simulation and visualization/analysis of data. Stored simulation runs can be viewed and managed through the Simulation Browser interface. | cell, cellular, channel, conductance, data, dendrite, java, mechanism, membrane, model, morphology, network, neuron, neuronal network, pharmacology, physiology, simulation, software, synapse, visualization |
is listed by: 3DVC is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: NEURON is related to: Open Source Brain is related to: NeuroML has parent organization: University College London; London; United Kingdom |
Wellcome Trust ; MRC |
nif-0000-00105 | http://www.nitrc.org/projects/neuroconstruct | SCR_007197 | neuroConstruct: Biophysical Neural Network Modeling Software | 2026-08-20 09:27:30 | 11 | ||||||
|
3DViewnix Resource Report Resource Website 1+ mentions |
3DViewnix (RRID:SCR_007351) | 3DViewnix | software application, d visualization software, data processing software, software resource | Data-, machine-, and application- independent software system for the visualization and analysis of multidimensional images. This transportable, very inexpensive software system, has capabilities for visualizing, manipulating, and analyzing multidimensional, multimodality image information. It is designed to run on Unix machines under X-windows. It uses a data protocol that is a multidimensional generalization of the ACR-NEMA standards. We have tested it extensively on SGI and Sun workstations and PCs. Other recipients of 3DVIEWNIX have installed it on a variety of platforms including IBM RS6000s, HP700s, and Stardent, all from a single source code version. UNIQUE FEATURES OF 3DVIEWNIX * Transportable - based on UNIX, X-window, and C * Based on multidimensional generalization of ACR-NEMA standards of data representation * Application-independent * Image dimensionality independent * Can handle rigid, non-rigid, static, and dynamic objects and object assemblies * Can handle object information from multiple modalities and longitudinal acquisitions * Multitudes of visualization, manipulation, and analysis methods incorporated * Open software system distributed with source code | 3d imaging, registration, segmentation, visualization, volume, multi-modal, image |
is listed by: 3DVC is listed by: Biositemaps has parent organization: University of Pennsylvania; Philadelphia; USA |
PMID:12821028 | Open software system distributed with source code | nif-0000-00257 | SCR_007351 | 2026-08-20 09:27:21 | 1 | |||||||
|
REGARDS - REasons for Geographic and Racial Differences in Stroke Resource Report Resource Website 100+ mentions |
REGARDS - REasons for Geographic and Racial Differences in Stroke (RRID:SCR_007228) | portal, topical portal, data or information resource | The REasons for Geographic and Racial Differences in Stroke (REGARDS) project, sponsored by the National Institutes of Health (NIH), is a national study focusing on learning more about the factors that increase a person''s risk of having a stroke. REGARDS is an observational study of risk factors for stroke in adults 45 years or older. 30,239 participants were recruited between January 2003 and October 2007. They completed a telephone interview followed by an in-home physical exam. Measurements included traditional risk factors such as blood pressure and cholesterol levels, and an echocardiogram of the heart. At six month intervals, participants are contacted by phone to ask about stroke symptoms, hospitalizations and general health status. The study is ongoing and will follow participants for many years. The purpose of the REGARDS project is to understand why people in some parts of the country develop more strokes than people in other parts of the country, and why blacks develop more strokes than whites. We hope to learn how to reduce the number of people having strokes. | has parent organization: National Institutes of Health | Department of Health and Human Services ; NINDS U01 NS041588 |
nif-0000-01878 | SCR_007228 | REGARDS, REasons for Geographic and Racial Differences in Stroke | 2026-08-20 09:27:32 | 123 | |||||||||
|
Bone Marrow Donors Worldwide Resource Report Resource Website 1+ mentions |
