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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Authority Synonyms Record Last Update Mentions Count
Brodmann's Interactive Atlas
 
Resource Report
Resource Website
1+ mentions
Brodmann's Interactive Atlas (RRID:SCR_006368) atlas, data or information resource, mri d image An atlas that facilitates fMRI analysis understanding by providing access to all of the functions that have been associated with each of the 52 Brodmann's areas or corresponding gyri. Links to main publications supporting the findings are provided in PubMed ID format. Brodmann's areas with similar functions and locations have been collapsed into a single page. The word left or right has been added indicating a lateralized function. All the abstracts published on PubMed on fMRI and brain PET studies in which the Brodmann's area or its anatomical correlate were mentioned have been reviewed up to August 2008. Abstracts with poorly described experimental methods or findings clearly conflicting with established knowledge provided by the clinical model were excluded. Studies on patients were also excluded. neuroanatomy, fmri, interactive, mri, pet, brain, brodmann's areas, brodmann partition scheme region, cerebral cortex, function, brain activation, atlas fMRI consulting nlx_152117 SCR_006368 SciCrunch Registry Broadmann's Interactive Atlas 2026-10-24 12:45:43 3
University of Oxford; Oxford; United Kingdom
 
Resource Report
Resource Website
10+ mentions
University of Oxford; Oxford; United Kingdom (RRID:SCR_006361) Oxford university Collegiate research university in Oxford, England. Teaching as early as 1096, making it the oldest university in English speaking world and world second oldest university in continuous operation. uses: ShareLaTeX
uses: Overleaf
uses: ReadCube
uses: Sparrho
uses: Writefull
uses: LabArchives
uses: Bioz
is related to: Medical Research Council Harwell: An International Centre for Mouse Genetics
is related to: European Gram Negative AntiBacterial Engine
is related to: Kinetics for Drug Discovery
is related to: Kidney Health Initiative
is related to: READNA
is related to: ONE Study
is related to: European Management Platform for Emerging and Re-Emerging Infectious Disease Entities (EMPERIE)
is related to: ShareLaTeX
is related to: LabArchives
is related to: Center for Expanded Data Annotation and Retrieval
is parent organization of: University of Oxford Labs and Facilities
is parent organization of: WTCHG Genome Scan Viewer
is parent organization of: NeuroHub: the information environment for Neuroscientists
is parent organization of: bioDBcore
is parent organization of: FSL
is parent organization of: Wellcome Trust Centre for Human Genetics
is parent organization of: Structural Genomics Consortium
is parent organization of: FAIRsharing
is parent organization of: PeaKDEck
is parent organization of: CiTO - the Citation Typing Ontology
is parent organization of: Brain Bank for Autism
is parent organization of: Oxford Science Blog
is parent organization of: Oxford Centre for Functional MRI of the Brain
is parent organization of: JISC Open Citations
is parent organization of: Open Provenance Model Vocabulary
is parent organization of: Computational Genomics Analysis Tools
is parent organization of: Alpha-7 Database
is parent organization of: FMRIB Software Library
is parent organization of: PairsDB
is parent organization of: RNA Virus Database
is parent organization of: Cellular Open Resource
is parent organization of: DTU
is parent organization of: Bioinformatics and Statistical Genetics
is parent organization of: elk-reasoner
is parent organization of: CGDB
is parent organization of: Potassium Channel Database
is parent organization of: Oxford Central Proteomics Facility
is parent organization of: Colwiz
is parent organization of: myExperiment
is parent organization of: ISA Infrastructure for Managing Experimental Metadata
is parent organization of: EMIF
is parent organization of: CPFP
is parent organization of: IonChannelGenealogy
is parent organization of: Orthologous and Paralogous Transcripts in Clades
is parent organization of: HomeoDB
is parent organization of: Open Trials
is parent organization of: OVAL
is parent organization of: easyGV
is parent organization of: iHOMA2
is parent organization of: microC
is parent organization of: University of Oxford Computational Biology Research Group Core Facility
is parent organization of: University of Oxford Medical Sciences Division Computational Genomics: Analysis and Training Core Facility
is parent organization of: ARGON
is parent organization of: FAIRassist.org
Crossref funder ID:501100000769, Wikidata:Q34433, ISNI:0000 0004 1936 8948, grid.4991.5, nlx_59631 https://ror.org/052gg0110 SCR_006361 SciCrunch Registry Oxford University 2026-10-24 12:45:41 11
ChemSpider
 
