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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Rainin: Pipet-Lite LTS Pipette L-1000XLS+ Resource Report Resource Website |
Rainin: Pipet-Lite LTS Pipette L-1000XLS+ (RRID:SCR_023894) | instrument resource | Pipet-Lite™ XLS+ manual single-channel pipette, 100-1000 μL, uses LTS™ LiteTouch™ tips. Accurate and precise, ergonomic, autoclavable liquid end, rugged and durable (L-1000XLS+) | Pipette, 100 ul to 1000 ul, instrument, equipment, Rainin | Restricted | SCR_023894 | Pipet-Lite LTS Pipette L-1000XLS+ | 2026-08-01 12:07:58 | 0 | ||||||||||
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Rainin: Pipet-Lite LTS Pipette L-200XLS+ Resource Report Resource Website |
Rainin: Pipet-Lite LTS Pipette L-200XLS+ (RRID:SCR_023892) | instrument resource | Pipet-Lite™ XLS+ manual single-channel pipette, 20-200 μL, uses LTS™ LiteTouch™ tips. Accurate and precise, ergonomic, autoclavable liquid end, rugged and durable (L-200XLS+) | Pipette, 20 ul to 200 ul, instrument, equipment, manual single channel pipette, Rainin | Restricted | SCR_023892 | , Pipet-Lite™ XLS+, Rainin Pipet-Lite™ XLS+ | 2026-08-01 12:08:23 | 0 | ||||||||||
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Nikon: N-SIM S Super Resolution Microscope Resource Report Resource Website |
Nikon: N-SIM S Super Resolution Microscope (RRID:SCR_023803) | instrument resource | Microscope enables super solution imaging of live cells at ten times the speed of conventional SIM. Powered by ECLIPSE Ti2-E Inverted Research Microscope, taking advantage of its advanced optics, stability and features. | Nikon, live cells imaging, imaging, USEDit | is listed by: USEDit | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_023803.pdf | SCR_023803 | N-SIM S Super Resolution Microscope | 2026-08-01 12:07:57 | 0 | ||||||||
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Hitachi: 16-bit 3-CCD color camera HV-F203GV / HV-F203SCL Resource Report Resource Website |
Hitachi: 16-bit 3-CCD color camera HV-F203GV / HV-F203SCL (RRID:SCR_023888) | instrument resource | High resolution 1/1.8" 3 CCD Progressive Scan Color Camera with 1600 x 1200 pixel (UXGA) that is installed in the ZEISS Axioscan Z1 slide scanner. Integrated functions include electronic shutter from 1/30s to 1/100000s, Long term Integration up to 4s, AGC, external Trigger, Auto Shading, 6 Colour Masking, Frame-On-Demand Function, White Balance, AGC, Black Level Adjustment and Partial Scan Function. | Hitachi, CCD color camera, bright color, camera, instrument, equipment | is related to: Zeiss: Axio Scan.Z1 Slide Scanner | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_023888.pdf | SCR_023888 | HV-F203GV / HV-F203SCL camera | 2026-08-01 12:08:23 | 0 | ||||||||
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Cytiva: Biacore 4000 Resource Report Resource Website 1+ mentions |
Cytiva: Biacore 4000 (RRID:SCR_023766) | instrument resource | High throughput Surface Plasmon Resonance system with high quality interaction data for better informed decision making in antibody selection, drug discovery and more., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | USEDit, Cytiva, surface plasmon resonance, | THIS RESOURCE IS NO LONGER IN SERVICE | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_023766.pdf | SCR_023766 | , Biacore 4000, Biacore™ 4000 surface plasmon resonance system, Biacore TM 4000 | 2026-08-01 12:08:12 | 1 | |||||||||
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Molecular Devices: SpectraMax iD3 multi-mode microplate reader Resource Report Resource Website 10+ mentions |
Molecular Devices: SpectraMax iD3 multi-mode microplate reader (RRID:SCR_023920) | instrument resource | Microplate reader to measure absorbance, fluorescence and luminescence. | Microplate reader, measure absorbance, measure fluorescence, measure luminescence, | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_023920 | SCR_023920 | Molecular Devices SpectraMax iD3 multi-mode microplate reader, SpectraMax® iD3 multi-mode microplate reader | 2026-08-01 12:08:24 | 13 | |||||||||
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caftools Resource Report Resource Website |
caftools (RRID:SCR_023982) | software resource | Software tools for manipulating Common Assembly Format files text format for describing sequence assemblies,that can be downloaded from the Sanger ftp site. | is listed by: Debian | Free, Available for download, Freely available | OMICS_24974 | https://sources.debian.org/src/caftools/ | SCR_023982 | 2026-08-01 12:08:24 | 0 | |||||||||
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Conquest DICOM Resource Report Resource Website |
Conquest DICOM (RRID:SCR_023993) | softwre application | Software for DICOM training and testing,Demonstration and research image archives,Image format conversion from scanner with DICOM network access,DICOM image viewing and slide making, DICOM image selection, (limited) editing, and splitting and merging of series, Advanced scriptable image modification, filtering, forwarding and conversion, DICOM caching and archive merging, DICOM web access for viewing and data management (scriptable),Connection to Lua IDE for all sorts of DICOM manipulation. | DICOM training and testing, | is listed by: Debian | Free, Available for download, Freely available | https://sources.debian.org/src/conquest/ | SCR_023993 | conquest-common, conquest-dbase, conquest-postgres, conquest-dicom-server, conquest-sqlite, conquest-mysql | 2026-08-01 12:07:59 | 0 | ||||||||
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CHIME Resource Report Resource Website |
CHIME (RRID:SCR_023987) | softwre application | Software designed to assist hospitals and public health officials with understanding hospital capacity needs as they relate to the COVID pandemic. CHIME enables capacity planning by providing estimates of total daily and running totals of inpatient hospitalizations, ICU admissions, and patients requiring ventilation. | providing estimates, capacity planning, | is listed by: Debian | Free, Available for download, Freely available | https://sources.debian.org/src/chime/ | SCR_023987 | COVID-19 Hospital Impact Model for Epidemics, chime | 2026-08-01 12:08:13 | 0 | ||||||||
