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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Cooperative Study Group for Autoimmune Disease Prevention Resource Report Resource Website |
Cooperative Study Group for Autoimmune Disease Prevention (RRID:SCR_006803) | CSGADP | knowledge environment, resource | Collaborative network of investigators with a focus on prevention of autoimmune disease, defined as halting the development of autoimmune disease prior to clinical onset by means other than global immunosuppression, and an emphasis on Type 1 diabetes. Its mission is to engage in scientific discovery that significantly advances knowledge for the prevention and regulation of autoimmune disease. The specific goals enunciated in pursuit of this mission are: * To create improved models of disease pathogenesis and therapy to better understand immune mechanisms that will provide opportunities for prevention strategies * To use these models as validation platforms with which to test new tools applicable to human studies * To encourage core expertise and collaborative projects designed for rapid translation from animal to human studies, emphasizing the development of surrogate markers for disease progression and/or regulation which can be utilized in the context of clinical trials | prevention, clinical, immune, model, disease pathogenesis, therapy |
is listed by: NIDDK Information Network (dkNET) is listed by: NIDDK Research Resources |
Type 1 diabetes, Diabetes, Autoimmune disease | NIAID ; NIDDK ; NICHD ; NIH Office of Research on Womens Health ; Juvenile Diabetes Research Foundation International |
nlx_152797 | SCR_006803 | 2026-09-12 01:02:36 | 0 | |||||||
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GATACA GUDMAP Gene Explorer Resource Report Resource Website |
GATACA GUDMAP Gene Explorer (RRID:SCR_014518) | data or information resource, database | A database which can be used to search for genes critical for a variety of Genito-Urinary system functions and diseases. | genito-urinary system, genes, genetic diseases |
uses: GUDMAP Ontology is listed by: NIDDK Information Network (dkNET) has parent organization: GenitoUrinary Development Molecular Anatomy Project |
NIDDK | Freely available | SCR_014518 | 2026-09-12 01:02:14 | 0 | |||||||||
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University of Michigan Center for Gastrointestinal Research In Vivo Animal and Human Studies Core Resource Report Resource Website 1+ mentions |
University of Michigan Center for Gastrointestinal Research In Vivo Animal and Human Studies Core (RRID:SCR_015608) | biomaterial supply resource, material resource, tissue bank | Core facility that consists of the following 4 distinct programs: In Vivo Small Animal Studies Program, Organoid/Enteroid Modeling Program, Biospecimens Banking Service, and Clinical Design and Statistics. | in vivo, animal and human studies, gastrointestinal research |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Michigan Center for Gastrointestinal Research is organization facet of: University of Michigan Center for Gastrointestinal Research |
digestive disease | NIDDK P30 DK034933 | Available to affiliated researchers | SCR_015608 | 2026-09-12 01:02:16 | 1 | ||||||||
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University of Chicago Digestive Diseases Research Core Center Tissue and Cell Imaging Core Resource Report Resource Website |
University of Chicago Digestive Diseases Research Core Center Tissue and Cell Imaging Core (RRID:SCR_015607) | biomaterial supply resource, material resource, tissue bank | Core whose services include anatomic pathology review of human and experimental animal tissues as well as consultation in the best approaches for such analyses, cost-effective and high quality processing and staining of formalin-fixed paraffin-embedded tissues, and making collections of human tissue and imaging technologies available to researchers. | tissue and cell imaging, gastrointestinal pathology, imaging technology, anatomic pathology |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Chicago Digestive Diseases Research Core Center is organization facet of: University of Chicago Digestive Diseases Research Core Center |
digestive disease | NIDDK P30 DK042086 | Available to the research community, Available to affiliated researchers, Available to DDRCC researchers | SCR_015607 | 2026-09-12 01:02:16 | 0 | ||||||||
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MitoCarta Resource Report Resource Website 100+ mentions |
