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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Biotium inc Resource Report Resource Website 10+ mentions |
Biotium inc (RRID:SCR_013538) | antibody supplier, commercial organization, material resource, reagent supplier | An Antibody supplier | nlx_152313 | SCR_013538 | SciCrunch Registry | 2026-09-26 02:17:12 | 13 | ||||||||||||
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Michigan Alzheimer's Disease Center Resource Report Resource Website |
Michigan Alzheimer's Disease Center (RRID:SCR_008773) | MADC | data or information resource, disease-related portal, portal, topical portal | An Alzheimer's disease center which aims to conduct and promote research on Alzheimer's disease and enhance public and professional understanding of dementia through education and outreach efforts. The MADC promotes clinical research on memory and aging which involves the direct use of research volunteers, biomarkers, and other clinical data collected through the University of Michigan Memory and Aging Project. | alzheimer's disease, biomarker, clinical, dementia, neurodegenerative disease, clinical study |
has parent organization: University of Michigan Medical School; Michigan; USA is parent organization of: Michigan Alzheimer's Disease Center Brain Bank |
Aging | Private funds | Public, Investigators wishing to utilize the research volunteer database must complete the Clinical Resource Application | nlx_144106 | http://www.med.umich.edu/alzheimers/index.html | SCR_008773 | SciCrunch Registry | Michigan Alzheimer's Disease Center, University of Michigan Health System Alzheimer's Disease Center | 2026-09-26 02:17:10 | 0 | ||||
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Michael Stern Parkinsons Research Foundation Resource Report Resource Website |
Michael Stern Parkinsons Research Foundation (RRID:SCR_008098) | data or information resource, disease-related portal, funding resource, portal, topical portal |
THIS RESOURCE IS NO LONGER IN SERVICE, documented on May 18th, 2016. A foundation that was founded in 2001, and sponsors academic centers throughout the US. The MIchael Stern Parkinson's Research Foundation focuses its efforts mainly on finding the causes of the disease, finding effective treatments, and discovering a cure for the disease. The foundation is notably looking into dopamine and its effects on neural connections, as well its possibility to be used for treatment. Dr. Greengard has assembled a close knit group of more than 25 outstanding scientists who are focused on translating the fundamental understandings about the dopamine system into new treatments for Parkinson's. The core team of researchers is based at the Stern Foundation laboratory on the campus of The Rockefeller University interacts continually with collaborators from the United Kingdom, France, Sweden, Italy, Japan and Korea. This global presence ensures that no promising research lead is overlooked, and that progress can be made on multiple fronts simultaneously. As the Foundation grew it was able to expand its support for critical neurological research to two other institutions, Harvard University's McLean Hospital, where we support the research of Dr. Ole Isacson whose research lab, The Stern Center for Neuroregeneration Research is using gene therapy to protect the most vulnerable neurons in PD models; and the Institute for Neurodegenerative Disorders, where Yale Professors Dr. Ken Marek and Dr. John Seibyl are developing novel tools for early detection and monitoring of Parkinson's disease by studying physiologic, biochemical and neuroimaging biomarkers for non-dominergic manifestations of Parkinsonism. :NIF thanks the Parkinson's Disease Foundation, http://www.pdf.org for their referral of this resource to us. |
parkinson's disease, research, treatment | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-11735 | SCR_008098 | SciCrunch Registry | 2026-09-26 02:17:12 | 0 | ||||||||||
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BioPortal Metadata Ontology Resource Report Resource Website |
BioPortal Metadata Ontology (RRID:SCR_010167) | BP-METADATA | controlled vocabulary, data or information resource, ontology | Ontology that represents the structure that BioPortal uses to represent all of its metadata (ontology details, mappings, notes, reviews, views) | owl |
is listed by: BioPortal is related to: Provisional Cell Ontology |
nlx_157328 | http://www.bioontology.org/wiki/index.php/BioPortal_Metadata | SCR_010167 | SciCrunch Registry | 2026-09-26 02:17:10 | 0 | ||||||||
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CEREP: In Vitro Pharmacology Resource Report Resource Website |
