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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Microbiology and Quality Associates Resource Report Resource Website |
Microbiology and Quality Associates (RRID:SCR_012270) | MQA | commercial organization, service resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 22, 2024. Microbiology & Quality Associates, Inc., located in the San Francisco Bay Area, is a service organization providing a variety of services to life sciences companies. Our services include: contract biotech development services, testing services, consulting, validation services, calibration services, training, and scientific resources. MQA is FDA registered. Our Quality System comply with GXP regulations and ISO 17025/9001. We provide services to a wide variety of companies in biotechnology, pharmaceutical, medical devices, nutritional products, dialysis centers, semiconductors, and other industries. MQA staff has many years of hands-on experience at pharmaceutical, biotechnology and medical device companies. | is listed by: ScienceExchange | THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_11190 | SCR_012270 | Microbiology & Quality Associates Inc., Microbiology and Quality Associates Inc., Microbiology & Quality Associates | 2026-09-12 12:57:47 | 0 | ||||||||
|
Superfund basic research program Resource Report Resource Website 1+ mentions |
Superfund basic research program (RRID:SCR_012313) | SBRP, SF | government granting agency | http://www.niehs.nih.gov/research/supported/srp/funding/index.cfm | has parent organization: National Institutes of Health | nlx_inv_1005143 | SCR_012313 | 2026-09-12 12:57:47 | 1 | ||||||||||
|
University of Massachusetts Amherst Labs and Facilities Resource Report Resource Website |
University of Massachusetts Amherst Labs and Facilities (RRID:SCR_012315) | UMass Amherst Labs and Facilities, UMass Amherst Labs & Facilities | access service resource, core facility, service resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented in August 16,2024. Portal, Core facility |
is listed by: ScienceExchange is related to: UMass Amherst Laboratory of Medical Zoology has parent organization: University of Massachusetts Amherst; Massachusetts; USA is parent organization of: IALS Core Facilities |
THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_1165 | SCR_012315 | University of Massachusetts Amherst Labs & Facilities | 2026-09-12 12:57:47 | 0 | ||||||||
|
PrimBio Research Institute LLC Resource Report Resource Website |
PrimBio Research Institute LLC (RRID:SCR_012318) | service resource | PrimBio Research Institute uses the Ion Torrent gene sequencing platform to provide genomic sequencing services. We are also researching and developing targeted gene panels for diseases diagnosis, prevention and treatment. Provides customized analysis. | is listed by: ScienceExchange | SciEx_11901 | http://www.scienceexchange.com/facilities/primbio-research-institute-llc | SCR_012318 | PrimBio Research, PrimBio Research Institute | 2026-09-12 12:57:47 | 0 | |||||||||
|
Fountainbridge Resource Report Resource Website |
Fountainbridge (RRID:SCR_012317) | Fountainbridge | access service resource, commercial organization, core facility, service resource | Fountainbridge is a chemical company that helps its customers to acheive the maximum level of success when purchasing chemicals from China. Our services are provided by Fountainbridge''s expert staff based in China and Europe and through close relationship with our partners based in China. Our aim is to give our customers direct access to services and products provided from China, allowing them to reduce costs, increase security and decrease the time it takes to bring chemicals to market. | is listed by: ScienceExchange | SciEx_11651 | SCR_012317 | Fountainbridge Ltd | 2026-09-12 12:57:47 | 0 | |||||||||
|
CSISP Bioinformatics and Biostatistics Resource Report Resource Website |
CSISP Bioinformatics and Biostatistics (RRID:SCR_012287) | CSISP Bioinformatics & Biostatistics | access service resource, availability annotation standard, core facility, data or information resource, narrative resource, nif annotation standard, service resource, standard specification, this resource is no longer in service | THIS RESOURCE IS NO LONGER IN SERVCE, documented January 24, 2019. Core provides advisory services in study planning and data mining (debugging, analysis and interpretation of results) resulting from the sequencing of DNA and RNA. Core's goal is to help extract all possible information from sequencing data which will be useful for projects. Applications: Sequence trimming and quality control (quality index, length of sequences, etc...). Taxonomic assignment of prokaryotic 16S rDNA sequences. Comparative ecological analysis of environmental and/or clinical microbial communities based on 16S rDNA taxonomy. Assembly and/or annotation of genomes and metagenomes. Transcriptome annotation. Determination of SNPs in resequencing studies in bacterial systems. Sending Data. Sequences can be submitted in any of the usual formats (FASTA, SFF, FASTQ, etc) along with a description of the experimental design (including sufficient details) and the relevant information associated with each sample in order to perform the necessary analyses (factors associated with the samples, sub-samples, etc.). | bioinformatic, biostatistic, metagenome, resequencing, Transcriptome annotation, Assembly of genome, annotation of genome, |