Resource Report
Resource Website
1000+ mentions
ChemSpider (RRID:SCR_006360) ChemSpider data access protocol, data or information resource, database, mobile app, service resource, software application, software resource, web service Collection of chemical structures. Provides access to structures, properties and associated information from hundreds of data sources to find compounds of interest and provides services to improve this data by curation and annotation and to integrate it with users applications. collection, chemical, structure, property, data, compound, bio.tools, FASEB list is used by: Open PHACTS
is used by: GEROprotectors
is listed by: re3data.org
is listed by: bio.tools
is listed by: Debian
has parent organization: Royal Society of Chemistry
GGA Software Services ;
Waters
Free, Freely available, Registration required for some sites nlx_152101, biotools:chemspider, r3d100010205 https://bio.tools/chemspider, https://doi.org/10.17616/R38P4P SCR_006360 SciCrunch Registry 2026-10-24 12:45:43 2112
University of Oviedo; Oviedo; Spain
 
Resource Report
Resource Website
1+ mentions
University of Oviedo; Oviedo; Spain (RRID:SCR_006359) university Public university in Asturias. It is the only university in the region. It has three campus and research centres, located in Oviedo, Gijón and Mieres. is parent organization of: Mammalian Degradome Database
is parent organization of: Human Hereditary Diseases of Proteolysis
is parent organization of: Ancillary Domains Associated With Human and Mouse Proteases
nlx_53766, ISNI:0000 0001 2164 6351, grid.10863.3c, Wikidata:Q2303432, Crossref funder ID:501100006382 https://ror.org/006gksa02 SCR_006359 SciCrunch Registry 2026-10-24 12:45:42 2
EasyOpenData
 
Resource Report
Resource Website
EasyOpenData (RRID:SCR_006354) EasyOpenData authoring tool, software application, software resource Software application to create Open Data from your Google Drive spreadsheets. # Create a spreadsheet in Google Drive. Share, collaborate and refine your data as usual. # Design the template in EasyOpenData. Format your data the way you want it - any markup, any schema. # Publish your Open Data feed. Feeds update automatically when your spreadsheet is changed. author, publish nlx_152087 SCR_006354 SciCrunch Registry easy open data 2026-10-24 12:45:42 0
WebScope
 
Resource Report
Resource Website
10+ mentions
WebScope (RRID:SCR_006355) WebScope data or information resource, image collection Expansive collection of high-quality wholeslide images nlx_152089 SCR_006355 SciCrunch Registry Aperio WebScope 2026-10-24 12:45:42 17
Zebra Finch Song Learning Consortium
 
Resource Report
Resource Website
1+ mentions
Zebra Finch Song Learning Consortium (RRID:SCR_006356) Zebra Finch Song Learning Consortium data or information resource, portal, topical portal THIS RESOURCE IS NO LONGER IN SERVICE, documented August 29, 2016. Project to advance understanding of the neural mechanisms of vocal learning by providing a quantitative description of the relationship between physiological variables and vocal performance over the course of development in a songbird, the zebra finch. They propose to study vocal learning dynamically across neuronal and peripheral subsystems, using a novel collaborative approach that will harness the combined expertise of several investigators. Their proposed research model will 1) provide simultaneous measurements of acoustic, articulatory and electrophysiological data that will document the detailed dynamics of the vocal imitation process in a standardized learning paradigm; and 2) incorporate these measurements into a theoretical/computational framework that simultaneously provides a phenomenological description and attempts to elucidate the mechanistic basis of the learning process. model organism, vocal learning, development, learning, brain, song is related to: Chronux
has parent organization: Cold Spring Harbor Laboratory
is parent organization of: Zebra Finch Brain Atlas
NIH THIS RESOURCE IS NO LONGER IN SERVICE nlx_152090 SCR_006356 SciCrunch Registry 2026-10-24 12:45:41 1
GeneCommittee
 