CEREP: In Vitro Pharmacology (RRID:SCR_007233) | analysis service resource, biomaterial analysis service, material analysis service, production service resource, service resource | Cerep offers a panel of over 630 validated in vitro pharmacological assays that cover a broad range of targets including receptors, ion channels, transporters, enzymes and second messengers. These assays are used to identify lead compounds, to define mechanism of action, and to identify off-target activities. All assays are available on an ad hoc basis. At any time, clients can select one or more assays to be tested against one or more compounds at one or more concentrations. In addition to ad hoc access, client specific and Cerep profiles are available. Client specific profiles can be adapted using any of the over 630 Cerep assays. Standard Profiles are designed by Cerep and available to all clients. The Standard Profiles are a rapid and cost effective way of prioritizing the most promising compounds in the lead selection process. Benefiting from increased efficiency generated from optimized processes, Cerep is happy to expand custom made profiles clients can design at set prices. While offering more flexibility, clients are able to select among predefined lists of functional GPCR, kinase and binding assays. Keywords: In vitro, Pharmacology, Assay, Target, Receptor, Ion channel, Transporter, Enzyme, Mechanism, Hoc, Compound, Kinase, GPCR, Secondary messenger, | nif-0000-30248 | SCR_007233 | SciCrunch Registry | CEREP Pharmacology | 2026-09-26 02:17:09 | 0 | |||||||||||
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CLC Genomics Workbench Resource Report Resource Website 100+ mentions |
CLC Genomics Workbench (RRID:SCR_011853) | data analysis software, data processing software, data visualization software, software application, software resource | Commercially available software for visualization and analysis of next generation sequencing data. Used for viewing, exploring, and sharing of NGS analysis results. Complete toolkit for genomics, transcriptomics, epigenomics, and metagenomics in one program. | ngs, next, generation, sequencing, gene, rna, visualisation, analysis |
is listed by: OMICtools is listed by: SoftCite works with: CLC Genomics Server |
Restricted | SCR_016245, OMICS_01124 | SCR_011853 | SciCrunch Registry | 2026-09-26 02:17:11 | 187 | |||||||||
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CaresBio Laboratory Resource Report Resource Website 1+ mentions |
CaresBio Laboratory (RRID:SCR_012393) | CBL | access service resource, commercial organization, core facility, service resource | CaresBio Laboratory (CBL) is a contract research organization, serving as a translational link with the one stop service approach to close the gaps between basic and clinical sciences for biomedical science community. We are serving academic laboratories, CROs, biotechnology and pharmaceutical companies and research organizations by providing high quality and cost effective pre-clinical and clinical research services. If you are doing biomarker and or drug discovery and development; therapeutics and translational research along with the applications of genomics and proteomics study; data validation and analysis; histopathology, immunohistochemistry, pathology or other immunostaining, imaging; histomorphometry, image analysis; small animal imaging; screening, efficacy and toxicity testing of your candidate compounds. We also provide biostatistics analysis of pre-clinical and or clinical data, data base developments or any subcategories of these fields. We do assay developments and provide customized assays to match your needs. | is listed by: ScienceExchange | SciEx_12995 | SCR_012393 | SciCrunch Registry | CaresBio Laboratory LLC | 2026-09-26 02:17:11 | 2 | |||||||||
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Linkage Disequilibrium Analyses for Quantitative and Discrete Traits Resource Report Resource Website 1+ mentions |
Linkage Disequilibrium Analyses for Quantitative and Discrete Traits (RRID:SCR_013365) | data or information resource, database, software application, software resource | How is association mapping going to help me find genes? During the past decade, the genes for a large number of rare mendelian traits have been identified. However, traditional linkage analyses lack power and precision when applied to complex disease. Association mapping, which compares the effects of different chromosomal variants, may be more successful at identifying genes of small effect. How does QTDT help association mapping? Association mapping can produce misleading results when the study population is not homogeneous, but includes individuals with different genetic backgrounds. Family based association tests, commonly referred to as TDTs (Transmission Disequilibrium Tests), do not produce misleading results in these circumstances. QTDT can use all the information in a pedigree to construct powerful tests of association that are robust in the presence of stratification. What does the Q stant for ? Q stands for Quantitative. Quantitative traits provide effective descriptions of many complex diseases, including asthma. For many of these conditions, all or nothing definitions of disease are arbitrary and unsatisfactory. QTDT incorporates variance components methodology in the analysis of family data and includes exact estimation of p-values for analysis of small samples and non-normal data. The QTDT abbreviation (for Quantitative Transmission Disequilibrium Tests) was first used by David Allison in his 1997 paper. This research was supported in part by the intramural program of the National Eye Institute and by National Institutes of Health Grants EY016862, EY007758, EY09859, EY012118, P30-EY014801, EY-014458, EY014467, HL084729, and HG002651, by the Foundation Fighting Blindness, the Macula Vision Research Foundation, the American Health Assistance Foundation, Research to Prevent Blindness, the Pew Charitable Trusts, the Mayo Clinic Foundation, the Casey Macular Degeneration Center Fund, the Marion W. and Edward F. Knight AMD Fund, the Harold and Pauline Price Foundation, National Genotyping Centre of Spain, and the Elmer and Sylvia Sramek Foundation. The Center for Inherited Disease Research, fully funded through a federal contract (HHSN268200782096C) from National Institutes of Health to | has parent organization: University of Michigan; Ann Arbor; USA | nif-0000-31385 | SCR_013365 | SciCrunch Registry | QTDT | 2026-09-26 02:17:15 | 7 | ||||||||||