MitoCarta (RRID:SCR_018165) | data or information resource, database | Collection of genes encoding proteins with strong support of mitochondrial localization. Inventory of genes encoding mitochondrial-localized proteins and their expression across 14 mouse tissues. Database is based on human and mouse RefSeq proteins that are mapped to NCBI Gene loci. MitoCarta 2.0 inventory provides molecular framework for system-level analysis of mammalian mitochondria. | Gene, protein, mitochondrial protein, protein expression, data, human, mouse, RefSeq protein, analysis, mammalian mitochondra, FASEB list | Australian NHMRC ; Burroughs Wellcome Fund Career Award in the Biomedical Sciences ; Charles E. Culpeper Scholarship in Medical Science ; Howard Hughes Medical Institute ; NIDDK DK43351; NIDDK DK57521; NIGMS GM0077465 |
PMID:26450961 PMID:18614015 |
Free, Freely available | SCR_018165 | MitoCarta2.0 | 2026-09-12 01:02:18 | 208 | ||||||||
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Signaling Pathways Project Resource Report Resource Website 10+ mentions |
Signaling Pathways Project (RRID:SCR_018412) | SPP | data or information resource, database | Web multi omics knowledgebase based upon public, manually curated transcriptomic and cistromic datasets involving genetic and small molecule manipulations of cellular receptors, enzymes and transcription factors. Integrated omics knowledgebase for mammalian cellular signaling pathways. Web browser interface was designed to accommodate numerous routine data mining strategies. Datasets are biocurated versions of publically archived datasets and are formatted according to recommendations of the FORCE11 Joint Declaration on Data Citation Principles73, and are made available under Creative Commons CC 3.0 BY license. Original datasets are available. | Data integration, genetic database, gene regulatory network, cell signalling, cellular signalling network, transcriptomic data, manualy curated, cistromic data, cellular receptor, enzyme, transcrptomic factor, mammalian cellular signaling pathway, data mining strategy, dataset, , bio.tools |
is used by: Hypothesis Center is listed by: Debian is listed by: bio.tools works with: Gene Expression Omnibus (GEO) works with: NCBI Sequence Read Archive (SRA) |
CPRIT RP150578; Dan L. Duncan NCI Comprehensive Cancer Center at Baylor College of Medicine ; NCI CA125123; NHLBI HL127624; NIDDK DK095686; NIDDK DK097748; NIDDK DK097771; NIDDK DK105126; NIDDK DK107535; NIDDK DK48807; NIDDK DK56338 |
PMID:31672983 | Free, Freely available | r3d100013650, biotools:Signaling_Pathways_Project | https://bio.tools/Signaling_Pathways_Project, https://doi.org/10.17616/R31NJN0Y | https://www.signalingpathways.org | SCR_018412 | 2026-09-12 01:02:19 | 34 | ||||
|
Diabetes Prevention Type 1 Resource Report Resource Website |
Diabetes Prevention Type 1 (RRID:SCR_001467) | DPT-1 | biomaterial supply resource, material resource | Data set and biosepecimens of a multi-center clinical trial to determine if treatment with beta-cell antigens can delay the onset of Type 1 Diabetes Mellitus (Type 1 DM) in non-diabetic relatives of persons with Type 1 DM. Insulin is a well characterized antigen specifically produced by beta-cells, and it was used for this purpose in the initial DPT-1 studies. The protocol for high risk subjects uses daily subcutaneous insulin injections and an annual course of intravenous insulin treatment, while the protocol for intermediate risk subjects uses daily doses of insulin administered orally. Neither injected nor oral insulin at the doses used were observed to delay or prevent diabetes, although further studies are needed to test whether oral insulin can delay diabetes in people in the intermediate risk group with high titers of insulin autoantibodies. | beta cell antigen, insulin, prevention, onset, subcutaneous injection, oral, intravenous, treatment, randomized, controlled trial, drug therapy, delay |
is listed by: One Mind Biospecimen Bank Listing is listed by: ClinicalTrials.gov is listed by: NIDDK Information Network (dkNET) is listed by: Diabetes Research Centers |
Type 1 diabetes, Diabetes | NIDDK UC4 DK097835 | Free, Freely Available | nlx_152696 | https://www.niddkrepository.org/niddk/jsp/public/dataset.jsp#DPT-1 | SCR_001467 | Diabetes Prevention Trial--Type 1 (DPT-1) dataset, DPT-1 (The Diabetes Prevention Type 1) | 2026-09-12 01:02:26 | 0 | ||||
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University of Pennsylvania Center for Molecular Studies in Digestive and Liver Diseases Cell Culture Core Resource Report Resource Website |