Bone Marrow Donors Worldwide (RRID:SCR_007186) | portal, topical portal, data or information resource | Bone Marrow Donors Worldwide (BMDW) is the continuing effort to collect the HLA phenotypes of volunteer stem cell donors and cord blood units, and is responsible for the co-ordination of their worldwide distribution. Participants are 63 stem cell donor registries from 44 countries, and 43 cord blood banks from 25 countries. The current number of donors and cord blood units in the BMDW database is: 14,605,618 (14,178,976 donors and 426,642 CBU''s The original goal to collect the HLA phenotypes of volunteer stem cell donors and cord blood units, and to co-ordinate their world-wide distribution remain their primary goals. But new initiatives have been added: - To maximise the chance of finding a stem cell donor or cord blood unit by providing access to all stem cell donors and cord blood units available in the world. - To minimise the effort required for stem cell donor or cord blood unit searches: only registries with potential stem cell donors or cord blood units need to be contacted. - To provide an estimate of the chance of finding a stem cell donor or cord blood unit for a given patient. - To provide advanced search programs to identify partially matched stem cell donors or cord blood units. - To facilitate search advice requests via the Internet. - To facilitate improvements in family search strategies. - To provide relevant general information for the benefit of the patient. - To provide statistics on the increase of different registries, the number of DNA typed donors, etc. Sponsors: Bone Marrow Donors Worldwide is an initiative of the Immunobiology Working Party of the European Group of Blood and Marrow Transplantation (EBMT) in 1988. Keyworss: Bone marrow, Donor, Cell, Phenotype, Stem cell, Cord blood unit, | nif-0000-30155 | SCR_007186 | BMDW | 2026-08-20 09:27:31 | 8 | |||||||||||
|
Vision Public Information Network Resource Report Resource Website |
Vision Public Information Network (RRID:SCR_007340) | portal, topical portal, data or information resource | The National Eye Institute (NEI) created the VISION Public Information Network for the purpose of communicating with public information officers at NEI grantee institutions. The Network''s primary mission is to work with the NEI in disseminating research results to the national and local media. The Network also works to inform the public of the mission of the National Institutes of Health (NIH) to improve the health of America through medical research. The NEI is part of the NIH, U.S. Department of Health and Human Services (DHHS). General information portal for eye and vision related resources for the public. Sponsors: This resource is supported by the National Eye Institute. | eye, grant, health, human, information, media, medical, network, research, vision | has parent organization: National Eye Institute (NEI) Commons | nif-0000-00236 | SCR_007340 | Vision Network | 2026-08-20 09:27:34 | 0 | |||||||||
|
Brown University Alpert Medical School Department of Molecular Pharmacology Physiology and Biotechnology Resource Report Resource Website |
Brown University Alpert Medical School Department of Molecular Pharmacology Physiology and Biotechnology (RRID:SCR_007222) | training resource, postdoctoral program resource, degree granting program, portal, data or information resource, organization portal, medical school program resource, department portal, undergraduate program resource, graduate program resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented on August 20, 2021. Department of Molecular Pharmacology, Physiology, and Biotechnology has closed, effective June 30, 2021. Department of Molecular Pharmacology, Physiology and Biotechnology is basic science department within Brown Medical School, and is full participant in undergraduate based Program in Biology within Division of Biology and Medicine at Brown University. | has parent organization: Brown University; Rhode Island; USA | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-01905 | http://bms.brown.edu/mppb/index.html | SCR_007222 | BU MPPB, Brown MPPB, Brown University; MPPB | 2026-08-20 09:27:32 | 0 | ||||||||
|
California Institute of Technology; Division of Biology Resource Report Resource Website |
California Institute of Technology; Division of Biology (RRID:SCR_007221) | training resource, postdoctoral program resource, degree granting program, portal, data or information resource, organization portal, undergraduate program resource, graduate program resource | For more than 75 years, the division of biology has provided many of the major research advances that have made biology the premier science of the 21st century, and has trained many of the world''s most eminent biologists. The division at present has 38 professors of various ranks, who in their classes and laboratories have approximately 100 undergraduates, 100 graduate students, and 160 postdoctoral scholars, as well as more than 250 staff members. We