is listed by: ScienceExchange is related to: Center for Public Health Research Labs and Facilities |
THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_11417 | SCR_012287 | , Biostatistics, Centro Superior de Investigacion en Salud Publica, Center for Public Health Research, Bioinformatics | 2026-09-12 12:57:47 | 0 | |||||||
|
Firefly BioWorks Resource Report Resource Website 1+ mentions |
Firefly BioWorks (RRID:SCR_012320) | Firefly BioWorks | access service resource, commercial organization, core facility, service resource | Firefly BioWorks, Inc. (Cambridge, MA) provides FirePlex????????????? miRSelect, a platform for targeted microRNA profiling of diverse biological samples. The FirePlex????????????? advantage lies in its streamlined, high-throughput protocol, affordable customization, and low capital cost. FirePlex????????????? readout is performed on standard flow cytometers, and FirePlex????????????? is offered as a service for users with limited access to flow instruments. | is listed by: ScienceExchange | SciEx_11675 | SCR_012320 | Firefly BioWorks Inc. | 2026-09-12 12:57:47 | 4 | |||||||||
|
University of Oklahoma Labs and Facilities Resource Report Resource Website |
University of Oklahoma Labs and Facilities (RRID:SCR_012282) | OU Labs and Facilities, OU Labs & Facilities | access service resource, core facility, service resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on April 16,2024. Portal, Core facility |
is listed by: ScienceExchange has parent organization: University of Oklahoma; Oklahoma; USA |
THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_1680 | SCR_012282 | University of Oklahoma Labs & Facilities | 2026-09-12 12:57:47 | 0 | ||||||||
|
EC2KEGG Resource Report Resource Website 1+ mentions |
EC2KEGG (RRID:SCR_012127) | software resource | A perl-based package to perform comparative analysis of metabolic pathways between two organisms. | standalone software, perl |
is listed by: OMICtools has parent organization: SourceForge |
PMID:25202338 | OMICS_05782 | SCR_012127 | 2026-09-12 12:57:46 | 8 | |||||||||
|
Gene By Gene Resource Report Resource Website 1+ mentions |
Gene By Gene (RRID:SCR_012248) | Gene By Gene | access service resource, commercial organization, core facility, service resource | Gene By Gene offers a full suite of genetic services, including clinical gene tests, exome sequencing, genome sequencing. In addition, the recent acquisition of bioinformatics experts, Arpeggi Inc., core also offers a full end-to-end solution for sequencing projects and bioinformatics. | sequencing, genome sequencing, clinical gene tests, exome sequencing | is listed by: ScienceExchange | Available to external user | SciEx_11019 | http://www.scienceexchange.com/facilities/gene-by-gene | SCR_012248 | , genebygene.com, genebygene | 2026-09-12 12:57:46 | 1 | ||||||
|
TorosGen Biotechnology Resource Report Resource Website |
TorosGen Biotechnology (RRID:SCR_012402) | TorosGen Biotechnology | commercial organization | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on April 22, 2024. | is listed by: ScienceExchange | THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_13052 | SCR_012402 | 2026-09-12 12:57:48 | 0 | |||||||||
|
cnvCapSeq Resource Report Resource Website 1+ mentions |
cnvCapSeq (RRID:SCR_012126) | software resource | Software for accurate and sensitive CNV discovery and genotyping in long-range targeted resequencing. | standalone software, java |
is listed by: OMICtools has parent organization: SourceForge |
PMID:25228465 | GNU Lesser General Public License | OMICS_05722 | SCR_012126 | 2026-09-12 12:57:46 | 2 | ||||||||
|
LaboSpace Resource Report Resource Website 1+ mentions |
LaboSpace (RRID:SCR_012404) | LaboSpace | access service resource, commercial organization, core facility, service resource | LaboSpace is a laboratory service provider with branches in UK and Italy operating in the area of Immunology, Cancer Research, Neuroscience, Cardiovascular Disease, Endocrinology and Target Therapy application. LaboSpace services for the research market cover IHC validation, Multiplex IHC, Luminex and Elisa assays platform, DNA/RNA large HTS extraction. In May 2011 LaboSpace was granted by the Local Government of the accreditation as Diagnostic laboratory. Currently applying for ISO9001:2008 and ISO13485 | is listed by: ScienceExchange | SciEx_13143 | SCR_012404 | LaboSpace UK Ltd. | 2026-09-12 12:57:48 | 2 | |||||||||
|
University of Kansas Labs and Facilities Resource Report Resource Website |
