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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Resource Report Resource Website |
Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester (RRID:SCR_015313) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Center that concentrates on the common, adult form of the disease, autosomal dominant PKD (ADPKD). The services provided focus on understanding the genetic basis of disease, more accurately monitoring disease progression and improving prognostics, and employing model systems to explore pathogenesis and conduct preclinical testing. | polycystic kidney disease, pathogenesis, preclinical testing |
is listed by: NIDDK Information Network (dkNET) has parent organization: Mayo Clinic Minnesota; Minnesota; USA is parent organization of: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Model Systems Core is parent organization of: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Human Imaging Core is parent organization of: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Molecular Genetics and Biomarker Core has organization facet: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Human Imaging Core has organization facet: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Model Systems Core has organization facet: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Molecular Genetics and Biomarker Core |
Polycystic Kidney Disease | NIDDK P30DK090728 | Available to the research community | SCR_015313 | 2026-09-19 12:53:07 | 0 | ||||||||
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O'Brien Kidney Centers Resource Report Resource Website 1+ mentions |
O'Brien Kidney Centers (RRID:SCR_015270) | data or information resource, disease-related portal, portal, resource, topical portal | Research program whose aim is to make state-of-the art technologies and resources accessible to a broad spectrum of investigators pursuing studies in kidney research areas. | renal, program, kidney, research, centers |
is listed by: NIDDK Information Network (dkNET) is affiliated with: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases has organization facet: Duke O'Brien Center for Kidney Research has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis has organization facet: UAB-UCSD Core Center for Acute Kidney Injury Research has organization facet: Pittsburgh Center for Kidney Research has organization facet: University of Michigan Kidney Translational Core Center has organization facet: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center has organization facet: George M. O'Brien Kidney Center at Yale |
NIDDK P30 DK17005 | Available to the research community | https://www.niddk.nih.gov/research-funding/current-opportunities/rfa-dk-17-005 | SCR_015270 | 2026-09-19 12:53:07 | 1 | ||||||||
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Vanderbilt Diabetes Research and Training Center Resource Report Resource Website |
Vanderbilt Diabetes Research and Training Center (RRID:SCR_015153) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | University-affiliated center that facilitates the discovery, application, and translation of scientific knowledge to improve the lives of people with diabetes. | diabetes research, training service |
is listed by: NIDDK Information Network (dkNET) has parent organization: Vanderbilt University; Tennessee; USA is parent organization of: Vanderbilt Diabetes Research and Training Center Transgenic Mouse and ES Cell Shared Resource is parent organization of: Vanderbilt Diabetes Research and Training Center Metabolic Physiology Shared Resource is parent organization of: Vanderbilt Diabetes Research and Training Center Vanderbilt Diet Body Composition and Metabolism Core Facility is parent organization of: Vanderbilt Diabetes Research and Training Center Islet Procurement and Analysis Core is parent organization of: Vanderbilt Diabetes Research and Training Center Cell Imaging Shared Resource Core Facility is parent organization of: Vanderbilt Diabetes Research and Training Center Hormone Assay and Analytical Services Core Facility has organization facet: Vanderbilt Diabetes Research and Training Center Cell Imaging Shared Resource Core Facility has organization facet: Vanderbilt Diabetes Research and Training Center Hormone Assay and Analytical Services Core Facility has organization facet: Vanderbilt Diabetes Research and Training Center Islet Procurement and Analysis Core has organization facet: Vanderbilt Diabetes Research and Training Center Metabolic Physiology Shared Resource has organization facet: Vanderbilt Diabetes Research and Training Center Transgenic Mouse and ES Cell Shared Resource has organization facet: Vanderbilt Diabetes Research and Training Center Vanderbilt Diet Body Composition and Metabolism Core Facility is organization facet of: Diabetes Research Centers |
Diabetes | NIDDK DK20593 | Available to the research community | SCR_015153 | 2026-09-19 12:53:06 | 0 | ||||||||
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Indiana O'Brien Center for Advanced Microscopic Analysis Resource Report Resource Website |
Indiana O'Brien Center for Advanced Microscopic Analysis (RRID:SCR_015271) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Imaging center which provides renal and urological researchers access to intravital optical microscopy and 3-dimensional quantitative digital image analysis. | kidney imaging center, kidney imaging analysis, microscopy center, microscopic analysis center |
