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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | ||||||||||||||
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CARDinal Plane VIEWing System Resource Report Resource Website 1+ mentions |
CARDinal Plane VIEWing System (RRID:SCR_013422) | data processing software, image processing software, software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on June 1, 2023. Cardviews is a CARDinal plane VIEWing System developed at the Center for Morphometric Analysis at the Massachusetts General Hospital. It is a tool for brain morphometry (including volumetric analysis using xvol) and this program emerged as a product of our methodological development. While some of its functionality is specifically tailored for our general segmentation and neocortical parcellation routines, the imaging interface, segmentation tools, and localization capacity have utility extending beyond the specific aims motivating its initial conception. : | has parent organization: Harvard Medical School; Massachusetts; USA | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-00278 | SCR_013422 | SciCrunch Registry | Cardviews | 2026-10-10 12:39:08 | 1 | |||||||||
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MP Biomedicals Resource Report Resource Website 10000+ mentions |
MP Biomedicals (RRID:SCR_013308) | antibody supplier, commercial organization, material resource, reagent supplier | An Antibody supplier | nlx_152415 | SCR_013308 | SciCrunch Registry | 2026-10-10 12:39:13 | 21615 | ||||||||||||
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PiGenome Resource Report Resource Website |
PiGenome (RRID:SCR_013394) | PiGenome | analysis service resource, data analysis service, data or information resource, database, production service resource, service resource | Database for ESTs (Expressed Sequence Tags), consensus sequences, bacterial artificial chromosome (BAC) clones, BES (BAC End Sequences). They have generated 69,545 ESTs from 6 full-length cDNA libraries (Porcine Abdominal Fat, Porcine Fat Cell, Porcine Loin Muscle, Liver and Pituitary gland). They have also identified a total of 182 BAC contigs from chromosome 6. It is very valuable resources to study porcine quantitative trait loci (QTL) mapping and genome study. Users can explore genomic alignment of various data types, including expressed sequence tags (ESTs), consensus sequences, singletons, QTL, Marker, UniGene and BAC clones by several options. To estimate the genomic location of sequence dataset, their data aligned BES (BAC End Sequences) instead of genomic sequence because Pig Genome has low-coverage sequencing data. Sus scrofa Genome Database mainly provide comparative map of four species (pig, cattle, dog and mouse) in chromosome 6. | gene expression, genome, sequence, gene, expressed sequence tag, consensus sequence, bac clone, bac end sequence, bac contig, quantitative trait loci, singleton, marker, unigene, chromosome 6, blast, transcript, bacterial artificial chromosome, snp, alignment |
is related to: Gene Ontology has parent organization: National Institute of Animal Science; Gyeonggi-do; South Korea |
National Institute of Animal Science; Gyeonggi-do; Korea ; Korean Rural Development Administration ; Biogreen21 Project 20050301034467 |
PMID:19082661 | nlx_153888 | http://pigenome.nabc.go.kr/ | SCR_013394 | SciCrunch Registry | Sus scrofa Genome database, Pig Genome Database, Pigenome database | 2026-10-10 12:39:27 | 0 | |||||
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Bender MedSystems Resource Report Resource Website 50+ mentions |
Bender MedSystems (RRID:SCR_013310) | antibody supplier, commercial organization, material resource, reagent supplier |
THIS RESOURCE IS NO LONGER IN SERVICE. Documented September 15, 2017.\\\\\\ \\\\\\ An Antibody supplier. |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_152294 | SCR_013310 | SciCrunch Registry | 2026-10-10 12:39:01 | 70 | |||||||||||
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MABTECH Resource Report Resource Website 1000+ mentions |
MABTECH (RRID:SCR_013398) | commercial organization | An Antibody supplier | nlx_152403, grid.452552.1 | https://ror.org/057s3rs39 | SCR_013398 | SciCrunch Registry | Mabtech AB | 2026-10-10 12:39:14 | 3389 | ||||||||||
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DC Analysis programs Resource Report Resource Website 10+ mentions |