University of Pennsylvania Center for Molecular Studies in Digestive and Liver Diseases Cell Culture Core (RRID:SCR_015621) | biomaterial supply resource, cell repository, material resource | Core facility that maintains a centralized repository of cells and reagents pertinent to digestive, liver and pancreatic disease research. It also provides training for labs in new cell culture (2D and 3D) techniques. | digestive disease, liver disease, pancreatic disease, cell repository, reagent, cell culture |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Pennsylvania Center for Molecular Studies in Digestive and Liver Diseases is organization facet of: University of Pennsylvania Center for Molecular Studies in Digestive and Liver Diseases |
digestive disease, liver disease, pancreatic disease | NIDDK P30 DK050306 | Available to the research community | SCR_015621 | 2026-09-12 01:01:03 | 0 | ||||||||
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Assessment Serial Evaluation and Subsequent Sequelae in Acute Kidney Injury (ASSESS-AKI) Resource Report Resource Website |
Assessment Serial Evaluation and Subsequent Sequelae in Acute Kidney Injury (ASSESS-AKI) (RRID:SCR_014386) | ASSESS-AKI | data or information resource, data set, resource | A study which recruits patients with and without an episode of acute kidney injury during a hospitalization, and follows them longitudinally for major cardiac, renal and mortality events. An important aspect of the study is the prospective evaluation of potential biomarkers for renal and cardiac outcomes. | study, acute kidney injury, longitudinal, major cardiac event, major renal event, major mortality event, biomarker |
is listed by: NIDDK Research Resources is listed by: NIDDK Information Network (dkNET) |
NIDDK | Account required | http://www.niddk.nih.gov/research-funding/research-resources/Pages/default.aspx | SCR_014386 | Assessment Serial Evaluation and Subsequent Sequelae in Acute Kidney Injury | 2026-09-12 01:01:02 | 0 | ||||||
|
UCSF Liver Center Resource Report Resource Website 1+ mentions |
UCSF Liver Center (RRID:SCR_015595) | data or information resource, organization portal, portal | Center whose goal is to integrate bench science with clinical investigation, in support of its vision to understand and cure human liver diseases. | UCSF, liver, liver disease |
is listed by: NIDDK Information Network (dkNET) is parent organization of: UCSF Liver Center Cell Biology Core is parent organization of: UCSF Liver Center Clinical & Translational Core is parent organization of: UCSF Liver Center Immunology Core is parent organization of: UCSF Liver Center Pathology & Imaging Core has organization facet: UCSF Liver Center Cell Biology Core has organization facet: UCSF Liver Center Clinical & Translational Core has organization facet: UCSF Liver Center Immunology Core has organization facet: UCSF Liver Center Pathology & Imaging Core is organization facet of: Digestive Disease Centers |
liver disease | NIDDK P30 DK026743 | Available to the research community | SCR_015595 | 2026-09-12 01:01:03 | 2 | ||||||||
|
Vitamin D to Prevent Type 2 Diabetes (D2d) Resource Report Resource Website 1+ mentions |
Vitamin D to Prevent Type 2 Diabetes (D2d) (RRID:SCR_014382) | D2d | data or information resource, data set, resource | A study to determine whether vitamin D supplementation is safe and effective in delaying the onset of type 2 diabetes in people at risk for the disease and to gain a better understanding of how vitamin D affects glucose metabolism. | diabetes, vitamin d, supplement, prevention, glucose metabolism |
is listed by: NIDDK Research Resources is listed by: NIDDK Information Network (dkNET) |
Type 2 diabetes | NIDDK | Study is ongoing | http://www.niddk.nih.gov/research-funding/research-resources/Pages/default.aspx | SCR_014382 | Vitamin D to Prevent Type 2 Diabetes | 2026-09-12 01:01:02 | 1 | |||||
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UCSF Liver Center Cell Biology Core Resource Report Resource Website |
UCSF Liver Center Cell Biology Core (RRID:SCR_015600) | biomaterial supply resource, cell repository, material resource | Core whose purpose is providing primary and immortalized liver cells for experimental use as well as other material such as human liver cells, primary hepatocytes, and immortalized cell lines. | cell biology, cell lines, liver cells, hypatocyte |
is listed by: NIDDK Information Network (dkNET) has parent organization: UCSF Liver Center is organization facet of: UCSF Liver Center |
liver disease | NIDDK P30 DK026743 | Available to the research community | SCR_015600 | 2026-09-12 01:01:03 | 0 | ||||||||
|
University of Chicago Digestive Diseases Research Core Center Integrated Translational Research Core Resource Report Resource Website |