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Integrated Digitized Biocollections Resource Report Resource Website 100+ mentions |
Integrated Digitized Biocollections (RRID:SCR_014336) | iDigBio | data repository, service resource, storage service resource | iDigBio is the National Resource for Advancing Digitization of Biodiversity Collections (ADBC) funded by the National Science Foundation. Through ADBC, data and images for millions of biological specimens are being made available in electronic format for the research community, government agencies, students, educators, and the general public. | biospecimen | NSF Cooperative Agreement EF-1115210 | Open | r3d100011126 | https://doi.org/10.17616/R3J90V | SCR_014336 | SciCrunch Registry | 2026-09-26 02:17:12 | 116 | |||||||
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Analyst®TF Software Resource Report Resource Website 10+ mentions |
Analyst®TF Software (RRID:SCR_015785) | data acquisition software, data processing software, software application, software resource | Acquisition software for mass spectrometry data from TripleTOF instrument(s). Analyst provides functionality for instrument control, data analysis, reporting, and audit trail. | mass spectrometry, ms acquisition, lc-ms acquisition, tripletof instrument, instrument control, data analysis, audit trail | Commercially available, Available for academic use, Available for purchase | SCR_015785 | SciCrunch Registry | Analyst Software, Analyst, Analyst TF, Analyst TF Software | 2026-09-26 02:17:16 | 39 | ||||||||||
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Core Genotyping Facility Resource Report Resource Website 10+ mentions |
Core Genotyping Facility (RRID:SCR_008438) | data or information resource, laboratory portal, organization portal, portal | With remarkable advances in genomic technologies, the National Cancer Institute established the Core Genotyping Facility (CGF) to investigate the contribution of germline genetic variation to cancer susceptibility and outcomes. Working in concert with epidemiologists, biostatisticians and basic research scientists in the intramural research program, the CGF has developed the capacity to conduct genome-wide association studies and candidate gene approaches to identify the heritable determinants of various forms of cancer. In order to ensure the accuracy and timely completion of all CGF provided operations, the following Information Systems were developed. While the investigator does not have direct access to these systems, their availability to CGF staff members greatly aids in their querying and reporting capabilities. In turn this provides benefit to the investigator by providing the most up to date reporting possible. The Core Genotyping Facility (CGF) offers a wide variety of sample preparation and genotyping operations. All samples received must meet minimum requirements and are taken through the Sample Handling pipeline prior to completing any genotyping. The Sample Handling pipeline includes DNA quantification and genetic fingerprinting. Also offered are Whole Genome Amplification (WGA) assays, to get the most yield out of low quantity DNA samples. Theirr genotyping products cover a wide-range of assay sizes. The CGF operates the Illumina BeadLab system which supports Illumina assay technologies including the whole genome genotyping Infinium assays, custom GoldenGate OPA assays, and Custom Infinium (iSelect) assays. In addition, the CGF offers Affymetrix GeneChip arrays and uniplex TaqMan genotyping. Sponsors: CGF is supported by the SAIC-Frederick. :Keywords: Genomic, Technology, Cancer, Genotyping, Germline, Genetic, Epidemiologist, Biostatistician, Research, Gene, Assay, Genotype, Pipeline, Genome, DNA, : | has parent organization: National Cancer Institute | nif-0000-30251 | SCR_008438 | SciCrunch Registry | CGF | 2026-09-26 02:17:10 | 10 | ||||||||||
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Baylor University Department of Psychology and Neuroscience Resource Report Resource Website |
Baylor University Department of Psychology and Neuroscience (RRID:SCR_007224) | data or information resource, department portal, organization portal, portal | Goal of Department is creation and dissemination of knowledge in psychological sciences, fostering environment conducive to creative scholarship and learning among both students and faculty, and application of knowledge to betterment and service of society. Offers Bachelor of Science and Bachelor of Arts degree in Psychology as well as few undergraduate degree programs in Neuroscience. | has parent organization: Baylor University; Texas; USA | nif-0000-01894 | SCR_007224 | SciCrunch Registry | Baylor University Psychology & Neuroscience, Baylor University Psychology and Neuroscience, Baylor Psychology and Neuroscience | 2026-09-26 02:17:09 | 0 | ||||||||||