occupy parts or all of seven buildings on the Caltech campus; we also operate a marine laboratory 50 miles from campus. Each building is devoted to state-of-the-art educational facilities and cutting-edge laboratories. We have three major research emphases: Structural, Molecular and Cell Biology; Developmental and Regulatory Biology; and Molecular, Cellular and Integrative Neuroscience. In each area we are trying to solve one of the great problems of modern biology: How do the proteins and other components of cells interact to provide a marvelous nanomachine of more than 100,000 integrated parts, a machine that has numerous extraordinary functions and can reproduce itself? How does a single cell become, by division and formation of new cell types, an entire multicellular organism, which in the case of humans has thousands of different cell types and more than 1 trillion different cells in specific places, communicating to form complex organs? How does the brain, the most complex organ of all, work to allow calculations beyond those of any computer, as well as to demonstrate amazing sensory capabilities, emotions, and consciousness? | is related to: The Pancreatic Beta-Cell Consortium | nif-0000-01909 | SCR_007221 | Caltech Biology, Biology at Caltech, Caltech; Division of Biology; Division of Biology at Caltech | 2026-08-20 09:27:17 | 0 | ||||||||||
|
Bayesian Analysis of Common NMR Problems Resource Report Resource Website 1+ mentions |
Bayesian Analysis of Common NMR Problems (RRID:SCR_007182) | software application, data processing software, software resource, data analysis software | Welcome to the Bayesian Analysis of Common NMR Problems software home page. This Bayesian analysis software is a series of programs with a Java interface that use Bayesian probability theory to solve common data analysis problems that occur in the sciences and in NMR in particular. Click here for a complete list of the applications addressed. The programs that run the various Bayesian analysis, the server software, were developed at Washington University by Dr. G. Larry Bretthorst and the Java language client interface was developed by Dr. Karen Marutyan. The combination of the server and client software is called the Bayesian Analysis of Common NMR Problems software. However, this name is slightly misleading because this software can analyze data from many different sources, not just NMR data. Additionally, unlike the previous interface to this software, this new interface does not require the user to have access to any specialized NMR software, i.e., this interface is completely independent of Varian''s VnmrJ, although the interface can load and process data from a Varian spectrometer. Sponsors: This resource is supported by the Washington University in St. Louis. Keywords: Analysis, Software, Java, Theory, Science, NMR, Server, Data, Spectrometer, | has parent organization: Washington University in St. Louis; Missouri; USA | nif-0000-30164 | SCR_007182 | Bayesian Analysis | 2026-08-20 09:27:15 | 5 | ||||||||||
|
Comprehensive Perl Archive Network Resource Report Resource Website 100+ mentions |
Comprehensive Perl Archive Network (RRID:SCR_007253) | portal, topical portal, data or information resource | Welcome to CPAN, where you you will find All Things Perl. CPAN is the Comprehensive Perl Archive Network, a large collection of Perl software and documentation. You can begin exploring from either http://www.cpan.org/, http://www.perl.com/CPAN/ or any of the mirrors listed at http://www.cpan.org/SITES.html. Note that CPAN is also the name of a Perl module, CPAN.pm, which is used to download and install Perl software from the CPAN archive. This FAQ covers only a little about the CPAN module and you may find the documentation for it by using perldoc CPAN via the command line or on the web at http://search.cpan.org/dist/CPAN/lib/CPAN.pm. Sponsors: CPAN works with the generosity and cooperation of hundreds of developers, over 100 participating mirrors, funet.fi donating the network bandwidth, storage space and computing power, volunteers who help keep everything together and users whose interest in Perl keep the archive alive and growing. Keywords: Comprehension, Perl, Archive, Software, Documentation, |
is parent organization of: Catalyst Framework is parent organization of: go-db-perl is parent organization of: go-perl is parent organization of: ONTO-PERL is parent organization of: Generic GO Term Finder |
nif-0000-30267 | SCR_007253 | CPAN | 2026-08-20 09:27:32 | 102 | ||||||||||
|
EMBOSS CpGPlot/CpGReport/Isochore Resource Report Resource Website 1+ mentions |