Resource Report
Resource Website
GeneCommittee (RRID:SCR_004168) geneCommittee analysis service resource, data analysis service, production service resource, service resource, software resource Tool for extensively testing the discriminatory power of biologically relevant gene sets in microarray data classification. While the user can work with different gene set collections and several microarray data files to configure specific classification experiments, the tool is able to run several tests in parallel. It is able to render valuable information for diagnostic analyses and clinical management decisions based on systematically evaluating custom hypothesis over different data sets using complementary classifiers, a key aspect in clinical research. dna, microarray, rna-seq, gene expression, classification, gene set, gene, gene set enrichment, functional annotation is listed by: OMICtools
has parent organization: University of Vigo; Galicia; Spain
PMID:24475928 Acknowledgement requested OMICS_02291 https://github.com/michada/GeneCommittee SCR_004168 SciCrunch Registry 2026-10-24 12:45:08 0
BC Cancer Agency
 
Resource Report
Resource Website
1+ mentions
BC Cancer Agency (RRID:SCR_004201) BCCA institution A portal that provides a province-wide, population-based cancer control program for the residents of British Columbia and the Yukon. The BC Cancer Agency''s mandate covers the spectrum of cancer care, from prevention and screening, to diagnosis, treatment, and through to rehabilitation. The BC Cancer Agency''s mandate is driven by a three-fold mission: 1. To reduce the incidence of cancer; 2. To reduce the mortality rate of people with cancer; 3. To improve the quality of life of people living with cancer. This mission drives everything we do, including providing screening, diagnosis and care, setting treatment standards, and conducting research into causes of, and cures for, cancer. The BC Cancer Agency operates five regional cancer centers, providing assessment and diagnostic services, chemotherapy, radiation therapy, and supportive care. Each of the BC Cancer Agency''s centers delivers cancer treatment based on provincial standards and guidelines established by the Agency. We work in partnership with communities to provide a network of chemotherapy clinics so patients can receive care closer to home. Research is an essential part of the BC Cancer Agency''s mission to not only find the causes of cancer, but to find better treatments for prolonged life and better quality of life. With direct links between the BC Cancer Agency''s physicians and researchers at our five centers, the Deeley Research Centre (located in Victoria) and the BC Cancer Agency''s Research Centre (located in Vancouver), we can quickly translate new discoveries into clinical applications. The BC Cancer Agency''s Research Centre includes eight specialty laboratories including the Genome Sciences Centre, and the Terry Fox Laboratory. The BC Cancer Foundation raises funds for cancer research and enhancements to care at the BC Cancer Agency. is related to: BC Cancer Foundation
is parent organization of: cisRED: cis-regulatory element
is parent organization of: British Columbia Gynaecologic Tissue Bank
is parent organization of: British Columbia Tumour Tissue Repository
is parent organization of: Spark
is parent organization of: ALEA
is parent organization of: APOLLOH
is parent organization of: British Columbia Breast Cancer Tumour Bank
is parent organization of: JointSNVMix
is parent organization of: mutationSeq
is parent organization of: Mouse Gene Expression at the BC Cancer Agency
is parent organization of: C. elegans Resources
is parent organization of: BCCA Cancer Drug Manual
is parent organization of: flowCL
is parent organization of: flowBin
Cancer BC Cancer Foundation ISNI: 0000 0001 0702 3000, Wikidata: Q4835275, grid.248762.d, nlx_143635, Crossref funder ID: 501100005614 https://ror.org/03sfybe47 SCR_004201 SciCrunch Registry British Columbia Cancer Agency 2026-10-24 12:45:09 3
WardWiki
 
