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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
CDC Laboratory Quality Assurance and Standardization Programs Resource Report Resource Website 50+ mentions |
CDC Laboratory Quality Assurance and Standardization Programs (RRID:SCR_015000) | gold standard | Standardization program which helps assure the quality of laboratory test data and results so patients, healthcare providers, researchers, and public health officials can be confident that laboratory test results they receive are accurate. CDC services include reference materials, proficiency testing, training, guideline creation, and consultations. Quality assurance and standardization programs can be can be customized by and for users and laboratories. | standardization program, quality assurance, lab test data, accurate data | has parent organization: Centers for Disease Control and Prevention | Available to the research community | SCR_015000 | 2026-09-19 12:53:05 | 83 | ||||||||||
|
Bio Breeders Resource Report Resource Website |
Bio Breeders (RRID:SCR_014951) | biomaterial supply resource, material resource, organism supplier | Developer of specialized and appropriate hamster models for research on human diseases. These specialized hamsters have features similar to those seen in certain human diseases. Bio Breeders provides these specialized hamsters to the biomedical community worldwide. | hamster model, mice colony, myopathic hamster, animal test subject, rodent, hamster | Commercially available, Available to the research community | SCR_014951 | Bio Breeders Inc., Bio Breeders Inc | 2026-09-19 12:53:04 | 0 | ||||||||||
|
Pituitary Network Association Resource Report Resource Website 1+ mentions |
Pituitary Network Association (RRID:SCR_015006) | PNA | data or information resource, disease-related portal, patient-support portal, portal, topical portal | International non-profit organization for patients, relatives, and physicians with pituitary tumors and disorders. | pituitary gland, patient support, clinical trial, patient advocacy organization | Pituitary tumor, Pituitary disorder | Public | SCR_015006 | Pituitary Network Association (PNA) | 2026-09-19 12:53:05 | 1 | ||||||||
|
National Adrenal Diseases Foundation Resource Report Resource Website |
National Adrenal Diseases Foundation (RRID:SCR_015007) | NADF | data or information resource, disease-related portal, portal, topical portal | Foundation to support research in and diagnosis of adrenal diseases. The portal provides basic information about adrenal diseases as well as a community for patients. | improve treatment, improve diagnosis | SCR_015007 | 2026-09-19 12:53:05 | 0 | |||||||||||
|
pCASL Analysis Resource Report Resource Website 1+ mentions |
pCASL Analysis (RRID:SCR_015004) | data or information resource, portal, software resource, source code | Collection of analysis scripts for pCASL (pseudo-Continuous ASL) data. | pseudo-Continuous ASL, arterial spin labeling | PMID:17826940 | SCR_015004 | 2026-09-19 12:53:05 | 5 | |||||||||||
|
University of Washington Diabetes Research Center Resource Report Resource Website 1+ mentions |
University of Washington Diabetes Research Center (RRID:SCR_015126) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | University-affiliated center to support both basic and clinical research in diabetes and related metabolic disorders with the ultimate purpose of translating findings into opportunities to prevent these diseases and to improve clinical care and outcomes. | diabetes, metabolic disorder, clinical research |
is listed by: NIDDK Information Network (dkNET) is affiliated with: Diabetes Research Centers has parent organization: University of Washington; Seattle; USA is parent organization of: University of Washington Diabetes Research Center Quantitative and Functional Proteomics Core Facility is parent organization of: University of Washington Diabetes Research Center Vector and Transgenic Mouse Core is parent organization of: University of Washington Diabetes Research Center Cell Function Analysis Core Facility is parent organization of: University of Washington Diabetes Research Center Human Studies Core Facility is parent organization of: University of Washington Diabetes Research Center Cellular and Molecular Imaging Core is parent organization of: University of Washington Diabetes Research Center Administrative Core has organization facet: University of Washington Diabetes Research Center Administrative Core has organization facet: University of Washington Diabetes Research Center Cell Function Analysis Core Facility has organization facet: University of Washington Diabetes Research Center Cellular and Molecular Imaging Core has organization facet: University of Washington Diabetes Research Center Human Studies Core Facility has organization facet: University of Washington Diabetes Research Center Quantitative and Functional Proteomics Core Facility has organization facet: University of Washington Diabetes Research Center Vector and Transgenic Mouse Core is organization facet of: Diabetes Research Centers |
