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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | ||||||||||||||
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University of Texas MD Anderson Cancer Center Resource Report Resource Website 500+ mentions |
University of Texas MD Anderson Cancer Center (RRID:SCR_004699) | MD Anderson Cancer Center | institution | The mission of The University of Texas MD Anderson Cancer Center is to eliminate cancer in Texas, the nation, and the world through outstanding programs that integrate patient care, research and prevention, and through education for undergraduate and graduate students, trainees, professionals, employees and the public. VISION: We shall be the premier cancer center in the world, based on the excellence of our people, our research-driven patient care and our science. We are Making Cancer History. |
is related to: National Chimpanzee Brain Resource has parent organization: University of Texas System; Texas; USA is parent organization of: MD Anderson Clone Bank is parent organization of: MD Anderson Pancreas Tissue Bank is parent organization of: MD Anderson Gynecologic Cancer Tissue Bank is parent organization of: VirusSeq is parent organization of: SpliceSeq is parent organization of: Chimpanzee Biomedical Research Resource is parent organization of: Owl Monkey Breeding and Research Resource is parent organization of: Squirrel Monkey Breeding and Research Resource is parent organization of: DupRecover is parent organization of: targetHub is parent organization of: Rhesus Monkey Breeding and Research is parent organization of: FamSeq is parent organization of: TAD is parent organization of: BreakFusion is parent organization of: RPPA Core Facility is parent organization of: University of Texas MD Anderson Cancer Center Advanced Microscopy Core Facility is parent organization of: University of Texas MD Anderson Functional Genomics Core Facility is parent organization of: University of Texas MD Anderson Research Histology Core Facility is parent organization of: University of Texas MD Anderson Cancer Center Small Animal Imaging Facility is parent organization of: A3D3a MVP is parent organization of: University of Texas MD Anderson Cancer Center Mass Spectrometry Imaging Core Facility |
Crossref funder ID: 100007313, nif-0000-24365, SCR_008276, nlx_69261, Wikidata: Q1525831, ISNI: 0000 0001 2291 4776, grid.240145.6 | https://ror.org/04twxam07 | SCR_004699 | SciCrunch Registry | UT M.D. Anderson Cancer Center, M.D. Anderson Cancer Center, UT MD Anderson Cancer Center | 2026-09-26 02:19:47 | 949 | ||||||||
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Gene Ontology Browsing Utility (GOBU) Resource Report Resource Website |
Gene Ontology Browsing Utility (GOBU) (RRID:SCR_005662) | GOBU | software resource, source code | Gene Ontology Browsing Utility (GOBU) (GOBU) is a Java-based software program for integrating biological annotation catalogs under an extendable software architecture. Users may interact with the Gene Ontology and user-defined hierarchy data of genes, and then use its plugins to (and not limited to) (1) browse the GO hierarchy with user defined data, (2) browse GO-oriented expression levels in the user data, (3) compute GO enrichment, and/or (4) customize data reporting. A set of classes and utility functions has been established so that a customized program can be made as a plugin or a command-line tool that programmically manipulate the Gene Ontology and specified user data. See the source code repository for examples. Reference Lin WD, Chen YC, Ho JM, Hsiao CD. GOBU: Toward an Integration Interface for Biological Objects. Journal of Information Science and Engineering. 2006 22(1):19-29. Platform: Windows compatible, Mac OS X compatible, Linux compatible, Unix compatible | annotation, gene, browser, computation, visualization, software library, statistical analysis, term enrichment, ontology or annotation browser, ontology or annotation visualization |
is listed by: Gene Ontology Tools is related to: Gene Ontology has parent organization: Academia Sinica; Taipei; Taiwan |
Open unspecified license - Free for academic use | nlx_149098 | SCR_005662 | SciCrunch Registry | Gene Ontology Browsing Utility | 2026-09-26 02:19:48 | 0 | |||||||
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Maryland Genetics of Interstitial Cystitis Resource Report Resource Website |
Maryland Genetics of Interstitial Cystitis (RRID:SCR_006992) | MaGIC | clinical trial, resource | Clinical study that investigated several hundred families with two or more blood relatives with interstitial cystitis in order to understand the molecular genetic basis of this condition. The study sought to find changes in genes that are found far more commonly in family members who have interstitial cystitis than in those who do not have the disease. Identifying these genes should lead to a better understanding of the cause of interstitial cystitis. This is a national study which is conducted by telephone and mail, and in which participants could participate entirely from their home. | male, female, adolescent, adult human, genetics, risk factor, family history, bladder, pain, observational |
