Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
https://nanotempertech.com/prometheus/
Instrument that uses nanoDSF to analyze protein folding and stability. Provides precise stability data across multiple parameters to characterize thermal unfolding, particle sizing, and aggregation of proteins. Used in variety of applications, including protein engineering, membrane protein research, formulation development, and quality control.
Proper citation: Oxford: Nanopore Technologies: Prometheus (RRID:SCR_025758) Copy
https://mass-spec.stanford.edu/about/instruments
Bruker timsTOF Ultra boasts increased sensitivity and resolution whilst allowing for exceptionally low sample input and resolution whilst allowing for exceptionally low sample input.
Proper citation: Stanford Bruker timsTOF Ultra nanoLC/MS (RRID:SCR_025639) Copy
Tapestri single-cell DNA sequencing platform provides both genotype and phenotype data from the same cell. Platform consists of instrument, DNA cartridge, which represents microfluidics device, and reagents. Cartridge is equipped with reservoirs that are used to load reagents required for automated cell processing. Pressure supplied by instrument drives reagents from reservoirs through microfluidic device and out to PCR collection tubes that are mounted below cartridge. Cartridge and tubes can be loaded and unloaded from instrument and disposed of after completion of workflow. User interacts with instrument via touch screen interface, which can be used to select programs, monitor status of running programs, and more.
Proper citation: Mission Bio: Tapestri Platform (RRID:SCR_025736) Copy
https://www.thermofisher.com/order/catalog/product/A52864?SID=srch-srp-A52864
PCR System is plate based digital PCR platform powered by proprietary microfluidic array plate technology that enables all necessary steps for dPCR including compartmentalizing, thermal cycling and data acquisition to be conducted on single instrument. Uses nucleic acid quantification technique that allows absolute quantification without the need for standard curves. Bulk reaction mix is distributed or digitized into thousands of small independent reactions so that each micro-chamber contains either one or zero copies of the target. Statistical methods are then used to calculate the original concentrations based on the number of positive and negative micro-chambers.
Proper citation: Thermo Fisher: Applied Biosystems: QuantStudio Absolute Q Digital PCR System (RRID:SCR_025737) Copy
Open system to manage data without central server. Peer-to-peer content delivery network built around the content addressing: store, retrieve, and locate data based on fingerprint of its actual content rather than its name or location.
Proper citation: InterPlanetary File System (RRID:SCR_025685) Copy
https://github.com/ratan-lab/sumo
Software for multiomic nonnegative matrix factorization.
Proper citation: Ratan-lab (SUMO) (RRID:SCR_025687) Copy
Web bioinformatics platform that integrates interactive bioinformatics tools, original omics books, bioinformatics forums, and video tutorials. Used for RNA seq analysis, heat map illustration, etc.
Proper citation: Omicshare (RRID:SCR_025711) Copy
System for applications requiring high-quality Ultra High Performance Liquid Chromatography. Uses high pressure to separate and identify components of mixture. Provides accurate separation, retention times, peak area, detector sensitivity and reduced baseline noise for high flow rates.
Proper citation: Thermo Fisher: Vanquish Horizon UHPLC System (RRID:SCR_025713) Copy
https://pmc.ncbi.nlm.nih.gov/articles/PMC10731520/
Cost-effective, compact foot-print, and open-source Raspberry Pi-based widefield imaging system. Used for close-proximity dual-brain cortical mesoscale functional-imaging to simultaneously observe activity in two head-fixed animals in staged social touch-like interaction. We provide all schematics, code, and protocols for a rail system where head-fixed mice are brought together to a distance where the macrovibrissae of each mouse make contact.
Proper citation: Meso-Py (RRID:SCR_026530) Copy
https://www.gnu.org/software/gettext/
Software tools that provide framework to help other GNU packages produce multi-lingual messages.
Proper citation: gettext (RRID:SCR_026490) Copy
Ion trap mass spectrometer with electron transfer dissociation capabilities. Sets analytical standard for proteomics and small molecule applications.
Proper citation: Bruker: amaZon Speed ETD mass spectrometer (RRID:SCR_026526) Copy
https://www.bruker.com/en/products-and-solutions/mass-spectrometry/maldi-tof/rapiflex.html
Bruker MALDI-TOF mass spectrometry system. Enables time critical applications and faster decision making processes.