University of Kansas Labs and Facilities (RRID:SCR_012249) | KU Labs and Facilities, KU Labs & Facilities, KU | access service resource, core facility, service resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on April 16,2024. Portal and core facility. | Portal, core facility, protein production, magnetic resonance, graphics, modeling, |
is listed by: ScienceExchange is related to: University of Kansas Protein Production Group Core Facility is related to: University of Kansas Nuclear Magnetic Resonance Laboratory Core Facility is related to: University of Kansas Molecular Graphics and Modeling Laboratory Core Facility has parent organization: University of Kansas; Kansas; USA |
THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_1102 | SCR_012249 | Labs, University of Kansas, Facilities, UK | 2026-09-12 12:57:46 | 0 | |||||||
|
ProGen - Protein and Gene Engineering Resource Report Resource Website 10+ mentions |
ProGen - Protein and Gene Engineering (RRID:SCR_012405) | ProGen | commercial organization, service resource | ProGen - Protein & Gene Engineering specializes in custom molecular biology services including DNA cloning, sub-cloning, codon optimized artificial gene synthesis, site-directed mutagenesis and large scale custom projects such as DNA isolation and purification. The custom products of the company are used for gene engineering to study gene expression regulatory mechanisms, protein engineering, and analysis of gene and protein function. Customers of the company include research laboratories in academia, clinical researchers in medical institutes and biotechnology companies. In addition to our custom cloning services, as an authorized Israeli representative of SBS Genetech Co., we market molecular biology products of SBS at competitive prices. SBS is one of the largest sources of synthetic oligonucleotides. The range of the products cover biochemicals, enzymes and PCR products. As a young company we are highly motivated to deliver high quality services and products at lowest prices with a rapid schedule of delivery. We guarantee full customer satisfaction on all products and services. | is listed by: ScienceExchange | SciEx_13072 | http://www.scienceexchange.com/facilities/progen-protein-gene-engineering | SCR_012405 | ProGen - Protein & Gene Engineering | 2026-09-12 12:57:48 | 45 | ||||||||
|
Ohio Peptide Resource Report Resource Website |
Ohio Peptide (RRID:SCR_012407) | commercial organization, service resource | We provide custom synthesis of peptides and peptide conjugates. | is listed by: ScienceExchange | SciEx_13079 | http://www.scienceexchange.com/facilities/ohio-peptide-llc | SCR_012407 | Ohio Peptide LLC | 2026-09-12 12:57:48 | 0 | |||||||||
|
eALPS Resource Report Resource Website |
eALPS (RRID:SCR_012130) | software resource | Software that uses the genotype data in conjunction with the pooled sequence data in order to accurately estimate the proportions of the samples in the pool, even in cases where not all individuals in the pool were genotyped (eALPS-LD). | standalone software |
is listed by: OMICtools has parent organization: SourceForge |
PMID:24144111 | OMICS_05833 | SCR_012130 | 2026-09-12 12:57:46 | 0 | |||||||||
|
Microtech Lab Resource Report Resource Website |
Microtech Lab (RRID:SCR_012371) | Microtech Lab | commercial organization, service resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 22, 2023. Microtech Lab is a laboratory open to all researchers involved in the development of genomics projects of basic, translational, and clinical research. Our lab provides the support and tools for microarray experiments for the following applications: 1) Analysis of gene expression profiles 2) Analysis of the expression profiles of microRNA (miRNA) | is listed by: ScienceExchange | THIS RESOURCE IS NO LONGER IN SERVICE | SciEx_12160 | SCR_012371 | 2026-09-12 12:57:47 | 0 | |||||||||
|
PLEK Resource Report Resource Website 100+ mentions |
PLEK (RRID:SCR_012132) | software resource | An alignment-free software tool which uses a computational pipeline based on an improved k-mer scheme and a support vector machine (SVM) algorithm to distinguish lncRNAs from messenger RNAs (mRNAs), in the absence of genomic sequences or annotations. It is especially suitable for PacBio or 454 sequencing data and large-scale transcriptome data. | standalone software, roche, pacific biosciences, unix/linux, c, python, bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools has parent organization: SourceForge |
PMID:25239089 | GNU General Public License | biotools:plek, OMICS_05839 | https://bio.tools/plek | SCR_012132 | PLEK: predictor of long non-coding RNAs and messenger RNAs based on an improved k-mer scheme | 2026-09-12 12:57:46 | 134 | ||||||
|
LDx Resource Report Resource Website |
LDx (RRID:SCR_012131) | software resource | A computational software tool for estimating linkage disequilibrium (LD) from pooled resequencing data. | standalone software |
is listed by: OMICtools has parent organization: SourceForge |
PMID:23152785 | OMICS_05834 | SCR_012131 | 2026-09-12 12:57:46 | 0 |
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