Diabetes | NIDDK P30DK017047 | Available to the research community | SCR_015126 | 2026-09-19 12:53:06 | 2 | ||||||||
|
Johns Hopkins University - University of Maryland Diabetes Research Center Resource Report Resource Website |
Johns Hopkins University - University of Maryland Diabetes Research Center (RRID:SCR_015086) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Center whose goal is to understand the causes of both type 1 and 2 diabetes and promotes translational research that is aimed at reducing the burden of these diseases in the U.S. It has a specific focus on childhood diabetes and diabetes that affects minority populations. | diabetes research, child diabetes, endocrinology |
is listed by: NIDDK Information Network (dkNET) has parent organization: Johns Hopkins University School of Medicine; Baltimore, Maryland; USA has parent organization: University of Maryland; Maryland; USA is parent organization of: Johns Hopkins University - University of Maryland Diabetes Research Center Health and Populations Science Core is parent organization of: Johns Hopkins University - University of Maryland Diabetes Research Center Gene Editing Core is parent organization of: Johns Hopkins University - University of Maryland Diabetes Research Center Cell Biology Core is parent organization of: Johns Hopkins University - University of Maryland Diabetes Research Center Administrative Core is parent organization of: Johns Hopkins University - University of Maryland Diabetes Research Center Molecular and Translational Genomics Core has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Administrative Core has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Cell Biology Core has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Integrated Physiology Core has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Gene Editing Core has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Molecular and Translational Genomics Core has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Health and Populations Science Core is organization facet of: Diabetes Research Centers |
Type 1 diabetes, Type 2 diabetes, Diabetes | NIDDK P30DK079637 | Available to the research community | SCR_015086 | 2026-09-19 12:53:06 | 0 | ||||||||
|
MeroX Resource Report Resource Website 50+ mentions |
MeroX (RRID:SCR_014956) | data analysis software, data processing software, sequence analysis software, software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on June 29,2023. Software tool for the analysis of cross-linking/mass spectrometry datasets using MS-cleavable cross-linkers. MeroX is specialized for MS/MS-cleavable cross linking reagents and identifies the specific fragmentation products of the cleavable cross links. | sequence analysis software, cross linking, mass spectrometry, MS cleavage, fragmentation, cleavable cross link, bio.tools |
is listed by: Debian is listed by: bio.tools is related to: StavroX |
PMID:25261217 | THIS RESOURCE IS NO LONGER IN SERVICE | BioTools:MeroX, biotools:MeroX | https://bio.tools/MeroX, https://bio.tools/MeroX, https://bio.tools/MeroX | SCR_014956 | 2026-09-19 12:53:04 | 74 | |||||||
|
Brown Family Enterprises Resource Report Resource Website |
Brown Family Enterprises (RRID:SCR_014953) | biomaterial supply resource, material resource, organism supplier | Research facility and licensed commercial research animal breeder that specializes in custom polyclonal antibody production, contract research, animal models for research, and animal tissue procurement. Brown Family Enterprises can make and distribute custom polyclonal antibodies using rabbits, goats, sheep, and horses. | polyclonal antibody, custom antibody, animal model, animal blood product, animal breeder, Brown Research, tissue procurement, rabbit, goat, sheep, horse | Commercially available | http://brownfamilyenterprises.com/oldmain.htm | http://brownfamilyenterprises.com/oldmain.htm | SCR_014953 | Brown Family Enterprises LLC | 2026-09-19 12:53:04 | 0 | ||||||||
|
BUSCO Resource Report Resource Website 5000+ mentions |