Resource Report
Resource Website
WardWiki (RRID:SCR_004323) data or information resource, narrative resource, wiki Wardwiki is a wiki designed to give free advice to foundation doctors (also know as interns) to help with practical issues as they arise on hospital wards. Despite the proliferation of medical websites and expensive courses there remains a large gap in provision of practical, experience based guidance to help foundation doctors survive the first two years on the wards. You may search for topics of interest but there are also sections including Popular Topics, Popular Categories, Top 25 articles, and Featured article. It is the responsibility of each foundation doctor to ensure their actions, referrals and prescriptions are accurate. These pages are written and maintained to the best ability of the contributing authors. We encourage any contributions be well founded, accurate, in good faith, without endorsement of medical products or opinions, and not to breach existing copyright. WardWiki cannot accept liability for adverse events that may arise directly or indirectly from advice given. clinical medicine nlx_33631 SCR_004323 SciCrunch Registry WardWiki.com, WardWiki - Foundation Doctor Helper, WardWiki.com - Foundation Doctor Helper 2026-10-24 12:45:10 0
SeWeR - SEquence analysis using WEb Resources
 
Resource Report
Resource Website
SeWeR - SEquence analysis using WEb Resources (RRID:SCR_004167) data or information resource, portal, service resource, software resource, topical portal Sequence analysis using Web Resources (SeWeR) is an integrated, Dynamic HTML (DHTML) interface to commonly used bioinformatics services available on the World Wide Web. It is highly customizable, extendable, platform neutral, completely server-independent and can be hosted as a web page as well as being used as stand-alone software running within a web browser. It doesn''t require any server to host itself. The goal of SeWeR is to turn your web-browser into a powerful sequence-analysis tool. It is written entirely in JavaScript1.2. SeWeR can be downloaded and mirrored freely. The whole package is just around 300K. You can even run it from a floppy. SeWeR is not compatible with Netscape 6. SeWeR now generates graphics. Savvy is a plasmid drawing software that generates plasmid map in the revolutionary Scalable Vector Graphics format from W3C. nucleic acid, protein, pcr, alignment, sequence, bio.tools is listed by: Debian
is listed by: bio.tools
has parent organization: Centre for Cellular and Molecular Biology; Hyderabad; India
PMID:11395442 biotools:sewer, nlx_18981 https://bio.tools/sewer SCR_004167 SciCrunch Registry SEquence analysis using WEb Resources, SeWeR 2026-10-24 12:45:08 0
University at Buffalo SMBS Department of Pharmacology and Toxicology
 
Resource Report
Resource Website
University at Buffalo SMBS Department of Pharmacology and Toxicology (RRID:SCR_004204) data or information resource, department portal, organization portal, portal The Department of Pharmacology and Toxicology strives to maintain excellence in the areas of research, teaching and service to the School, University, and Community. The Department offers a program of didactic course work and research training leading to the degree of Doctor of Philosophy in Pharmacology, either through the Interdisciplinary Graduate Program in Biomedical Sciences (IGPBS) or through the Medical Scientist Training Program (MSTP). Pharmacology and Toxicology have similar basic principles and often utilize similar experimental methods and approaches to address a wide range of biomedical and health-related questions. Both are sciences that are basic not only to medicine, but also to pharmacy, nursing, dentistry, public health, and veterinary medicine. Additional programs are offered for the Bachelor of Science, or a combined Bachelor of Science / Master of Science in Pharmacology and Toxicology, and a Master of Arts in Pharmacology. The graduate programs are structured to provide the candidate with a broad training in basic areas of pharmacology as well as a degree of expertise in one research area including: Neuropharmacology, Psychopharmacology, Toxicology, Molecular and Cellular Pharmacology, Clinical Pharmacology has parent organization: University at Buffalo School of Medicine and Biomedical Sciences; New York; USA nif-0000-02077 SCR_004204 SciCrunch Registry UB SMBS Dept. of Pharmacology and Toxicology 2026-10-24 12:45:09 0
Wikikidney.org
 