Proper citation: Bruker: rapifleX (RRID:SCR_026525) Copy
Triple Quadrupole Mass Spectrometer is liquid chromatograph mass spectrometer (LCMS) for fast, accurate detection, to quantify components of sample or to analyze their structure with increased specificity and sensitivity.
Proper citation: Shimadzu: LCMS-8060NX Triple Quad LC-MS/MS mass spectrometer (RRID:SCR_026527) Copy
Oven used to control the temperature of the column in a liquid chromatography LC system.CTO-40S Slim Line column oven is ideal for saving space while maintaining excellent thermal stability.
Proper citation: Shimadzu: Nexera HPLC/UHPLC Column Oven - CTO-40S (RRID:SCR_026529) Copy
The timsTOF SCP (single-cell proteomics) is mass spectrometer from Bruker. Ultra-high sensitivity instrument for quantitative single cell biology research with unbiased, deep single-cell 4D-Proteomics, immunopeptidomics, epiproteomics and PTM analysis. It features an additional separation in the tims cell where ions get separated according to their ion mobility, leading to collision cross-section values.Allows the analysis of hundreds of samples with minimal sample load (<200 ng) at sequencing speeds exceeding 100 Hz.
Proper citation: Bruker: timsTOF SCP mass spectrometer (RRID:SCR_026542) Copy
Spectrometer timsTOF Ultra 2 is paired with CaptiveSpray Ultra 2 ion source for high sensitivity to work with challenging samples and detect low-abundance peptides. Used to analyze even the smallest amounts and uncover previously unseen peptides.
Proper citation: Bruker: timsTOF Ultra 2 mass spectrometer (RRID:SCR_026541) Copy
Mass spectrometry (MS)-based proteomics instrument designed for shotgun proteomics and phosphoproteomics, leveraging Parallel Accumulation Serial Fragmentation (PASEF) technology to enhance speed, sensitivity, and resolution.
Proper citation: Bruker: timsTOF Pro mass spectrometer (RRID:SCR_026544) Copy
Mass spectrometer is equipped with the 4th generation high capacity TIMS-XR analyzer and advanced digitizer technology (ADT). Offers higher dynamic range for unmatched analytical depth and quantitation in high-throughput proteomics experiments.
Proper citation: Bruker: timsTOF HT mass spectrometer (RRID:SCR_026543) Copy
Mass spectrometer used for research, particularly in proteomics and metabolomics, leveraging Trapped Ion Mobility Spectrometry (TIMS) and Parallel Accumulation Serial Fragmentation (PASEF) technologies for enhanced 4D-omics capabilities.
Proper citation: Bruker: timsTOF Pro 2 mass spectrometer (RRID:SCR_026545) Copy
https://www.microscope.healthcare.nikon.com/products/confocal-microscopes/ax
Confocal microscope provides enables collection of more data over wide area and down to deep regions in tissues. Its high sensitivity and high-speed scanning reduce phototoxicity to specimen and minimize damage. Equipped with image acquisition/analysis functions utilizing Artificial Intelligence (AI), the AX/AX R can efficiently acquire highly reliable data. Nikon Spatial Array Confocal (NSPARC) detector utilizes detector array to collect two-dimensional image at each scanned point. It adds additional potential to imaging by providing new level of ultra-low noise sensitive spatial detection, enabling improved lateral resolution of 1 airy unit/~230 nm and improved signal-to-noise ratio.
Proper citation: Nikon: AXR NSPARC super resolution inverted microscope (RRID:SCR_026538) Copy
Can't find your Tool?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.
Welcome to the dkNET Resources search. From here you can search through a compilation of resources used by dkNET and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that dkNET has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on dkNET then you can log in from here to get additional features in dkNET such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
You can save any searches you perform for quick access to later from here.
We recognized your search term and included synonyms and inferred terms along side your term to help get the data you are looking for.
If you are logged into dkNET you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the sources that were queried against in your search that you can investigate further.
Here are the categories present within dkNET that you can filter your data on
Here are the subcategories present within this category that you can filter your data on
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
The NIDDK Information Network (dkNET) serves the needs of basic and clinical investigators by providing seamless access to large pools of data and research resources relevant to the mission of The National Institute of Diabetes Digestive and Kidney Diseases (NIDDK). dkNET is hosted at University of California San Diego, and is supported by NIH NIDDK grant U24DK097771.
Email: info_at_ dknet.org