BUSCO (RRID:SCR_015008) | algorithm resource, data analysis software, data processing software, software application, software resource | Software tool to quantitatively measure genome assembly and annotation completeness based on evolutionarily informed expectations of gene content. | genome assembly, annotation completeness, quantitative method, bio.tools |
is used by: rnaQUAST is recommended by: CEGMA is listed by: Debian is listed by: bio.tools is related to: CEGMA works with: BUSCOMP |
Marie Curie International Outgoing Fellowship ; Swiss National Science Foundation |
DOI:10.1093/bioinformatics/btv351 | Free, Available for download, Freely available | biotools:busco | https://gitlab.com/ezlab/busco, https://bio.tools/busco, https://sources.debian.org/src/busco/ | SCR_015008 | BUSCO v2, Benchmarking Universal Single-Copy Orthologs (BUSCO), Benchmarking Universal Single-Copy Orthologs, BUSCO v1 | 2026-09-19 12:53:05 | 8320 | |||||
|
C.M. Rick Tomato Genetic Resources Center Resource Report Resource Website 100+ mentions |
C.M. Rick Tomato Genetic Resources Center (RRID:SCR_014954) | TGRC | biomaterial supply resource, material resource, organism supplier | Genebank of wild relatives, monogenic mutants and miscellaneous genetic stocks of tomato. TGRC offers seed samples for free to researchers worldwide. | tomato, tomato genetics, solanum, lycopersicon, seed germination, monogenic mutants, genebank, FASEB list | UC Davis ; USDA ; California Tomato Research Institute ; TGRC endowment |
Free, Available to the research community | SCR_014954 | C.M. Rick Tomato Genetic Resources Center (TGRC), Tomato Genetic Resources Center | 2026-09-19 12:53:04 | 113 | ||||||||
|
StavroX Resource Report Resource Website 50+ mentions |
StavroX (RRID:SCR_014957) | data analysis software, data processing software, sequence analysis software, software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on June 29,2023. Software tool for analyzing cross-linking/mass spectrometry datasets using any bifunctional cross-linker. It can be used to identify cross links of peptides – such as DSS, BS3, Disulfides, and zero-length – in complex mixtures. | sequence analysis software, peptide, cross linking, mass spectrometry, bifunctional cross linker, complex mixture | is related to: MeroX | DFG Si 867/13-1; DFG Si 867/15-1; BMBF ProNet-T3; BMBF Project To-06 |
PMID:22038510 DOI:10.1007/s13361-011-0261-2 |
THIS RESOURCE IS NO LONGER IN SERVICE | SCR_014957 | 2026-09-19 12:53:04 | 75 | ||||||||
|
VTK Resource Report Resource Website 50+ mentions |
VTK (RRID:SCR_015013) | data processing software, data visualization software, image processing software, software application, software resource, software toolkit | Cross-platform visualization software system for 3D computer graphics, image processing, and data visualization. Various visualization algorithms and advanced modeling techniques are supported within VTK, as well as parallel processing and interoperability with select databases. | open source visualization toolkit, visualization system, 3d computer graphics, image processing, FASEB list |
is used by: ParaView is used by: VolView is used by: Insight Segmentation and Registration Toolkit has parent organization: Kitware |
Open source, Available for download, Acknowledgement requested | https://gitlab.kitware.com/vtk/vtk | SCR_015013 | VTK 7.0.0, Visualization Toolkit, VTK 7.1 | 2026-09-19 12:53:05 | 98 | ||||||||
|
Robotic Flower System for Bee Behavior project Resource Report Resource Website |
Robotic Flower System for Bee Behavior project (RRID:SCR_021584) | data or information resource, instrument resource, portal, project portal | Portal provides system of robotic artificial flowers to study bumble bee behavior. System is designed to capture data when animal is feeding by placement of IR beams that are broken when engaged on flowers feeding mechanism and sends data to control unit.Developed by University of Oulu in Finland scientists. System includes control unit, separate artificial flowers, and personal computer. Control unit is to handle electronics of flowers, collect data from them, and to send data to computer. Flowers contain infrared sensor, their associated electronics, and electromechanical device that offers small, precise amount of sugar solution from reservoir. Computer runs software that controls refilling rate and data collection via the control unit. Circuit diagrams, parts list, and control software and source code are available in paper supplemental information. | Robotic artificial flowers, study bumble bee behavior, animal feeding data, flowers feeding mechanism, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1002/ece3.2062 | Free, Freely available | SCR_021584 | Robotic Flower System for Bee Behavior | 2026-09-19 12:54:55 | 0 | ||||||||