Resource Report
Resource Website
Wikikidney.org (RRID:SCR_004288) data or information resource, narrative resource, portal, topical portal, wiki Wikikidney.org is an effort to prevent kidney diseases and achieve better outcomes in those who have end stage renal disease. Our mission is to use this medium to make the public more aware of kidney disease in a sincere effort to prevent it when we can, and to help our colleagues achieve good outcomes in those who already have end stage renal disease. Our role is to provide as much information as possible to patients, professionals and the general public, with the hopes that this education will be a motivating factor in making the necessary changes to prevent or stall chronic kidney disease. After nearly two decades of seeing patients with end stage renal disease, it is apparent that much of what we deal with can be delayed or prevented altogether. Several medical trials and innovations in the last several years have confirmed these observations, and form the basis of this website. A major element in preventing renal illness is simply early detection, and for this one needs education. As the Internet expands and becomes more and more a tool of everyday life, we will have the ability to access and distribute information like no other generation before us. Qualified readers are encouraged to contribute to existing articles and to create articles of their own. Contents * 1 Kidney Resources - NIC * 2 Especially for Patients * 3 General Kidney Resources * 4 Issues in Nephrology * 5 Clinical Wiki Projects * 6 Be an author, editor or reviewer on wikikidney * 7 Clinical Trials * 8 Newsdesk Top Stories * 9 Essential Physician Resources * 10 Organizations * 11 Government Agencies * 12 Vendor and other Sites * 13 Patents * 14 Index nlx_30377 SCR_004288 SciCrunch Registry Wikikidney, Wiki.Nephron.org 2026-10-24 12:45:10 0
Echelon Biosciences
 
Resource Report
Resource Website
50+ mentions
Echelon Biosciences (RRID:SCR_004169) EBI commercial organization An Antibody supplier nlx_152350 SCR_004169 SciCrunch Registry Echelon Biosciences Inc., Echelon Biosciences Incorporated 2026-10-24 12:45:08 76
Brain Architecture Project
 
Resource Report
Resource Website
10+ mentions
Brain Architecture Project (RRID:SCR_004283) data or information resource, portal, topical portal Evolving portal that will provide interactive tools and resources to allow researchers, clinicians, and students to discover, analyze, and visualize what is known about the brain's organization, and what the evidence is for that knowledge. This project has a current experimental focus: creating the first brainwide mesoscopic connectivity diagram in the mouse. Related efforts for the human brain currently focus on literature mining and an Online Brain Atlas Reconciliation Tool. The primary goal of the Brain Architecture Project is to assemble available knowledge about the structure of the nervous system, with an ultimate emphasis on the human CNS. Such information is currently scattered in research articles, textbooks, electronic databases and datasets, and even as samples on laboratory shelves. Pooling the knowledge across these heterogeneous materials - even simply getting to know what we know - is a complex challenge that requires an interdisciplinary approach and the contributions and support of the greater community. Their approach can be divided into 4 major thrusts: * Literature Curation and Text Mining * Computational Analysis * Resource Development * Experimental Efforts central nervous system, connectivity, mapping, model, neuroanatomy, organism, post-mortem, structure, nervous system, structure, human, mouse, brain, zebra finch, addiction gene, addiction is used by: BICCN
lists: Allen Institute for Brain Science
lists: University of California at Los Angeles; California; USA
is related to: Mouse Brain Architecture Project
is related to: BICCN Anatomy and Morphology Project
is related to: Allen Institute for Brain Science
has parent organization: Cold Spring Harbor Laboratory
is parent organization of: Human Brain Connectivity Database
is parent organization of: OBART
is parent organization of: Zebrafinch Brain Architecture Project
is parent organization of: Mouse Brain Architecture Project
W. M. Keck Foundation ;
NIMH ;
NIDA ;
Crick-Clay Professorship in Biomathematics at CSHL ;
Mathers Foundation ;
Simons Foundation
Free, Public nlx_143664 SCR_004283 SciCrunch Registry BrainArchitecture.org, BrainArchitecture 2026-10-24 12:45:09 14
OBO Relation Ontology
 
