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Robotic liquid handling system that automates sample preparation for screening applications such as compound management, cell-based assays, and genomic assays. Compact liquid handler can be placed on small bench and fits in flow hood. With more than 60 accessories ranging from thermal cycler to shaker, the system can be tailored to automate most sample preparation protocols. VWorks control software allows users to create and run flexible liquid handling protocols.
Proper citation: Agilent: Bravo Automated Liquid Handling Platform (RRID:SCR_026137) Copy
https://bioconductor.org/packages/release/bioc/html/DropletUtils.html
Software R package provides number of utility functions for handling single-cell (RNA-seq) data from droplet technologies such as 10X Genomics. This includes data loading from count matrices or molecule information files, identification of cells from empty droplets, removal of barcode-swapped pseudo-cells, and downsampling of the count matrix.
Proper citation: DropletUtils (RRID:SCR_026136) Copy
https://allsheng.com.cn/product_cont_61.html
Nano-100 microspectrophotometer to measure concentration of nucleic acid, protein and cell solution. 0.5 to 2μl of sample volume is required for each measurement. No cuvette is required. At the end of measurement, sample could be either wiped off directly or recovered with pipettor.
Proper citation: ALLSHENG: Nano100 Micro-specrophotometer (RRID:SCR_026096) Copy
https://www.fishersci.com/shop/products/hm-355s-automatic-microtomes/p-4529952
Heavy duty, motorized microtome that can section large specimens with high quality. It's designed to be ergonomic and comfortable to use. Used for precise sectioning of hard and paraffin specimens in research, clinical, and industrial labs.
Proper citation: Thermo Fisher: Epredia HM 355S Automatic Microtome (RRID:SCR_026146) Copy
https://www.thermofisher.com/order/catalog/product/ULTIM3000RSLCNANO
System provides ProFlow technology for nano-flow applications and is designed to provide high resolution, speed, and sensitivity for low-flow LC or LCMS applications, such as proteomics and metabolomics. It has wide flow-pressure footprint that supports nano, capillary, and micro applications.
Proper citation: Thermo Fisher: Ultimate 3000 RSLCNano UPLC system (RRID:SCR_026145) Copy
http://ibs.biocuckoo.org/online.php
Software package called illustrator of biological sequences. Can be used for representing organization of either protein or nucleotide sequences. Multiple options are provided, and biological sequences can be manipulated, recolored or rescaled in user-defined mode. Final representational artwork can be directly exported into publication-quality figure. Used as illustrator for presentation and visualization of biological sequences. Standalone package was implemented in JAVA, while the online service was implemented in HTML5 and JavaScript. Both the standalone package and online service are freely available
Proper citation: Illustrator for Biological Sequences (RRID:SCR_026149) Copy
https://startresearch.com/preclinical/
Oncology translational research organization focused on development and utilization of Patient-Derived Xenograft models. Preclinical contract research organization specializing in patient-derived xenografts.
Proper citation: XenoSTART (RRID:SCR_026236) Copy
https://cbc.app.vumc.org/tnbc/
Website for predicting the subtype of triple negative breast cancer sample based on its gene expression profile.
Proper citation: TNBCtype (RRID:SCR_026238) Copy
Artificial Intelligence detection software developed to identify artificially generated text, such as those produced by large language models.
Proper citation: GPTZero (RRID:SCR_026197) Copy
Microsoft Excel Macro that automatically calculates and reports assay parameters of the Seahorse XF Cell Mito Stress Test as absolute Oxygen Consumption Rate in pmol O2/min and supports assay result data from all Agilent Seahorse XF Analyzers.
Proper citation: Agilent Seahorse XF Cell Mito Stress Test (RRID:SCR_026230) Copy
https://www.thegef.org/projects-operations/recipient-countries/
Provides information about family of funds for the environment. With GEF support,countries address the root causes of challenges as they strive for international environmental goals. Fund data from the Global Environment Facility.