is related to: NIDDK Information Network (dkNET) has parent organization: ClinicalTrials.gov has parent organization: University of Maryland School of Medicine; Maryland; USA |
Interstitial cystitis | NIDDK | nlx_152843 | http://icresearch.umaryland.edu/magic.aspx | SCR_006992 | SciCrunch Registry | Maryland Genetics of Interstitial Cystitis (MaGIC) | 2026-09-26 02:19:49 | 0 | |||||
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University of Delaware Skate Genome Project Resource Report Resource Website 1+ mentions |
University of Delaware Skate Genome Project (RRID:SCR_005300) | Skate Genome Project | access service resource, core facility, service resource | Core facility provides a model for collaborative approaches to use specialized resources and expertise in an integrated process. Core builds on the expertise and resources provided by the Bioinformatics Cores of the five northeastern states that form NECC. The Skate Genome Annotation Workshops and Jamborees offer training and opportunities for faculty and students to work with and annotate genome sequences. Workshops include lectures, tutorials and exercises annotating the genome of the little skate, Leucoraja erinacea. | skate, genome, genomics, bioinformatics, sequencing, annotate, sequence, workshop |
has parent organization: North East Cyberinfrastructure Consortium has parent organization: University of Delaware; Delaware; USA is parent organization of: SkateBase |
Available to external user | nlx_144349 | SCR_005300 | SciCrunch Registry | , University of Delaware, Genome Project, Skate | 2026-09-26 02:19:48 | 1 | |||||||
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Sol Genomics Network - Bulk download Resource Report Resource Website |
Sol Genomics Network - Bulk download (RRID:SCR_007161) | data or information resource, data set | Allows users to download Unigene or BAC information using a list of identifiers or complete datasets with FTP., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | database, dataset, unigene, gene, bac, genomics, clone, array spot, unigene id, bac ends |
is related to: SGN has parent organization: Boyce Thompson Institute for Plant Research |
NSF 0820612; USDA CSREES |
THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-30227 | SCR_007161 | SciCrunch Registry | SGN bulk download | 2026-09-26 02:19:49 | 0 | |||||||
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University of Notre Dame; Indiana; USA Resource Report Resource Website 1+ mentions |
University of Notre Dame; Indiana; USA (RRID:SCR_006191) | institution, university |
is parent organization of: VectorBase is parent organization of: %MinMax is parent organization of: University of Notre Dame Integrated Imaging Core Facility is parent organization of: University of Notre Dame ND Biophysics Instrumentation Core Facility is parent organization of: Notre Dame Genomics and Bioinformatics Core Facility is parent organization of: Notre Dame Freimann Life Science Center Core Facility is parent organization of: University of Notre Dame Keck Center for Transgene Research Core Facility is parent organization of: Notre Dame University Magnetic Resonance Research Center Core Facility is parent organization of: Notre Dame University Mass Spectrometry and Proteomics Core Facility |
SCR_006191 | SciCrunch Registry | ND | 2026-09-26 02:19:48 | 7 | ||||||||||||
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BamView Resource Report Resource Website 10+ mentions |
BamView (RRID:SCR_004207) | BamView | software resource, source code | A free interactive display of read alignments in BAM data files that can be launched with Java Web Start or downloaded. This interactive Java application for visualizing the large amounts of data stored for sequence reads which are aligned against a reference genome sequence can be used in a number of contexts including SNP calling and structural annotation. It has been integrated into Artemis so that the reads can be viewed in the context of the nucleotide sequence and genomic features. The source code is available as part of the Artemis code which can be downloaded from GitHub. | bam, next-generation sequencing, java, snp calling, structural annotation, macosx, unix, windows, visualize, analyze, sequence read, reference sequence, single nucleotide polymorphism, bio.tools |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian has parent organization: SourceForge has parent organization: Wellcome Trust Sanger Institute; Hinxton; United Kingdom |
PMID:22253280 PMID:20071372 |
GNU General Public License | biotools:bamview, OMICS_00878, nlx_22933 | https://bio.tools/bamview | SCR_004207 | SciCrunch Registry | 2026-09-26 02:19:47 | 21 | ||||||
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University of Saskatchewan; Saskatchewan; Canada Resource Report Resource Website 1+ mentions |
University of Saskatchewan; Saskatchewan; Canada (RRID:SCR_007998) | institution, university | SCR_007998 | SciCrunch Registry | 2026-09-26 02:19:50 | 7 | ||||||||||||||