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PhysioNet Resource Report Resource Website 500+ mentions |
PhysioNet (RRID:SCR_007345) | PhysioNet | analysis service resource, data analysis service, data or information resource, data repository, database, production service resource, service resource, storage service resource | Collection of dissemination and exchange recorded biomedical signals and open-source software for analyzing them. Provides facilities for cooperative analysis of data and evaluation of proposed new algorithm. Providies free electronic access to PhysioBank data and PhysioToolkit software. Offers service and training via on-line tutorials to assist users at entry and more advanced levels. In cooperation with annual Computing in Cardiology conference, PhysioNet hosts series of challenges, in which researchers and students address unsolved problems of clinical or basic scientific interest using data and software provided by PhysioNet. All data included in PhysioBank, and all software included in PhysioToolkit, are carefully reviewed. Researchers are further invited to contribute data and software for review and possible inclusion in PhysioBank and PhysioToolkit. Please review guidelines before submitting material. | physiologic, physiology, signal, software, research, biomedical, cardiopulmonary, neural, healthy, patient, cardiac, death, congestive heart failure, epilepsy, gait, disorder, sleep apnea, cardioogy, computation, physiologic signal, workspace, time series, FASEB list, DRKB |
is recommended by: National Library of Medicine is recommended by: NIDDK Information Network (dkNET) is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases is listed by: DataCite is listed by: re3data.org is listed by: FAIRsharing has parent organization: Massachusetts Institute of Technology; Massachusetts; USA; is parent organization of: CHB-MIT Scalp EEG Database is parent organization of: EEG Motor Movement/Imagery Dataset is parent organization of: Sleep-EDF Database |
Aging | NIBIB ; NIGMS ; NIH EB037545 |
PMID:22256277 PMID:14716615 PMID:14632011 PMID:11446213 PMID:10851218 |
Free, Freely available | r3d100011561, DOI:10.17616/R3D06S, nif-0000-00250, DOI:10.25504/FAIRsharing.bemzxg, DOI:10.13026 | https://doi.org/10.17616/R3D06S, https://doi.org/10.17616/r3d06s, https://doi.org/10.13026/, https://dx.doi.org/10.13026/, https://fairsharing.org/10.25504/FAIRsharing.bemzxg, https://doi.org/10.17616/R3D06S | SCR_007345 | SciCrunch Registry | Physionet: The Research Resource for Complex Physiologic Signals, PhysioNet, PhysioNet: The Research Resource for Complex Physiologic Signals | 2026-09-26 02:17:09 | 841 | |||
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SNPFILE Resource Report Resource Website 1+ mentions |
SNPFILE (RRID:SCR_009402) | software application, software library, software resource, software toolkit | Software library and API for manipulating large SNP datasets with associated meta-data, such as marker names, marker locations, individuals'' phenotypes, etc. in an I/O efficient binary file format. In its core, SNPFile assumes very little about the metadata associated with markers and individuals, but leaves this up to application program protocols. (entry from Genetic Analysis Software) | gene, genetic, genomic, c++, linux, unix | is listed by: Genetic Analysis Software | nlx_154641 | SCR_009402 | SciCrunch Registry | 2026-09-26 02:17:10 | 1 | ||||||||||
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Barts and The London School of Medicine and Dentistry Labs and Facilities Resource Report Resource Website |
Barts and The London School of Medicine and Dentistry Labs and Facilities (RRID:SCR_012710) | Barts and The London School of Medicine and Dentistry Labs & Facilities | access service resource, core facility, data or information resource, portal, service resource | Barts and The London offers international levels of excellence in research and teaching while serving a population of unrivalled diversity. Through partnership with our linked trusts, notably Barts and The London NHS Trust, and our associated University Hospital Trusts _������������_ Homerton, Newham, Whipps Cross and Queen''''s (Romford) the School''''s research and teaching is informed by an exceptionally wide ranging and stimulating clinical environment. |
is listed by: ScienceExchange is related to: Queen Mary University of London Labs and Facilities is related to: Blizard Institute of Cell and Molecular Science Labs and Facilities has parent organization: Queen Mary University of London; London; United Kingdom |
SciEx_8912 | SCR_012710 | SciCrunch Registry | 2026-09-26 02:17:11 | 0 | ||||||||||
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Salamons Neuroanatomy and Neurovasculature Web-Atlas Resource Resource Report Resource Website 1+ mentions |