DC Analysis programs (RRID:SCR_013431) | software resource | These programs have been written over the last 20 years for analysis of our own results. They all do some things that are still not available in any commercial program. The programs are written in protected-mode 32-bit Fortran 90, with some assembler subroutines for fast graphics, and the Gino graphics library. Thus they are essentially DOS programs, though they are usually run from Windows, either via a desktop icon (the .ico files) or in the DOS box. The manuals (now in pdf format), have now all been collected into a single document, DCMANUALS.PDF, which should be downloaded, and the bits that you need can then be printed. Note that some sections are common to many or all programs, e.g. the notes on the graph and histogram drawing subroutines, and it is important to read this before using any of the programs (though there is a lot of online help (hit F1) for the graphics, and also in SCAN. Sponsor. Our work was supported by the Wellcome Trust (project grant 074491) and the Medical Research Council (programme grant G0400869). | has parent organization: University College London; London; United Kingdom | nif-0000-30411 | SCR_013431 | SciCrunch Registry | DOS | 2026-10-10 12:39:14 | 14 | ||||||||||
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Dali Server Resource Report Resource Website 500+ mentions |
Dali Server (RRID:SCR_013433) | analysis service resource, data analysis service, production service resource, service resource, software resource | Network service for comparing protein structures in 3D. You submit the coordinates of a query protein structure and Dali compares them against those in the Protein Data Bank (PDB). You receive an email notification when the search has finished. In favourable cases, comparing 3D structures may reveal biologically interesting similarities that are not detectable by comparing sequences. Requests can also be submitted by e-mail to dali-server at helsinki dot fi. The body of the e-mail message must contain atomic coordinates in PDB format. If you want to know the structural neighbours of a protein already in the Protein Data Bank (PDB), you can find them in the Dali Database. If you want to superimpose two particular structures, you can do it in the pairwise DaliLite server. Academic users may download the DaliLite program for local use. | Protein structure comparison server, protein structure, comparison server, bio.tools, FASEB list |
is listed by: Debian is listed by: bio.tools has parent organization: University of Helsinki; Helsinki; Finland |
PMID:20457744 | Free, Freely available | biotools:dali | https://bio.tools/dali | SCR_013433 | SciCrunch Registry | Dali | 2026-10-10 12:39:03 | 534 | ||||||
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Matreya LLC Resource Report Resource Website 10+ mentions |
Matreya LLC (RRID:SCR_013390) | antibody supplier, commercial organization, material resource, reagent supplier | An Antibody supplier | nlx_152404 | SCR_013390 | SciCrunch Registry | 2026-10-10 12:39:02 | 15 | ||||||||||||
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RosettaDock Resource Report Resource Website 100+ mentions |
RosettaDock (RRID:SCR_013393) | RosettaDock | software resource | Predicts the structure of a protein-protein complex from the individual structures of the monomer components. |
is listed by: OMICtools has parent organization: Johns Hopkins University; Maryland; USA |
OMICS_01604 | SCR_013393 | SciCrunch Registry | 2026-10-10 12:39:07 | 125 | ||||||||||
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Epitomics Resource Report Resource Website 1+ mentions |
Epitomics (RRID:SCR_013516) | Epitomics | antibody supplier, commercial organization, material resource, reagent supplier | Original provider of rabbit monoclonal antibodies. Important Note for Epitomics Customers in the U.S.: As of Jan. 28, 2013, orders for Epitomics products will now be handled directly by Abcam. | has parent organization: Abcam | nlx_152357 | SCR_013516 | SciCrunch Registry | 2026-10-10 12:39:15 | 9 | ||||||||||
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DsTool Resource Report Resource Website 1+ mentions |
DsTool (RRID:SCR_013483) | data processing software, data visualization software, simulation software, software application, software resource | Software package providing an interactive graphical interface for computations in dynamical systems and visualization of resulting geometric structures, designed for researchers and educators studying dynamical systems (both differential equations and discrete time systems). DsTool readily produces nice pictures for both discrete and continuous systems. | has parent organization: Cornell University; New York; USA | Public domain | nif-0000-00163 | SCR_013483 | SciCrunch Registry | DsTool | 2026-10-10 12:39:08 | 1 | |||||||||
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Immuno-Biological Laboratories Resource Report Resource Website 500+ mentions |