Resource Report
Resource Website
OBO Relation Ontology (RRID:SCR_004285) OBO REL, RO controlled vocabulary, data or information resource, ontology The OBO Relation Ontology is an ontology of core relations for use by OBO Foundry ontologies. To enhance the treatment of relations in biomedical ontologies we advance a methodology for providing consistent and unambiguous formal definitions of the relational expressions used in such ontologies in a way designed to assist developers and users in avoiding errors in coding and annotation. The resulting Relation Ontology can promote interoperability of ontologies and support new types of automated reasoning about the spatial and temporal dimensions of biological and medical phenomena. The OBO Relation ontology is undergoing substantial changes: * Core domain-independent relations will live in BFO * Biology specific relations (defined in terms of core relations) will live in RO is related to: African Population Ontology
has parent organization: OBO
PMID:15892874 nlx_33226 SCR_004285 SciCrunch Registry Relation Ontology, OBO RO 2026-10-24 12:45:10 0
UniProtKB Keywords
 
Resource Report
Resource Website
100+ mentions
UniProtKB Keywords (RRID:SCR_004313) SP KW controlled vocabulary, data or information resource, database, ontology UniProtKB entries are tagged with keywords that can be used to retrieve particular subsets of entries. There are 10 categories of keywords: Biological process Cellular component Coding sequence diversity Developmental stage Disease Domain Ligand Molecular function Post-translation modification Technical term You may browse by hierarchy, search in Keywords, or list all keywords. By default, searching the keywords will look for matches in both name and definition. has parent organization: UniProtKB nlx_32497 SCR_004313 SciCrunch Registry 2026-10-24 12:45:10 265
MicroBrightfield, Inc.
 
Resource Report
Resource Website
50+ mentions
MicroBrightfield, Inc. (RRID:SCR_004314) MBF commercial organization A provider for commercial products for analyzing neuronal morphology, stereology, etc. neurolucida, neuronal morphology, neuronal stereology Organization Wikidata: Q6714719, grid.421345.5, nif-0000-00110 https://ror.org/02zynam48 SCR_004314 SciCrunch Registry mbf Bioscience, MicroBrightfield 2026-10-24 12:45:10 58
University of Pennsylvania; Philadelphia; USA
 
