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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
Interactive web application for drug screening data analysis. It includes comprehensive quality control statistics, dose-response curve fitting, and calculation of quantitative scoring parameters such as EC50, IC50, drug sensitivity score and AUC. Used to facilitate quality control, dose-response curve fitting, and data visualization.
Proper citation: Breeze web-tool (RRID:SCR_026646) Copy
http://ubibrowser.bio-it.cn/ubibrowser
Web application as resource of known and predicted human ubiquitin ligase substrate interaction network. E3-substrate interactions are derived from six data sources: mannual cruration, protein ortholog, protein domain, protein motif and network topology.Designed to explore predicted and reported E3-substrate interactions for query E3 or substrate, and ubiquitination sites for substrate protein.
Proper citation: Ubibrowser (RRID:SCR_026659) Copy
Varioskan LUX is modular, upgradable instrument that offers usability for range of applications. Reader for absorbance, fluorescence intensity, chemiluminescence, AlphaScreen, and time-resolved fluorescence.
Proper citation: Thermo Fisher: Varioskan LUX Multi-Mode Microplate Reader (RRID:SCR_026792) Copy
https://www.ncei.noaa.gov/erddap/index.html
Data server to download subsets of scientific datasets in common file formats and make graphs and maps. This particular ERDDAP installation has oceanographic data (for example, data from satellites and buoys).
Proper citation: ERDDAP (RRID:SCR_026784) Copy
https://login.scg.stanford.edu
High-performance computing facility. Its resources have been designed to support labs engaged in genetics and bioinformatics research, but are open to anyone on campus. The Stanford SCG Bioinformatics Cluster is optimized to support large memory, single-node threaded applications as well as applications and workflows that require many small files.
Proper citation: Stanford SCG Bioinformatics Cluster (RRID:SCR_026876) Copy
Sanofi-Aventis was the former name of the French multinational pharmaceutical and healthcare company Sanofi, now headquartered in Paris, France. Sanofi S.A. is global healthcare company focused on discovering, developing, and delivering medicines and vaccines.
Proper citation: Sanofi-Aventis (RRID:SCR_026909) Copy
System used for in vivo radiation therapy and imaging of in vivo radiation therapy and imaging, like mice and rats, in order to study tumor and normal tissue responses to radiation. It combines micro-CT imaging with conformal radiation delivery, allowing researchers to image small tumors and organs, then precisely deliver radiation therapy with sub-millimeter accuracy.
Proper citation: Xstrahl: Small Animal Radiation Research Platform (SARRP) system (RRID:SCR_026901) Copy
Bench-standing IHC/ISH stainer with three-tray system, with 3.5hour run times. Each tray functions independently, allowing on-demand access and enabling you to load slides as they become available. System accommodates up to 29 antibodies (with detection loaded) and allows for easy swapping of antibodies without interrupting ongoing staining processes.
Proper citation: Leica: BOND-MAX Fully Automated IHC and ISH Staining System (RRID:SCR_026887) Copy
http://my.clevelandclinic.org/
Cleveland Clinic is renowned for its advancements in cardiac care, including pioneering coronary artery bypass surgery, and its focus on research and education. It's also known for its strong performance in numerous other specialties, including neurosurgery, gastroenterology, and oncology
Proper citation: Cleveland Clinic (RRID:SCR_026850) Copy
24 channels microscope for incubator with automated remote monitoring of cell cultures. 24 independent cameras are used to acquire brightfield or darkfield scans and perform image analysis of up to 24 wells of cell culture in parallel automatically. Culture quality and data can be checked from PC. It enables real-time, non-invasive, label-free monitoring of cell growth directly inside standard incubators. The system captures time-lapse images and performs automated quantitative analysis, generating dynamic growth curves and detailed cellular behavior profiles.
Proper citation: ZenCELL owl: live cell imaging and analysis system (RRID:SCR_026851) Copy
Rush University Medical Center is academic medical center for basic and clinical research, with physicians and scientists involved in hundreds of research projects developing and testing the effectiveness and safety of new therapies and medical devices. Offers residency and fellowship programs in medical and surgical specialties and subspecialties.
Proper citation: Rush University Medical Center (RRID:SCR_026857) Copy
https://www.revvity.com/gb-en/product/labchip-gx-touch-24-cls138162
Automated microfluidic electrophoresis system that rapidly quantifies and sizes DNA and RNA with high sensitivity using minimal sample volume.
Proper citation: Revvity: LabChip GX Touch Nucleic Acid Analyzer (RRID:SCR_026830) Copy
Digital microscope, combining high-resolution imaging with analysis. Whether running fluorescence imaging or brightfield assays, automated imager features comprehensive preconfigured protocols for cell-based assays to shorten learning curve.
Proper citation: Molecular Devices: ImageXpress Pico Automated Cell Imaging System (RRID:SCR_026831) Copy
https://d3pcsg2wjq9izr.cloudfront.net/files/8968/download/1005512/39-1846510061.pdf
Fully-automated, widefield cell imaging system. Building on capabilities of earlier IN Cell Analyzer systems, it provides platform to deliver advances in speed, image quality, and throughput. Allows to perform analysis.
Proper citation: Cytiva: IN Cell 2500HS (RRID:SCR_026891) Copy
https://www.covaris.com/le220-plus-focused-ultrasonicator-500569
Ultrasonicator is scalable, automated high-performance sample preparation instrument with automated water works to optimize user-to-user reproducibility and remote set-up and scheduling. Designed for integration with high-throughput laboratory automation. Includes integrated AFA ultraCUBE water chiller and water conditioning module.
Proper citation: Covaris: LE220-plus Focused-ultrasonicator (RRID:SCR_026895) Copy
Immunohistochemistry stainer is united with software and connectivity options. Can process 48 slides in less than three hours.
Proper citation: Agilent: Dako Autostainer Link 48 (RRID:SCR_026889) Copy
https://www.bruker.com/en/products-and-solutions/mass-spectrometry/timstof/timstof-flex.html
The timsTOF fleX is fully functional high speed, high sensitivity ElectroSpray Ionization (ESI) instrument for all Omics analyses with integrated Matrix-Assisted Laser Desorption Ionization (MALDI) source for fast MALDI Imaging.
Proper citation: Bruker: timsTOF fleX (RRID:SCR_026925) Copy
Biotechnology company in San Diego, California. Provides life scientists with innovative research reagents including immunity and cell culture products.
Proper citation: InvivoGen (RRID:SCR_026997) Copy
Web platform that integrates multiple programming language environments and enables data processing, data analysis, and machine learning through visual interface.
Proper citation: DecisionLinnc Data Science Platform (RRID:SCR_026971) Copy
https://www.bruker.com/en/products-and-solutions/mass-spectrometry/lc-ms/nanoelute-2.html
High-performance nanoflow liquid chromatography system with intuitive and flexible user interface, covering broad range of applications from single cell to high throughput routine proteomics.
Proper citation: Bruker: nanoElute 2 (RRID:SCR_026972) Copy
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