is listed by: NIDDK Information Network (dkNET) has parent organization: Indiana University School of Medicine; Indiana; USA is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Biosensor Development Core is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Administration Core is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Digital Image Analysis Core is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Education Core is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Probe Delivery Core is parent organization of: Indiana O'Brien Center for Advanced Microscopic Analysis Intravital Microscopy Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Intravital Microscopy Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Digital Image Analysis Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Probe Delivery Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Biosensor Development Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Education Core has organization facet: Indiana O'Brien Center for Advanced Microscopic Analysis Administration Core is organization facet of: O'Brien Kidney Centers |
NIDDK P30DK079312 | Available to the research community | SCR_015271 | 2026-09-19 12:53:07 | 0 | |||||||||
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Gregory Fleming James Cystic Fibrosis Research Center Resource Report Resource Website |
Gregory Fleming James Cystic Fibrosis Research Center (RRID:SCR_015392) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Research center that maintains core facilities available for studies of cell biology, ion transport, and translational aspects of cystic fibrosis research. | cystic fibrosis foundation, ion transport, cell biology, cystic fibrosis research center |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Alabama at Birmingham School of Medicine; Alabama; USA is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Assay Core is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Clinical and Translational Core is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Transmembrane Conductance Regulator Expression Core is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Animal Models Core is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Cell Model and Evaluation Core has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Assay Core has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Cell Model and Evaluation Core has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Animal Models Core has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Clinical and Translational Core has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Transmembrane Conductance Regulator Expression Core is organization facet of: Cystic Fibrosis Research and Translation Centers |
Cystic Fibrosis | NIDDK P30DK072482; Cystic Fibrosis Foundation |
Available to the research community | SCR_015392 | 2026-09-19 12:53:08 | 0 | ||||||||
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Template Project Resource Report Resource Website |
Template Project (RRID:SCR_015516) | NIAG | data or information resource, organization portal, portal, project portal | Project to house templates used to build other projects. It is also known as the NeuroImaging and Analysis Group, which employs various physiological, functional and structural neuroimaging methodologies in both research and clinical domains. | template, project template, project-building, neuroimaging, analysis | SCR_015516 | NeuroImaging and Analysis Group | 2026-09-19 12:53:09 | 0 | ||||||||||
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Mixed Effect Model of Genetic-Set and Environment Interaction Resource Report Resource Website |
Mixed Effect Model of Genetic-Set and Environment Interaction (RRID:SCR_015514) | data or information resource, model, software resource, software toolkit | MATLAB Toolbox which provides a mixed effect model for gene-environment interaction (MixGE) on neuroimaging phenotypes, such as structural volumes and tensor-based morphometry (TBM). This model incorporates both fixed and random effects of genetic-set and environment interaction in order to investigate homogeneous and heterogeneous contributions of sets of genetic variants and their interactions with environmental risks to phenotypes. | gene environment interaction, gene environment interaction model, neuroimaging phenotype |
uses: MATLAB is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: National University of Singapore; Singapore; Singapore |
Singapore National Research Foundation Singapore-NMRC/TCR/004-NUS/2008; Singapore National Research Foundation Singapore-NMRC/TCR/012-NUHS/2014; Singapore Ministry of Health National Medical Research Council NMRC/CBRG/0039/2013; Singapore Ministry of Education Academic Research Fund Tier 2 MOE2012-T2-2-130 |
Free for non-commercial use | SCR_015514 | Mixed Effect Model of Genetic Set and Environment Interaction, Mixed Effect Model of Genetic Set and Environment Interaction Toolbox, MixGE Toolbox | 2026-09-19 12:53:09 | 0 | ||||||||
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TurboFIRE Resource Report Resource Website 1+ mentions |