Resource Report
Resource Website
10+ mentions
University of Pennsylvania; Philadelphia; USA (RRID:SCR_004275) UPenn, Penn State university University of Pennsylvania is private Ivy League research university located in University City neighborhood of Philadelphia, Pennsylvania. Established in 1740, UPenn has 4 undergraduate schools and 12 graduate schools. undergraduate, graduate, master's, doctoral, phD, institution, university uses: Research Accelerator
is affiliated with: Diabetes Research Centers
is related to: International AMD Genetics Consortium
is related to: Clinical and Translational Science Awards Consortium
is related to: Cooperative Human Tissue Network
is related to: PIVOT software
is related to: Urinary Stone Disease Research Network
is parent organization of: Penn Cell and Developmental Biology Zebrafish Core
is parent organization of: Penn Clinical Research Computing Unit
is parent organization of: Penn Community Outreach Using Health System Informatics Core
is parent organization of: Penn Hippocampus Atlas
is parent organization of: NIH/Merial Veterinary Scholars Program
is parent organization of: Penn Diabetes Research Center Mouse Phenotyping Physiology and Metabolism Core
is parent organization of: Penn Research Instrumentation Shop
is parent organization of: Penn Small Animal Imaging Facility: PET/SPECT/CT Sub-Core
is parent organization of: Penn Translational Biomarker Core
is parent organization of: Diffusion Tensor Imaging ToolKit
is parent organization of: ApiDots
is parent organization of: Hierarchical Attribute Matching Mechanism for Elastic Registration
is parent organization of: ITK-SNAP
is parent organization of: Database of Transcribed Sequences
is parent organization of: PennCNV
is parent organization of: Brain lesion segmentation tool using SVM
is parent organization of: RNA Abundance Database
is parent organization of: Cognitive Electrophysiology Data Portal
is parent organization of: ANTS - Advanced Normalization ToolS
is parent organization of: Atrophy Simulation Package
is parent organization of: 3DViewnix
is parent organization of: miRGen
is parent organization of: OrthoMCL DB: Ortholog Groups of Protein Sequences
is parent organization of: University of Pennsylvania School of Medicine Penn Diabetes Research Center Pancreatic Islet Cell Biology Core Facility
is parent organization of: BRAID
is parent organization of: AHEAD
is parent organization of: Penn Laser Confocal Microscope Core
is parent organization of: DRAMMS
is parent organization of: fMRI Grocer
is parent organization of: Penn Automated Claims and Medical Record Databases
is parent organization of: CHOP Biostatistics and Data Management Core
is parent organization of: CHOP CTRC Behavioral Neurosciences Core
is parent organization of: CHOP CTRC Cardiovascular Imaging Core
is parent organization of: CHOP CTRC Nutrition Core Nutrition Assessment
is parent organization of: CHOP CTRC Ophthalmology Core
is parent organization of: CHOP Clinical Trials Office
is parent organization of: CHOP Human Embryonic stem cell/induced pluripotent stem cell Core
is parent organization of: CHOP Nucleic Acid/Protein Core
is parent organization of: CHOP Pathology Core Laboratories
is parent organization of: Penn/CHOP CTRC Informatics Services Core
is parent organization of: Monell Behavioral and Physiological Phenotyping Core
is parent organization of: Monell Chemosensory Receptor Signaling Core
is parent organization of: Monell Genotyping and DNA/RNA Analysis Core
is parent organization of: Monell Histology and Cellular Localization Core
is parent organization of: Penn Mass Spectrometry Molecular Profiling Core
is parent organization of: Penn BioMechanics Core Facility
is parent organization of: Penn Biological Chemistry Resource Center
is parent organization of: Penn Cancer Histology Core
is parent organization of: Penn Cell Center Services Facility
is parent organization of: Penn Cell Center Stockroom
is parent organization of: Penn Cell and Developmental Biology Microscopy Core
is parent organization of: Penn Chemistry NMR Facility
is parent organization of: Penn Clinical Cell and Vaccine Production Facility
is parent organization of: Penn Community Engagement and Research Core
is parent organization of: Penn/CHOP CTRC Bionutrition Research Core Dietary Assessment
is parent organization of: Penn Electron Microscopy Resource Laboratory
is parent organization of: Penn Flow Cytometry and Cell Sorting Resource Laboratory
is parent organization of: Penn Investigational Drug Service
is parent organization of: Penn Gene Targeting Service
is parent organization of: University of Pennsylvania Molecular Profiling Facility
is parent organization of: Penn High-Throughput Sequencing Facility
is parent organization of: University of Pennsylvania High-performance Computing
is parent organization of: Penn Histology and Gene Expression Core
is parent organization of: Penn Human Immunology Core
is parent organization of: Penn Interventional Radiology Animal Catheter Lab
is parent organization of: Penn Mass Spectrometry Facility
is parent organization of: University of Pennsylvania Molecular Profiling Facility Bioinformatics