EMBOSS CpGPlot/CpGReport/Isochore (RRID:SCR_007254) | portal, topical portal, data or information resource | This portal allows for the detection of regions of genomic sequences that are rich in the CpG pattern is important because such regions are resistant to methylation and tend to be associated with genes which are frequently switched on. Regions rich in the CpG pattern are known as CpG islands. The function of the program cpgplot is to plot CpG rich areas, and cpgreport to report all CpG rich regions. The nuclear genomes of vertebrates are mosaics of isochores, very long stretches of DNA that are homogeneous in base composition and are compositionally correlated with the coding sequences that they embed. Isochores can be partitioned in a small number of families that cover a range of GC levels. Program isochore plots GC content over a sequence. Sponsors: This resource is supported by European Bioinformatics Institute. Keywords: Software, Plotting, Pattern, CpG, Gene, Function, Isochore, DNA, Genome, Homogeneous, Coding, Sequence, Family, Sequencing, | has parent organization: European Bioinformatics Institute | nif-0000-30268 | SCR_007254 | EMBOSS | 2026-08-20 09:27:18 | 5 | ||||||||||
|
Brain Architecture Management System Resource Report Resource Website 1+ mentions |
Brain Architecture Management System (RRID:SCR_007251) | BAMS | storage service resource, service resource, controlled vocabulary, ontology, data or information resource, data repository, database | Knowledge management system designed to handle neurobiological information at different levels of organization of vertebrate nervous system. Database and repository for information about neural circuitry, storing and analyzing data concerned with nomenclature, taxonomy, axonal connections, and neuronal cell types. Handles data and metadata collated from original literature, or inserted by scientists that is associated to four levels of organization of vertebrate nervous system. Data about expressed molecules, neuron types and classes, brain regions, and networks of brain regions. | neurobiology, vertebrate, nervous, system, database, repository, neural, circuitry, analysis, data, nomenclature, taxonomy, axonal, connection, cell, |
is used by: NIF Data Federation is used by: Integrated Nervous System Connectivity is related to: Integrated Manually Extracted Annotation has parent organization: University of Southern California; Los Angeles; USA is parent organization of: BAMS Nested Regions is parent organization of: BAMS Connectivity is parent organization of: BAMS Cells is parent organization of: BAMS Neuroanatomical Ontology |
NIBIB ; Human Brain Project ; NIMH MH61223; NINDS NS16686; NINDS NS50792 |
Restricted | nif-0000-00018 | http://brancusi.usc.edu/bkms/ | SCR_007251 | Brain Architecture Management System, The Brain Architecture Management System | 2026-08-20 09:27:33 | 6 | |||||
|
CASPLab: Comet Assay Software Project Laboratory Resource Report Resource Website 10+ mentions |
CASPLab: Comet Assay Software Project Laboratory (RRID:SCR_007249) | portal, data or information resource, organization portal, laboratory portal, software resource | CASP is a tool to image analysis in comet assay. CASP has been developed to work with either color, or gray-scale images of fluorescence-stained comets saved in TIF format. In its present version CASP does not control a video or CCD camera. Comets stained with silver (dark cells on white background) must be converted into negative images in order to be analysed correctly. An unlimited number of images can be marked, CASP will load them successively into a image view window (see screenshot). Only comets oriented from left (head) to right (tail) can be analysed correctly. The user can adjust various thresholds of sensitivity and save the adjustments for future use. A measurement frame is drawn on the screen and its size adjusted. The adjustments are frozen to prevent accidental modification. The frame is moved onto a cell and measurement is activated. An intensity profile shows up on a profile window together with selected result values (right window on figure 1) and the result can be saved. In addition to such parameter as head radius, tail length etc, the program calculates the tail moment (TM) and the Olive tail moment (OTM). If several cells are present on the same picture, the user can proceed with the measurement of another cell on the same picture or can load a new picture. The saved results can be visualized during the working session in a spreadsheet in view results window. When measurements are terminated, the results can be exported into a text file and imported into a commercial spreadsheet calculation program. CASP is optimized for a 600x800 resolution. Sponsors: This work has been supported by the University of Wroclaw. Keywords: Comet, Assay, Software, Laboratory, Camera, Negative, Cell, Analysis, Image, | has parent organization: University of Wroclaw; Wroclaw; Poland | nif-0000-30299 | SCR_007249 | CASPLab | 2026-08-20 09:27:32 | 47 | ||||||||||