University of Chicago Digestive Diseases Research Core Center Integrated Translational Research Core (RRID:SCR_015606) | biomaterial supply resource, cell repository, material resource | Core that serves as both a central repository for all the samples and data shared by the other cores and a catalyst for interdisciplinary research. | integrated translational research, communication, digestive disease research |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Chicago Digestive Diseases Research Core Center is organization facet of: University of Chicago Digestive Diseases Research Core Center |
digestive disease | NIDDK P30 DK042086 | Available to the research community | SCR_015606 | 2026-09-12 01:01:03 | 0 | ||||||||
|
AccuCor Resource Report Resource Website 10+ mentions |
AccuCor (RRID:SCR_023046) | data processing software, software application, software resource | Software as isotope natural abundance correction algorithm that is needed especially for high resolution mass spectrometers. Natural abundance correction of mass spectrometer data. | Natural abundance correction, mass spectrometer data, isotope natural abundance correction algorithm, high resolution mass spectrometers | NCI CA211437; NCI R01 CA163591; NIDDK P30DK019525; U. S. Department of Energy |
PMID:28471646 | Free, Available for download, Freely available | https://github.com/XiaoyangSu/AccuCor | SCR_023046 | 2026-09-12 01:01:12 | 27 | ||||||||
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Secrepedia Resource Report Resource Website |
Secrepedia (RRID:SCR_022590) | data or information resource, database, portal, project portal | Encyclopedia of white and brown adipocyte secretome in mouse models and humans as key prerequisite to elucidating role of these mediators in normal physiology and disease. | Encyclopedia, white and brown adipocyte secretome, mouse models and humans, normal physiology and disease | is listed by: NIDDK Information Network (dkNET) | type 2 diabetes, Diabetes, obesity | NIDDK | Free, Freely available | SCR_022590 | 2026-09-12 01:01:11 | 0 | ||||||||
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eXpression2Kinases Resource Report Resource Website 1+ mentions |
eXpression2Kinases (RRID:SCR_016307) | X2K | software application, software resource | Software tool to produce inferred networks of transcription factors, proteins, and kinases predicted to regulate the expression of the inputted gene list by combining transcription factor enrichment analysis, protein-protein interaction network expansion, with kinase enrichment analysis. It provides the results as tables and interactive vector graphic figures. | inferred, network, transcription, factor, protein, kinase, regulate, expression, gene, analysis, combine, bio.tools |
is listed by: Debian is listed by: bio.tools |
NCRR KL2 RR029885; NIDDK P01 DK056492; NIDDK R01 DK088541; NIDDK RC4DK090860; NIGMS P50 GM071558; NLM RC2 LM010994 |
PMID:22080467 | Open source, Free, Freely available, Available for download | biotools:x2k | https://bio.tools/x2k, http://www.maayanlab.net/X2K/ | SCR_016307 | eXpression2Kinases, X2K | 2026-09-12 01:02:53 | 6 | ||||
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MOPED - Model Organism Protein Expression Database Resource Report Resource Website 1+ mentions |
MOPED - Model Organism Protein Expression Database (RRID:SCR_006065) | MOPED | analysis service resource, data analysis service, data or information resource, database, production service resource, resource, service resource | An expanding multi-omics resource that enables rapid browsing of gene and protein expression information from publicly available studies on humans and model organisms. MOPED also serves the greater research community by enabling users to visualize their own expression data, compare it with existing studies, and share it with others via private accounts. MOPED uniquely provides gene and protein level expression data, meta-analysis capabilities and quantitative data from standardized analysis utilizing SPIRE (Systematic Protein Investigative Research Environment). Data can be queried for specific genes and proteins; browsed based on organism, tissue, localization and condition; and sorted by false discovery rate and expression. MOPED links to various gene, protein, and pathway databases, including GeneCards, Entrez, UniProt, KEGG and Reactome. The current version of MOPED (MOPED 2.5) The current version of MOPED (MOPED 2.5, 2014) contains approximately 5 million total records including ~260 experiments and ~390 conditions. | protein expression, gene expression, model organism, gene, protein, pathway, proteomics, transcriptomics, data visualization, overlap plot, heatmap, dot plot, data sharing, protein localization, gene localization |
is related to: GeneCards is related to: UniProt is related to: KEGG is related to: Reactome |