Salamons Neuroanatomy and Neurovasculature Web-Atlas Resource (RRID:SCR_007343) | Neuroanatomy and Neurovascular Atlas | atlas, data or information resource, training resource | Annotated images of human brain derived from CT, MRI, angiography and post-mortem sections and drawings. Brain vasculature: arteries, arterioles, veins. Pathological specimens. Quizzes and general information on brain structures and clinical syndromes. Extensive collection of images, many from pathological conditions. | neuroanatomy | has parent organization: University of California at Los Angeles; California; USA | nif-0000-00247 | SCR_007343 | SciCrunch Registry | Neuroanatomy and Neurovascular Atlas | 2026-09-26 02:17:09 | 2 | ||||||||
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Marshall University Medical Center Marshall Neuroscience Resource Report Resource Website |
Marshall University Medical Center Marshall Neuroscience (RRID:SCR_007460) | data or information resource, department portal, organization portal, portal | Purpose of Neuroscience department is to treat diseases of central and peripheral nervous systems and their supporting elements including skull and spine, as single system, utilizing expertise of variety of specialists, closely interacting with one another professionally with regard primarily for care of individual patient and their particular situation.Neuroscience department is committed to teaching and research in the fields of neurology and neruosurgery. Residents and medical students are welcome to rotate with us, or to join us for any of our scheduled lectures and conferences. | has parent organization: Marshall University Joan C. Edwards School of Medicine; West Virginia; USA | nif-0000-01992 | http://musom.marshall.edu/medctr/neuroscience/index.asp | SCR_007460 | SciCrunch Registry | Marshall University JCESOM Department of Neuroscience | 2026-09-26 02:17:09 | 0 | |||||||||
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MyBioSource Resource Report Resource Website 100+ mentions |
MyBioSource (RRID:SCR_013493) | antibody supplier, commercial organization, material resource, reagent supplier | An Antibody supplier | nlx_152416 | SCR_013493 | SciCrunch Registry | MyBioSource Inc., MyBioSource.com, MyBioSource Inc | 2026-09-26 02:17:12 | 184 | |||||||||||
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Cogent 2000 Resource Report Resource Website 100+ mentions |
Cogent 2000 (RRID:SCR_015672) | data processing software, signal processing software, software application, software resource, software toolkit | MATLAB Toolbox for presenting stimuli and recording responses with precise timing. It also provides additional utilities for the manipulation of sound, keyboard, mouse, joystick, serial port, parallel port, subject responses and physiological monitoring hardware. | matlab, timing, physiological monitoring, subject response, stimulus presenting, response recording | has parent organization: Wellcome Trust | Free, Available for download, Acknowledgment requested, Account required, Demo available | SCR_015672 | SciCrunch Registry | Cogent | 2026-09-26 02:17:13 | 224 | |||||||||
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HBP: Healthy Brain Project Resource Report Resource Website |
HBP: Healthy Brain Project (RRID:SCR_013137) | HBP | data or information resource, disease-related portal, portal, research forum portal, topical portal | Research forum portal to address brain status by acquiring comprehensive, multimodal data from healthy humans across the lifespan to characterize brain status, assess its change over time, and associate composite descriptors of brain status. Specifically, the measurements are acquired noninvasively by existing neuroimaging technologies (structural MRI, functional MRI, magnetic resonance spectroscopy, diffusion MRI, and magnetoencephalography); in addition, genetic, cognitive, language, and lifestyle data are acquired. Goals: * Derive the Brain Health Index- An integrative assessment of brain status derived from multimodal measurements of brain structure, function, and chemistry. * Continue acquiring data to construct the first-ever databank on brain, cognitive, language and genetic measurements for healthy people across the lifespan. * Provide a novel and unique dataset by which to: characterize brain status, assess its change over time, and associate it with genetic makeup, cognitive function, and language abilities. * Forecast future brain health and disease based on current measurements and guide physicians towards new interventions and evaluate interventions as they develop. * Extend to siblings and other family members to further assess the genetic influences and inheritability. | cognition, language, genetic, cognitive, brain, structure, function, longitudinal, multimodal, neuroimaging, adult human, late adult human, neurological exam, neuropsychological exam, cognitive assessment, structured interview, questionnaire, mental health status, structural mri, fmri, mr spectroscopy, diffusion mri, meg, dna, genetic assessment, montreal cognitive assessment, 3ms, mmse, language assessment, lifestyle, controlled oral word association test | has parent organization: University of Minnesota Twin Cities; Minnesota; USA | Aging, Healthy | nlx_153925 | SCR_013137 | SciCrunch Registry | Healthy Brain Project, Minnesota Women Healthy Brain Project, Women Healthy Brain Project, Minnesota Healthy Brain Project | 2026-09-26 02:17:11 | 0 |
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