is parent organization of: Penn NBIC Probe Facility
is parent organization of: Penn Neurobehavior Testing Core
is parent organization of: Penn Next-Generation Sequencing Core
is parent organization of: Penn Proteomics and Systems Biology Core
is parent organization of: Penn Diabetes Research Center Radioimmunoassay and Biomarkers Core Facility
is parent organization of: Penn Regional Nanotechnology Facility
is parent organization of: Penn Small Animal Imaging Facility
is parent organization of: Penn Small Animal Imaging Facility: MRI/MRS Sub-Core
is parent organization of: Penn Small Animal Imaging Facility: Optical/Bioluminescence Sub-Core
is parent organization of: Penn Small Animal Imaging Facility: Ultrasound Sub-Core
is parent organization of: Pennsylvania University Perelman School of Medicine Stem Cell and Xenograft Core Facility
is parent organization of: Penn Diabetes Research Center Transgenic and Chimeric Mouse Core Facility
is parent organization of: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis Vector Core Facility
is parent organization of: Penn/CHOP CTRC Research Nurse Core
is parent organization of: Penn/CHOP CTRC Sleep Core
is parent organization of: Penn/CHOP CTRC Study Design and Biostatistics Core
is parent organization of: Penn/CHOP CTRC Translational Core Laboratories
is parent organization of: Penn/CHOP Office of Human Subject Recruitment and Protection
is parent organization of: TESS: Transcription Element Search System
is parent organization of: CoRAL - Classification of RNAs by Analysis of Length
is parent organization of: University of Pennsylvania Labs and Facilities
is parent organization of: University of Pennsylvania Perelman School of Medicine; Pennsylvania; USA
is parent organization of: SBIA
is parent organization of: TalkBank
is parent organization of: IsoformEx
is parent organization of: Neuron-C
is parent organization of: GIMME
is parent organization of: DTI-TK
is parent organization of: Referral Center for Animal Models of Human Genetic Diseases
is parent organization of: MAJIQ
is parent organization of: ReBATE
is parent organization of: PennAI
is parent organization of: ITK-SNAP
is parent organization of: Pharmacogenetics of Nicotine Addiction Treatment
is parent organization of: 4D Genome
is parent organization of: AsPredicted
is parent organization of: HistoloZee
is parent organization of: University of Pennsylvania School of Veterinary Medicine Center for Host Microbial Interactions Core Facility
is parent organization of: University of Pennsylvania Electronic Phenotyping Resource Core Facility
is parent organization of: University of Pennsylvania Penn Vet Imaging Core Facility
is parent organization of: University of Pennsylvania School of Dental Medicine Tissue Processing Laboratory Core Facility
is parent organization of: University of Pennsylvania Institute for RNA Innovation Engineered mRNA and Targeted Nanomedicine Core Facility
is parent organization of: University of Pennsylvania Institute for Immunology and Immune Health I3H Core Facility
is parent organization of: University of Pennsylvania Institute for RNA Innovation Targeting Core Facility
is parent organization of: University of Pennsylvania Bollinger Digital Fabrication Laboratory Core Facility
is parent organization of: University of Pennsylvania Perelman School of Medicine Clinical Research Collaboration Unit Core Facility
has organization facet: C4R
Wikidata:Q49117, SCR_022445, grid.25879.31, ISNI:0000 0004 1936 8972, nlx_24937, Crossref funder ID:100006920 https://ror.org/00b30xv10 SCR_004275 SciCrunch Registry University of Pennsylvania 2026-10-24 12:45:09 11
Babel
 
Resource Report
Resource Website
100+ mentions
Babel (RRID:SCR_004307) Babel data analysis software, data processing software, software application, software resource THIS RESOURCE IS NO LONGER IN SERVICE. Documentedt on January 10, 2023. Software that implements babel routines for identifying unusual ribosome protected fragment counts given mRNA counts, THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. windows, macos x is listed by: OMICtools
has parent organization: University of California at San Francisco; California; USA
THIS RESOURCE IS NO LONGER IN SERVICE OMICS_01530 SCR_004307 SciCrunch Registry babel: Ribosome profiling data analysis 2026-10-24 12:45:10 175

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  3. Logging in and Registering

    If you have an account on dkNET then you can log in from here to get additional features in dkNET such as Collections, Saved Searches, and managing Resources.

  4. Searching

    Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:

    1. Use quotes around phrases you want to match exactly
    2. You can manually AND and OR terms to change how we search between words
    3. You can add "-" to terms to make sure no results return with that term in them (ex. Cerebellum -CA1)
    4. You can add "+" to terms to require they be in the data
    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search
  5. Collections

    If you are logged into dkNET you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.