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MultiFun Resource Report Resource Website 1+ mentions |
MultiFun (RRID:SCR_004363) | MultiFun | data or information resource, data set | MultiFun is a multifunctional classification scheme for Escherichia coli K-12 gene products. In the classification scheme, cellular functions are divided into 10 major categories: Metabolism, Information Transfer, Regulation, Transport, Cell Processes, Cell Structure, Location, Extra-chromosomal Origin, DNA Site, and Cryptic Gene. These major categories are further sub-divided into a hierarchical scheme. Two thousand nine hundred twenty-two gene products of E. coli K-12 were assigned to one or more functions depending on the role they play in the cell. Functional assignments were made to 66% of E. coli gene products, ranging from 1 to 16 assignments per gene product. The expansion of cellular function categories and the assignment to more than one category (multifunction) provides a more complete description of the gene products and their roles and hence better reflects the functional complexity of organisms. We believe this classification system will be useful in the field of genome analysis, both for annotation purposes and for comparative studies. The functional classification scheme and the cellular function assignments made to E. coli gene products can be accessed from the web at the databases GenProtEC (http://genprotec.mbl.edu) and EcoCyc (http://www.ecocyc.org). |
is related to: EcoCyc is related to: GenProtEC has parent organization: Marine Biological Laboratory |
PMID:11471834 | nlx_38338 | SCR_004363 | SciCrunch Registry | MultiFun: a cellfunction assignment schema, MultiFun: a cell function assignment schema | 2026-09-26 02:19:47 | 4 | ||||||||
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Arnold Arboretum of Harvard University: Weld Hill Microscopy Lab Resource Report Resource Website |
Arnold Arboretum of Harvard University: Weld Hill Microscopy Lab (RRID:SCR_004485) | access service resource, core facility, service resource | Microscopists at Weld Hill will find a range of tools from the simple hand lens to the confocal microscope for 3-D reconstructions. |
is listed by: Eagle I has parent organization: Harvard University; Cambridge; United States |
nlx_156117 | http://arboretum.harvard.edu/research/policies-and-instrumentation/microscopy-lab/ | SCR_004485 | SciCrunch Registry | 2026-09-26 02:19:47 | 0 | ||||||||||
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Vanderbilt Energy Balance Core Laboratory Resource Report Resource Website |
Vanderbilt Energy Balance Core Laboratory (RRID:SCR_006665) | access service resource, core facility, service resource | Core facility that provides the following services: Energy Expenditure Assessment, Body Composition Assessment, Physical Activity Assessment. This component of the core utilizes existing institutional resources for measurement of energy balance and provides personnel support that permit assessment of research in energy balance and nutrition assessment. | performing a clinical assessment |
is listed by: Eagle I has parent organization: Vanderbilt University; Tennessee; USA |
nlx_156655 | SCR_006665 | SciCrunch Registry | 2026-09-26 02:19:49 | 0 | ||||||||||
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Dartmouth Shared Instruments Core Laboratory Resource Report Resource Website |
Dartmouth Shared Instruments Core Laboratory (RRID:SCR_006415) | access service resource, core facility, service resource |
Core facility that provides the following services: 7500 fast Q-PCR service, MALDI MS service, Agilent 2100 bioanalyzer service, NanoDrop 1000 service. |
real-time pcr, mass spectrometry assay, dna sequencing, spectrophotometry, rna quality analysis, dna quality analysis |
is listed by: Eagle I has parent organization: Dartmouth College; New Hampshire; USA |
nlx_156243 | http://cancer.dartmouth.edu/molecular_biology/shared_instruments.html | SCR_006415 | SciCrunch Registry | 2026-09-26 02:19:49 | 0 | |||||||||
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SMART Video-tracking Resource Report Resource Website 1000+ mentions |
SMART Video-tracking (RRID:SCR_002852) | SMART | commercial organization, software resource | Software for the automated evaluation of behavior in a range of pre-clinical and neuroscience applications in basic and clinical psychopharmacology. Applications include phenotype characterization and studying the behavioral effects of pharmacologic substances. | phenotype, recording, activity, trajectory, event, social interaction, global activity, anxiety, depression, learning, memory, locomotor activity, exploration, reward, addiction, behavior | Restricted | rid_000052 | SCR_002852 | SciCrunch Registry | Panlab SMART video tracking system, SMART Video tracking | 2026-09-26 02:19:46 | 2358 | ||||||||
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BWH Cell Culture and Microscopy Core Resource Report Resource Website |
BWH Cell Culture and Microscopy Core (RRID:SCR_005562) | access service resource, core facility, service resource |