|
FisWidgets Resource Report Resource Website |
FisWidgets (RRID:SCR_007367) | software application, data processing software, software resource, data analysis software | A set of Java libraries for rapidly creating GUIs for software modules (C, C++, Fortan, PERL scripts, etc.), and graphically controlling process flow among them. This allows a GUI to be created for existing image processing and analysis routines, which provides: 1) graphic elements for setting parameters, arguments, etc. (i.e., text dialogs, file browsers, etc.); 2) links to web based documentation; 3) simple point-and-click interface for setting up a path for data flow from one module to another. The purpose of FisWidgets is to provide an integrated and user-friendly environment for using the disparate and growing array of image processing and analysis tools created by different laboratories. | has parent organization: University of Pittsburgh; Pennsylvania; USA | nif-0000-00302 | http://neurocog.lrdc.pitt.edu/fiswidgets/ | SCR_007367 | 2026-08-20 09:27:21 | 0 | ||||||||||
|
CardioGenomics Resource Report Resource Website 1+ mentions |
CardioGenomics (RRID:SCR_007248) | CardioGenomics | portal, topical portal, data or information resource | The primary goal of the CardioGenomics PGA is to begin to link genes to structure, function, dysfunction and structural abnormalities of the cardiovascular system caused by clinically relevant genetic and environmental stimuli. The principal biological theme to be pursued is how the transcriptional network of the cardiovascular system responds to genetic and environmental stresses to maintain normal function and structure, and how this network is altered in disease. This PGA will generate a high quality, comprehensive data set for the functional genomics of structural and functional adaptation of the cardiovascular system by integrating expression data from animal models and human tissue samples, mutation screening of candidate genes in patients, and DNA polymorphisms in a well characterized general population. Such a data set will serve as a benchmark for future basic, clinical, and pharmacogenomic studies. Training and education are also a key focus of the CardioGenomics PGA. In addition to ongoing journal clubs and seminars, the PGA will be sponsoring symposia at major conferences, and developing workshops related to the areas of focus of this PGA. Information regarding upcoming events can be found in the Events section of this site, and information about training and education opportunities sponsored by CardioGenomics can be found on the Teaching and Education page. The CardioGenomics project came to a close in 2005. This server, cardiogenomics.med.harvard.edu, remains online in order to continue to distribute data that was generated by investigators under the auspices of the CardioGenomics Program for Genomic Applications (PGA). :Sponsors: This resource is supported by The National Heart, Lung and Blood Institute (NHLBI) of the NIH., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | genomics, clinical, genetic, environmental, stimulus, cardiovascular, disease, data, expression, gene, dna, polymorphism, population, pharmacogenomic, training, education | has parent organization: Harvard University; Cambridge; United States | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-30296 | http://www.cardiogenomics.org | SCR_007248 | The CardioGenomics Project | 2026-08-20 09:27:33 | 6 |
Can't find your Tool?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.
Welcome to the dkNET Resources search. From here you can search through a compilation of resources used by dkNET and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that dkNET has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on dkNET then you can log in from here to get additional features in dkNET such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
If you are logged into dkNET you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the facets that you can filter the data by.
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant U24DK097771.
Email: info_at_ dknet.org