TurboFIRE (RRID:SCR_015518) | data analysis software, data processing software, software application, software resource | Real-time task-based and resting-state fMRI analysis software. This software is developed and distributed to researchers by NeurInsight LLC. | fmri, fmri analysis, resting-state | Available to affiliated researchers | SCR_015518 | 2026-09-19 12:53:09 | 4 | |||||||||||
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BZ 9000 Fluorescence Microscope Resource Report Resource Website 10+ mentions |
BZ 9000 Fluorescence Microscope (RRID:SCR_015486) | Microscope system performs fluorescence, bright-field and phase-contrast imaging on various specimen holders. The system allows users to switch between four fluorescent channels, automatically adjusting the filter and exposure time while preserving the longevity of the specimen. | microscope, fluorescence microscope, fluorescence microscopy | Commercially available | https://www.photonics.com/Product.aspx?PRID=47416 | SCR_015486 | BZ-9000 Fluorescence Microscope | 2026-09-19 12:53:08 | 15 | ||||||||||
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StatCheck Resource Report Resource Website 10+ mentions |
StatCheck (RRID:SCR_015487) | authoring tool, software application, software resource, web application | Statistical checking software for psychology manuscripts. Users can upload APA-formatted PDF or HTML files to find errors in statistical reporting. | statistical check, statistical error, manuscript check | Free, Public | SCR_015487 | 2026-09-19 12:53:08 | 10 | |||||||||||
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Neurocare: Neuroconn DC-Stimulator Plus Resource Report Resource Website 1+ mentions |
Neurocare: Neuroconn DC-Stimulator Plus (RRID:SCR_015520) | tDCS | instrument resource | Device for administering transcranial electrical stimulation. It has applications in cranial electrotherapy that provides a weak direct current for non-invasive Interventional Neurophysiology. | commercial resource, material resource, hardware, transcranial electrical stimulation, cranial electrotherapy, tES, instrument, equipment, USEDit | PMID:26889687 | Commercially available, Available for purchase | https://drive.google.com/file/d/1SPn3_PCUego80oGB2-uPK7aUTmv62wry/view?usp=drivesdk | https://info.neurocaregroup.com/hubfs/neuroCare_May_2021/pdf/pb_dcsp_en.pdf | SCR_015520 | 2026-09-19 12:53:09 | 7 | |||||||
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Ilastik Resource Report Resource Website 500+ mentions |
Ilastik (RRID:SCR_015246) | data processing software, image analysis software, image processing software, segmentation software, software application, software resource | Tool for interactive image classification, segmentation and analysis, built as a modular software framework, which currently has workflows for automated (supervised) pixel- and object-level classification, automated and semi-automated object tracking, semi-automated segmentation and object counting without detection. | machine learning, supervised learning, beginner software, image classification, image segmentation, image analysis | is related to: Webilastik | Heidelberg Collaboratory for Image Processing ; HHMI Janelia Farm Research Campus ; CellNetworks Excellence Cluster |
DOI:10.1109/ISBI.2011.5872394 DOI:10.1038/s41592-019-0582-9 |
Free, Freely available, Available for download | SCR_015246 | ilastik, Interactive Learning And Segmentation Toolkit (Ilastik), Interactive Learning And Segmentation Toolkit | 2026-09-19 12:53:07 | 755 | |||||||
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Spectrum Labs Resource Report Resource Website 1+ mentions |
Spectrum Labs (RRID:SCR_015488) | Commercial organization which supplies products for bioseparation and cell line management. | filtration, filtration product, bioseparation | SCR_015488 | Spectrum Labs Inc | 2026-09-19 12:53:09 | 9 | ||||||||||||
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DTI FiberTrak MR Clinical application Resource Report Resource Website |
DTI FiberTrak MR Clinical application (RRID:SCR_015521) | data analysis software, data processing software, image analysis software, resource, software application, software resource | Instrument and software tool used to visualize, trace, analyze, and process white matter fiber tracts of Diffusion Tensor Imaging (DTI) data in real-time. It supports pre-operative surgical planning, post-surgery evaluation, and general evaluation of fiber tracts around tumors and lesions in connection with functional areas. | white matter fiber tract, dti analysis, diffusion tensor imaging analysis, surgical preparation, surgical evaluation, hardware, instrument, equipment | Commercially available | SCR_015521 | Philips DTI FiberTrak, DTI FiberTrak | 2026-09-19 12:53:09 | 0 | ||||||||||
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LTR_Finder Resource Report Resource Website 500+ mentions |
LTR_Finder (RRID:SCR_015247) | analysis service resource, data access protocol, production service resource, service resource, software resource, web service | Web software capable of scanning large-scale sequences for full-length LTR retrotranspsons., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | Long Terminal Repeat retrotransposons, Long Terminal Repeat, retrotransposon prediction, genome sequences, LTR prediction, LTR structure prediction, DNA sequence, biotools |