Core facility that provides the following services: Cell immortalization through retroviral or lentiviral vectors service, Microscopy training, User-based microscopy service. |
targeted homologous recombination, microscopy | is listed by: Eagle I | nlx_156138 | http://rheinwaldlab.bwh.harvard.edu/core.html | SCR_005562 | SciCrunch Registry | 2026-09-26 02:19:48 | 0 | |||||||||
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High-dose Ursodiol Therapy of Primary Sclerosing Cholangitis Resource Report Resource Website |
High-dose Ursodiol Therapy of Primary Sclerosing Cholangitis (RRID:SCR_006772) | HUSC | clinical trial, resource | Multi-center, placebo-controlled trial of ursodiol in primary sclerosing cholangitis (PSC). A total of 150 patients with previously untreated PSC without cirrhosis were randomly assigned to receive high doses of ursodiol (20-25 mg/kg/day) or placebo for two years. Patients underwent medical evaluation, endoscopic retrograde cholangiography, and liver biopsy before randomization and again at two-year intervals. The endpoints of therapy were progression of hepatic fibrosis, liver decompensation, liver transplantation, or death. The treatment phase of the study was stopped for futility in June 2008; however, patients continue to be followed. Ongoing mechanistic studies are underway. | treatment, placebo, ursodeoxycholic acid, intervention, randomized, adult human, male, female |
is listed by: NIDDK Information Network (dkNET) is listed by: NIDDK Research Resources has parent organization: ClinicalTrials.gov |
Primary Sclerosing Cholangitis | NIDDK | PMID:19585548 | nlx_152836 | SCR_006772 | SciCrunch Registry | Trial of High-dose Urso in Primary Sclerosing Cholangitis, High-dose Ursodiol Therapy of Primary Sclerosing Cholangitis (HUSC), Multicentered Randomized Trial of High-dose Urso in Primary Sclerosing Cholangitis | 2026-09-26 02:19:49 | 0 | |||||
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Center for Magnetic Resonance Research Resource Report Resource Website 1+ mentions |
Center for Magnetic Resonance Research (RRID:SCR_003148) | CMRR | access service resource, biomedical technology research center, service resource, training resource | Biomedical technology research center that focuses on development of unique magnetic resonance (MR) imaging and spectroscopy methodologies and instrumentation for the acquisition of structural, functional, and biochemical information non-invasively in humans, and utilizing this capability to investigate organ function in health and disease. The distinctive feature of this resource is the emphasis on ultrahigh magnetic fields (7 Tesla and above), which was pioneered by this BTRC. This emphasis is based on the premise that there exists significant advantages to extracting biomedical information using ultrahigh magnetic fields, provided difficulties encountered by working at high frequencies corresponding to such high field strengths can be overcome by methodological and engineering solutions. This BTRC is home to some of the most advanced MR instrumentation in the world, complemented by human resources that provide unique expertise in imaging physics, engineering, and signal processing. No single group of scientists can successfully carry out all aspects of this type of interdisciplinary biomedical research; by bringing together these multi-disciplinary capabilities in a synergistic fashion, facilitating these interdisciplinary interactions, and providing adequate and centralized support for them under a central umbrella, this BTRC amplifies the contributions of each of these groups of scientists to basic and clinical biomedical research. Collectively, the approaches and instrumentation developed in this BTRC constitute some of the most important tools used today to study system level organ function and physiology in humans for basic and translational research, and are increasingly applied world-wide. CMRR Faculty conducts research in a variety of areas including: * High field functional brain mapping in humans; methodological developments, mechanistic studies, and neuroscience applications * Metabolism, bioenergetics, and perfusion studies of human pathological states (tumors, obesity, diabetes, hepatic encephalopathy, cystic fibrosis, and psychiatric disorders) * Cardiac bioenergetics under normal and pathological conditions * Automated magnetic field shimming methods that are critical for spectroscopy and ultrafast imaging at high magnetic fields * Development of high field magnetic resonance imaging and spectroscopy techniques for anatomic, physiologic, metabolic, and functional studies in humans and animal models * Radiofrequency (RF) pulse design based on adiabatic principles * Development of magnetic resonance hardware for high fields (e.g. RF coils, pre-amplifiers, digital receivers, phased arrays, etc.) * Development of software for data analysis and display for functional brain mapping. | mri, imaging, magnetic resonance spectroscopy, clinical, core facility, in vivo, brain mapping | has parent organization: University of Minnesota Twin Cities; Minnesota; USA | NCRR ; NIH Blueprint for Neuroscience Research ; NIBIB ; W. M. Keck Foundation |