|
Homecage Task Training and Mesoscale Imaging project Resource Report Resource Website |
Homecage Task Training and Mesoscale Imaging project (RRID:SCR_021580) | data or information resource, instrument resource, portal, project portal | Project to build and use new generation of home cages with emphasis on training for simple headfixed tasks during simultaneous autonomous acquisition of mesoscale brain imaging data. Homecage platform for automated task training and mesoscale brain imaging for mice developed by University of British Columbia scientists. | Instrument, automated task training, mesoscale brain imaging, mice, OpenBehavior |
is listed by: OpenBehavior is related to: AutoHeadFix has parent organization: University of British Columbia; British Columbia; Canada |
DOI:10.7554/elife.55964 | Free, Freely available | SCR_021580 | Homecage Task Training and Mesoscale Imaging | 2026-09-19 12:54:55 | 0 | ||||||||
|
OpenMV project Resource Report Resource Website |
OpenMV project (RRID:SCR_021579) | data or information resource, instrument resource, portal, project portal | Portal provides system capable of frame differencing, color tracking, marker tracking, face detection, eye tracking, person detection (with TensorFlow Lite), and more. Supports very easy to use GUI, the OpenMV IDE. | Instrument, frame differencing, color tracking, marker tracking, face detection, eye tracking, person detection, OpenBehavior |
is listed by: OpenBehavior is related to: OpenMV |
Free, Freely available | SCR_021579 | OpenMV system | 2026-09-19 12:54:55 | 0 | |||||||||
|
Tetroplater Resource Report Resource Website |
Tetroplater (RRID:SCR_021578) | data or information resource, instrument resource, portal, project portal | Portal provides open source circuit for microwire tetrode gold plating. Circuit includes impedance meter and current generator for tetrode gold plating. Developed by University of Toyama scientist. | Instrument, neuronal activity, recording neuronal activity, microwire tetrode gold plating, OpenBehavior | is listed by: OpenBehavior | DOI:10.3791/1098 | Free, Freely available | SCR_021578 | 2026-09-19 12:54:55 | 0 | |||||||||
|
Pulse Pal Resource Report Resource Website |
Pulse Pal (RRID:SCR_021611) | software resource | Software tool as part of Pulse Pal system which allows users to create and trigger software defined trains of voltage pulses with high temporal precision. | voltage pulses, pulse train generator, OpenBehavior |
is listed by: OpenBehavior is related to: Pulse Pal project |
Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/pulse-pal/ | SCR_021611 | 2026-09-19 12:54:55 | 0 | |||||||||
|
OpenSpritzer Resource Report Resource Website |
OpenSpritzer (RRID:SCR_021575) | data or information resource, instrument resource, portal, project portal | Portal provides open hardware used in labs for administering picoliters of liquid to biological samples. Pressure ejection system developed by University of Sussex scientist for reliably delivering picolitre volumes. | Instrument, administering picoliters of liquid, pressure ejection system, delivering picolitre volumes, OpenBehavior |
is listed by: OpenBehavior has parent organization: University of Sussex; Brighton; United Kingdom |
DOI:10.1038/s41598-017-02301-2 | Free, Freely available | SCR_021575 | 2026-09-19 12:54:55 | 0 | |||||||||
|
Pulse Pal project Resource Report Resource Website |
Pulse Pal project (RRID:SCR_021576) | data or information resource, instrument resource, portal, project portal | Portal provides open source, low cost, programmable pulse train generator for physiology and behavior. Device allows users to create and trigger software defined trains of voltage pulses with high temporal precision. Arduino powered device that generates precise sequences of voltage pulses for neural stimulation and stimulus control. Controlled either through its APIs in MATLAB, Python and C plus plus, or as stand-alone instrument using its oLED screen and clickable thumb joystick. | Instrument, pulse train generator, Arduino powered device, neural stimulation, stimulus control, OpenBehavior |
is listed by: OpenBehavior is related to: Pulse Pal |
Free, Freely available | SCR_021576 | Pulse Pal system, Pulse Pal generator | 2026-09-19 12:54:55 | 0 |
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