is listed by: Debian is listed by: bio.tools |
Fudan University ; Shanghai ; China |
PMID:17485477 | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_020944, biotools:ltr_finder | https://bio.tools/ltr_finder | SCR_015247 | LTR Finder | 2026-09-19 12:53:07 | 807 | |||||
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Cystic Fibrosis Center - University of Washington Resource Report Resource Website |
Cystic Fibrosis Center - University of Washington (RRID:SCR_015401) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Research center that aims to provide resources and expertise to expedite development of potential new therapeutic approaches to correct dysfunctional CFTR and its secondary consequences, enhance understanding of evolving bacterial ecosystems and resultant host response in CF gastrointestinal and respiratory tracts, and how these interactions impact health. It also aims to develop improved assays, new drug screening assays, biomarkers and improved clinical outcome measures, as well as to better understand the metabolic and inflammatory consequences of CFTR dysfunction. | cftr therapy, cystic fibrosis translational research, cftr dysfunction |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Washington; Seattle; USA is parent organization of: Cystic Fibrosis Center - University of Washington Administrative and Enrichment Core is parent organization of: Cystic Fibrosis Center - University of Washington Host Response Core is parent organization of: University of Washington Genomics Core Cystic Fibrosis Research Translation Center and Research Development Program is parent organization of: Cystic Fibrosis Center - University of Washington Microbiology Core is parent organization of: Cystic Fibrosis Center - University of Washington Clinical Core has organization facet: Cystic Fibrosis Center - University of Washington Clinical Core has organization facet: Cystic Fibrosis Center - University of Washington Microbiology Core has organization facet: University of Washington Genomics Core Cystic Fibrosis Research Translation Center and Research Development Program has organization facet: Cystic Fibrosis Center - University of Washington Host Response Core has organization facet: Cystic Fibrosis Center - University of Washington Administrative and Enrichment Core is organization facet of: Cystic Fibrosis Research and Translation Centers |
Cystic Fibrosis | NIDDK P30DK089507 | Available to the research community | SCR_015401 | 2026-09-19 12:53:08 | 0 | ||||||||
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Marshall BioResources Resource Report Resource Website 10+ mentions |
Marshall BioResources (RRID:SCR_015489) | biomaterial supply resource, material resource, organism supplier | Commercial provider of purpose-bred animals for biomedical research. They provide dogs, pigs, ferrets, mice, and guinea pigs in physically and psychologically healthy condition. | animal provider, purpose bred animal, beagle, hound, mongrel, minipig, influenza free ferret | is recommended by: Assessment and Accreditation of Laboratory Animal Care International | SCR_015489 | 2026-09-19 12:53:09 | 34 | |||||||||||
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Atomify LAMMPS Resource Report Resource Website 1+ mentions |
Atomify LAMMPS (RRID:SCR_015240) | mobile app, simulation software, software application, software resource | Mobile simulation app for visualizing molecular interactions in liquids, solids and gases. The simulations are performed with the molecular dynamics code LAMMPS. | molecular physics, molecular simulation, molecular interaction | Open source, Available for Android phones | SCR_015240 | Atomify | 2026-09-19 12:53:07 | 6 | ||||||||||
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Encode Resource Report Resource Website 1000+ mentions |
Encode (RRID:SCR_015482) | consortium, data or information resource, data set, organization portal, portal | Consortium to build comprehensive parts list of functional elements in human genome. This includes elements that act at protein and RNA levels, and regulatory elements that control cells and circumstances in which gene is active. Data from 2012-present. | genome, sequencing, protein, rna, dna, consortium |
is related to: modENCODE is related to: ENCODE is related to: 3D Genome has parent organization: Stanford University; Stanford; California has parent organization: University of California at Santa Cruz; California; USA |
NHGRI HG006992 | PMID:15499007 | Free, Freely available | SCR_015482 | ENCODE Project | 2026-09-19 12:53:08 | 1293 | |||||||
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Transcriptome architecture of adult mouse brain Resource Report Resource Website 1+ mentions |
Transcriptome architecture of adult mouse brain (RRID:SCR_015483) | data or information resource, image collection | Image collection of transcriptome architecture of adult mouse brain revealed by sparse coding of genome-wide in situ hybridization images. | mouse brain architecture, mouse brain image, in situ hybridization image | DOI:10.1007/s12021-017-9333-1 | Public | SCR_015483 | 2026-09-19 12:53:08 | 2 |
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The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant U24DK097771.
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