Free, Freely available | nif-0000-00563 | SCR_003148 | SciCrunch Registry | NMR Imaging and Localized Spectroscopy | 2026-09-26 02:19:46 | 5 | ||||||
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University of New South Wales; New South Wales; Australia Resource Report Resource Website 50+ mentions |
University of New South Wales; New South Wales; Australia (RRID:SCR_006094) | UNSW | institution, university |
is parent organization of: UNSW Embryology is parent organization of: University of New South Wales School of Psychology |
SCR_006094 | SciCrunch Registry | UNSW | 2026-09-26 02:19:48 | 57 | |||||||||||
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Current German Weather Stations Resource Report Resource Website |
Current German Weather Stations (RRID:SCR_003611) | Current German Weather Stations | data or information resource, data set | Data sets of current German weather stations updated hourly or every twelve hours. Data sets, in German, include: * Daily mean values ??of temperature, updated hourly. Daily archive since 29.1.2008 * Daily maximum and minimum temperature, updated every 12 hours. Daily archive since 21.7.2008 * Monthly mean values ??of temperature and deviation, updated daily . * Rainfall in the last 12 hours and monthly total, updated every 12 hours . * Monthly totals of precipitation and relative to langj. means in%, updated every 12 hours. Monthly Archive since Feb. 2008 * Air pressure and pressure tendency, updated hourly. | weather, cloud, climate, precipitation, rainfall, air pressure, temperature | is listed by: re3data.org | Copyrighted | nlx_157759 | SCR_003611 | SciCrunch Registry | Aktuelle Wetterwerte deutscher Stationen | 2026-09-26 02:19:46 | 0 | |||||||
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PathXL TMA Resource Report Resource Website |
PathXL TMA (RRID:SCR_005596) | PathXL TMA | commercial organization, software resource | Tissue microarray (TMA) Software used for Biomarker Discovery that allows TMA experiments to be performed anytime, anywhere, reducing administrative costs and time. It is designed to support TMA scoring workflow and allows configuration of experiments in minutes. Access and view clinical metadata, the TMA core, scoring criteria and the TMA map all on a single interface. | tissue microarray, pathology, clinical | is listed by: OMICtools | OMICS_00817 | SCR_005596 | SciCrunch Registry | 2026-09-26 02:19:48 | 0 | |||||||||
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University of Texas at Austin; Texas; USA Resource Report Resource Website 1+ mentions |
University of Texas at Austin; Texas; USA (RRID:SCR_005900) | UT Austin | institution, university | A major university |
is related to: LungMap is related to: RobotReviewer has parent organization: University of Texas System; Texas; USA is parent organization of: Academic Seismic Portal at UTIG is parent organization of: FUGOID: a Database for Functional Genomics of Organelle Introns is parent organization of: Aptamer Database - The Ellington Lab is parent organization of: Poldracklab Portal is parent organization of: Synapse Web Reconstruct is parent organization of: Cognitive Atlas is parent organization of: Synapse Web is parent organization of: DigiMorph is parent organization of: Amino Acid-Nucleotide Interaction Database is parent organization of: VolumeRover is parent organization of: Phenologs is parent organization of: NeuroSynth is parent organization of: Open Proteomics Database is parent organization of: University of Texas at Austin College of Pharmacy is parent organization of: University of Texas at Austin Labs and Facilities is parent organization of: Texas Advanced Computing Center is parent organization of: Aging Status and Sense of Control (ASOC) is parent organization of: HumanNet is parent organization of: Culture Collection of Algae at the University of Texas is parent organization of: CiteAs is parent organization of: University of Texas at Austin Genomic Sequencing and Analysis Core Facility is parent organization of: University of Texas at Austin Biological Mass Spectrometry Proteomics Core Facility is parent organization of: University of Texas at Austin Microscopy and Flow Cytometry Core Facility is parent organization of: University of Texas at Austin Biomedical Imaging Center Core Facility is parent organization of: University of Texas at Austin Mouse Genetic Engineering Core Facility is parent organization of: University of Texas at Austin Biomedical Research Computing Core Facility is parent organization of: University of Texas at Austin Computational Biology and Bioinformatics Core Facility is parent organization of: University of Texas at Austin Cryo Electron Microscopy Core Facility is parent organization of: University of Texas at Austin Advanced Protein Therapeutics Core Facility is parent organization of: SoftCite is parent organization of: University of Texas at Austin Shared Instrumentation Facility |
grid.89336.37 | https://ror.org/00hj54h04 | SCR_005900 | SciCrunch Registry | University of Texas at Austin | 2026-09-26 02:19:48 | 8 |
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