Immuno-Biological Laboratories (RRID:SCR_013485) | antibody supplier, commercial organization, material resource, reagent supplier | An Antibody supplier | nlx_152385 | SCR_013485 | SciCrunch Registry | Immuno-Biological Laboratories Co, IBL, Ltd. | 2026-10-10 12:39:14 | 507 | |||||||||||
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ImmunoDiagnostics Resource Report Resource Website 100+ mentions |
ImmunoDiagnostics (RRID:SCR_013484) | antibody supplier, commercial organization, material resource, reagent supplier | An Antibody supplier | nlx_152386 | SCR_013484 | SciCrunch Registry | ImmunoDiagnostics inc. | 2026-10-10 12:39:28 | 113 | |||||||||||
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Dualsystems Biotech AG Resource Report Resource Website 1+ mentions |
Dualsystems Biotech AG (RRID:SCR_013522) | antibody supplier, commercial organization, material resource, reagent supplier | An Antibody supplier | nlx_152348 | SCR_013522 | SciCrunch Registry | 2026-10-10 12:39:09 | 7 | ||||||||||||
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ENIGMA Resource Report Resource Website 100+ mentions |
ENIGMA (RRID:SCR_013400) | data analysis software, data processing software, software application, software resource | A software tool to extract gene expression modules from perturbational microarray data, based on the use of combinatorial statistics and graph-based clustering. The modules are further characterized by incorporating other data types, e.g. GO annotation, protein interactions and transcription factor binding information, and by suggesting regulators that might have an effect on the expression of (some of) the genes in the module. Version : ENIGMA 1.1 used GO annotation version : Aug 29th 2007 | genome, gene, genetic software, bio.tools |
is listed by: bio.tools is listed by: Debian has parent organization: Ghent University; Ghent; Belgium is parent organization of: ENIGMA-DTI Pipeline |
PMID:18402676 | biotools:enigma, nlx_144365 | https://bio.tools/enigma | SCR_013400 | SciCrunch Registry | 2026-10-10 12:39:02 | 133 | ||||||||
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Meridian Life Science Resource Report Resource Website |
Meridian Life Science (RRID:SCR_013369) | antibody supplier, commercial organization, material resource, reagent supplier | An Antibody supplier | nlx_152410 | SCR_013369 | SciCrunch Registry | Meridian Life Science inc. | 2026-10-10 12:39:14 | 0 | |||||||||||
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MabTag GmbH Resource Report Resource Website 10+ mentions |
MabTag GmbH (RRID:SCR_013405) | antibody supplier, commercial organization, material resource, reagent supplier | An Antibody supplier | nlx_152402 | SCR_013405 | SciCrunch Registry | MabTag | 2026-10-10 12:39:27 | 37 | |||||||||||
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Diagnostic Consulting Network Resource Report Resource Website |
Diagnostic Consulting Network (RRID:SCR_013525) | antibody supplier, commercial organization, material resource, reagent supplier | An Antibody supplier | nlx_152345 | SCR_013525 | SciCrunch Registry | Diagnostic Consulting Network (DCN) | 2026-10-10 12:39:15 | 0 | |||||||||||
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DSHB Resource Report Resource Website 5000+ mentions |
DSHB (RRID:SCR_013527) | institution | An antibody supplier which banks and distributes hybridomas and monoclonal antibodies for use in research. The bank includes antibodies against targets such as GFP, transcription factors, stem cells, and human. | antibody supplier, hybridoma, monoclonal, bank, developmental studies | is hosted by: University of Iowa; Iowa; USA | NICHD | Available to the research community, Acknowledgement requested | nlx_152343, grid.482683.3 | https://ror.org/006cer819 | SCR_013527 | SciCrunch Registry | Developmental Studies Hybridoma Bank, Developmental Studies Hybridoma Bank at the University of Iowa | 2026-10-10 12:39:09 | 5649 | ||||||
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Pairwise Conservation Scores - An Algorithm to Identify Conserved K-mers Resource Report Resource Website 1+ mentions |
Pairwise Conservation Scores - An Algorithm to Identify Conserved K-mers (RRID:SCR_013409) | PCS | software resource | A stand-alone package to identify and analyze conserved k-mers in pairwise alignment. This program shows high performance for identifying miRNA seed binding sites in 3''-UTRs. | perl, perl script, bio.tools |
is listed by: bio.tools is listed by: Debian has parent organization: Tsinghua University; Beijing; China |
biotools:pcs, nlx_33020 | https://bio.tools/pcs | http://bioinfo.au.tsinghua.edu.cn/member/~gujin/pcs/ | SCR_013409 | SciCrunch Registry | Pairwise Conservation Scores | 2026-10-10 12:39:03 | 3 |
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