Robert B McMillen Foundation ; NSF DBI0544757; NIGMS 5R01GM076680; NIDDK UO1DK072473; NIDDK 1U01DK089571 |
PMID:24350770 PMID:22139914 |
nlx_151470 | SCR_006065 | Multi-Omics Profiling Expression Database | 2026-09-12 01:00:11 | 2 | ||||||
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Indiana University Cooperative Center of Excellence in Hematology Resource Report Resource Website |
Indiana University Cooperative Center of Excellence in Hematology (RRID:SCR_015343) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Research center for hematology research. It provides services through four scientific core facilities: the Experimental Mouse Resources Core, the Optical Microscopy Services Core, the Angiogenesis Core, and the Flow Cytometry Core in addition to the Enrichment Program of the Center. | hematology research, hematology research center, online portal, niddk |
is listed by: NIDDK Information Network (dkNET) has parent organization: Indiana University School of Medicine; Indiana; USA is parent organization of: Indiana University Cooperative Center of Excellence in Hematology Experimental Mouse Resources Core is parent organization of: Indiana University Cooperative Center of Excellence in Hematology Angiogenesis Core is parent organization of: Indiana University Cooperative Center of Excellence in Hematology Optical Microscopy Core has organization facet: Indiana University Cooperative Center of Excellence in Hematology Experimental Mouse Resources Core has organization facet: Indiana University Cooperative Center of Excellence in Hematology Optical Microscopy Core has organization facet: Indiana University Cooperative Center of Excellence in Hematology Angiogenesis Core has organization facet: Indiana University School of Medicine Flow Cytometry Core Facility is organization facet of: Hematology Centers |
NIDDK U54DK106846 | Available to the research community | SCR_015343 | 2026-09-12 01:00:17 | 0 | |||||||||
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Boston Children's Hospital Center of Excellence in Molecular Hematology Resource Report Resource Website |
Boston Children's Hospital Center of Excellence in Molecular Hematology (RRID:SCR_015348) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Research center investigating molecular hematology through mouse and zebrafish models. | hematology research, hematology research center, online portal |
is listed by: NIDDK Information Network (dkNET) is parent organization of: Boston Children's Hospital Center of Excellence in Molecular Hematology Zebrafish Core is parent organization of: Boston Children's Hospital Center of Excellence in Molecular Hematology Stem Cell Engineering and Analysis Core is parent organization of: Boston Children's Hospital Center of Excellence in Molecular Hematology Mouse Embryonic Stem(ES) Cell and Gene Targeting Core has organization facet: Boston Children's Hospital Center of Excellence in Molecular Hematology Mouse Embryonic Stem(ES) Cell and Gene Targeting Core has organization facet: Boston Children's Hospital Center of Excellence in Molecular Hematology Zebrafish Core has organization facet: Boston Children's Hospital Center of Excellence in Molecular Hematology Stem Cell Engineering and Analysis Core is organization facet of: Hematology Centers |
NIDDK U54DK110805 | Available to the research community | SCR_015348 | 2026-09-12 01:00:17 | 0 | |||||||||
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Columbia Diabetes Research Center Resource Report Resource Website |
Columbia Diabetes Research Center (RRID:SCR_015075) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Research center which provides research support for investigators pursuing research on diabetes and metabolic disorders. | metabolic disorders, diabetes research |
is listed by: NIDDK Information Network (dkNET) is affiliated with: Diabetes Research Centers is parent organization of: Columbia Diabetes Research Center Mouse Metabolic Function and Phenotyping Core Facility has organization facet: Columbia Diabetes Research Center Flow Cytometry and Cell Sorting Core Facility has organization facet: Columbia Diabetes Research Center Translational Biomarker Analytical Core Facility has organization facet: Columbia Diabetes Research Center Mouse Metabolic Function and Phenotyping Core Facility has organization facet: Columbia Diabetes Research Center Advanced Tissue Pathology and Imaging Core Facility is organization facet of: Diabetes Research Centers |
Diabetes | NIDDK P30DK063608 | Available to the research community | SCR_015075 | 2026-09-12 01:00:17 | 0 |
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