Proper citation: Global Environment Facility (RRID:SCR_026241) Copy
https://www.bio-techne.com/instruments/simple-western
Protein characterization system that automated the Western blotting process from protein separation, immunoprobing, detection, and analysis of data.Gel-free, blot-free, and hands-free. It used glass rods and tubes to form a column that separated proteins by molecular weight. The Wes system was discontinued on July 30, 2021, but ProteinSimple will continue to support the platform through July 30, 2026. Users can upgrade to Jess or Abby to get the functionality of Wes with additional features.
Proper citation: Bio-Techne: ProteinSimple Wes Automated Western Blot System (RRID:SCR_026213) Copy
http://www.electrotek-scientific.co.uk
Company produces anaerobic workstations. Offers range of units to suit all sizes of laboratories and will consider manufacture of special cabinets to customers' own specification. Anaerobic workstations can also be used for microaerophylic and other types of work by using different gas supplies.
Proper citation: Electrotek (RRID:SCR_026207) Copy
https://CRAN.R-project.org/package=optmatch
Software package for optimal matching in R. Distance based bipartite matching using minimum cost flow, oriented to matching of treatment and control groups in observational studies. Routines are provided to generate distances from generalised linear models (propensity score matching), formulas giving variables on which to limit matched distances, stratified or exact matching directives, or calipers, alone or in combination.
Proper citation: optmatch (RRID:SCR_026185) Copy
Research institute in Esch-sur-Alzette, Luxembourg to study brain and its diseases. Collaboration between biologists, medical and computer scientists, physicists, engineers as well as mathematicians offers new insights into complex biological mechanisms and disease processes, with the aim of developing new tools for diagnostics, prevention, and therapy. LCSB has established strategic partnerships with scientific partners worldwide and with all major biomedical research units in Luxembourg. Carries out collaborative projects with hospitals and research-oriented companies, accelerating translation of fundamental research results into clinical applications.
Proper citation: Luxembourg Centre for Systems Biomedicine (RRID:SCR_026168) Copy
https://lifescience.evidentscientific.com.cn/zh/microscopes/upright/bx63/
Fully motorized system allows automation of complex multidimensional experiments. Uses motorized nosepiece to focus onto sample, enabling stage to be fixed for added stability.
Proper citation: Olympus: BX63 Automated Fluorescence Microscope (RRID:SCR_026203) Copy
https://www.nanion.de/products/patchliner/
Fully automated patch clamp system which records from either 4 or 8 cells simultaneously. Automated electrophysiology machine.
Proper citation: Nanion: Patchliner (RRID:SCR_026365) Copy
Provides flexibility to choose from up to 30 fluorescence channels utilizing up to 5 lasers with up to 30 independent detectors.
Proper citation: Agilent: NovoCyte Penteon Flow Cytometer (RRID:SCR_026297) Copy
https://www.bmglabtech.com/en/clariostar-plus/
Multi-mode microplate reader that measures chemical, biological, and physical reactions in microplates. It comes equipped with our LVF Monochromators, filters, and spectrometer. The instrument is upgradable and can be equipped with non-isotopic detection technologies:UV/vis absorbance, Fluorescence intensity, including FRET,Luminescence (flash and glow), including BRET,Fluorescence polarization/anisotropy,Time-resolved fluorescence, including TR-FRET AlphaScreen / AlphaLISA / AlphaPlexTM. Atmospheric Control Unit, temperature incubation, multiple shaking, well scan and reagent injectors make the CLARIOstar Plus the ideal platform for any live cell-based assay.
Proper citation: BMG Labtech: CLARIOstar Plus (RRID:SCR_026330) Copy
Flow-based reader, is multiplexing platform from Luminex with fast read time, compatibility with both 96- and 384-well plates, and ease of integration with front-end automation systems for high-throughput applications. Can analyze up to 500 analytes in single sample and is compatible with all R &D System Luminex assays and Quantist Analysis Software.
Proper citation: RnD Systems: Luminex Flexmap 3D (RRID:SCR_026299) Copy
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