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NanoString: CosMx Spatial Molecular Imager Resource Report Resource Website 10+ mentions |
NanoString: CosMx Spatial Molecular Imager (RRID:SCR_023909) | instrument resource | Integrated system with mature cyclic fluorescent in situ hybridization chemistry, resolution imaging readout, interactive data analysis and visualization software. Analysis platform to provide spatial multiomics with formalin-fixed paraffin-embedded and fresh frozen tissue samples at cellular and subcellular resolution. CosMx SMI enables rapid quantification and visualization of up to 1,000 RNA and 64 validated protein analytes. Spatial single-cell imaging platform that drives deeper insights for cell atlasing, tissue phenotyping, cell-cell interactions, cellular processes, and biomarker discovery. | Spatial single-cell imaging platform, nanoString, spatial molecular imager, molecular imager, formalin-fixed paraffin-embedded samples, fresh frozen tissue samples, cellular and subcellular resolution, | is related to: NanoString Technologies | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_023909.pdf | SCR_023909 | CosMx Spatial Molecular Imager, NanoString CosMx Spatial Molecular Imager | 2026-08-01 12:08:24 | 16 | ||||||||
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SunCollect MALDI Sprayer Resource Report Resource Website |
SunCollect MALDI Sprayer (RRID:SCR_023907) | instrument resource | For tissue preparation for Imaging MALDI. The sprayer can handle fresh-frozen or FFPE tissue sections. Enzymes such as trypsin can be applied to the tissue for in situ digestion. Sprayer offers the following key features: Automated delivery of matrix, enzyme or derivatization solutions; 6 port PEEK valve with low dead-volume to minimise liquid usage; Automatic self-cleaning function at end of matrix application; 100 % biocompatible; Compact unit 36 x 49 x 40 cm (w,d,h);Preprogrammed spray protocols;Up to 8 sample slides can be sprayed simultaneously;Easy to use software. | SunChrom Wissenschaftliche Geräte GmbH, SunChrom, Tissue Preparation, | is related to: SunChrom | Restricted | SCR_023907 | SunCollect Sprayer | 2026-08-01 12:08:13 | 0 | |||||||||
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SunChrom: SunCollect CF Spotter Resource Report Resource Website |
SunChrom: SunCollect CF Spotter (RRID:SCR_023906) | instrument resource | CF-Spotter for MALDI-TOF microbial identification. Enables fast, efficient and reproducible sample preparation for MALDI-TOF microbial identification system and relieves your laboratory staff from tedious and time-consuming pipetting. Due to the non-contact application of the solutions, there is no carryover of the samples and the costs for consumables such as pipette tips are eliminated. | SunChrom Wissenschaftliche Geräte GmbH, SunChrom, MALDI-TOF microbial identification system, microbial identification, instrument, equipment | is related to: SunChrom | Restricted | SCR_023906 | CF-Spotter for MALDI-TOF Microbial Identification | 2026-08-01 12:08:23 | 0 | |||||||||
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SunChrom: SunDigest Incubator Resource Report Resource Website |
SunChrom: SunDigest Incubator (RRID:SCR_023905) | instrument resource | SunDigest incubation device provides fully software controlled and highly reproducible digestion process under standardized conditions. Feature includes Temperatures precisely adjustable between 4 °C and 50 °C; On-Tissue digestion process under optimal humidity; Preservation of spatial resolution; High performance digestion at 50 °C; Full digestion process control.Essential for reproducible results. | SunChrom Wissenschaftliche Geräte GmbH, SunChrom, incubator, incubator software controlled, standardized conditions, instrument, equipment | is related to: SunChrom | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_023905.pdf | SCR_023905 | 2026-08-01 12:08:13 | 0 | |||||||||
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SunChrom: SunTissuePrep Tissue Section Preparation System Resource Report Resource Website |
SunChrom: SunTissuePrep Tissue Section Preparation System (RRID:SCR_023904) | instrument resource | System automates all tissue section preparation steps that were previously performed manually. Deparaffinization, rehydration, antigen-retrieval and pH-adjustment steps are performed efficiently, reliably and fully automated. | SunChrom Wissenschaftliche Geräte GmbH, SunChrom, tissue section, deparaffinization, rehydration, antigen-retrieval, pH-adjustment, automated preparation, | is related to: SunChrom | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_023904.pdf | SCR_023904 | SunTissuePrep | 2026-08-01 12:07:58 | 0 | ||||||||
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EMMAX Resource Report Resource Website 1+ mentions |
EMMAX (RRID:SCR_024012) | softwre application | Software statistical test for large scale human or model organism association mapping accounting for the sample structure. In addition to the computational efficiency obtained by EMMA algorithm, EMMAX takes advantage of the fact that each loci explains only a small fraction of complex traits, which allows us to avoid repetitive variance component estimation procedure, resulting in a significant amount of increase in computational time of association mapping using mixed model. | statistical test, human or model organism association mapping, sample structure, association mapping | is listed by: Debian | Free, Available for download, Freely available | OMICS_08871 | https://sources.debian.org/src/emmax/ | SCR_024012 | Efficient Mixed-Model Association eXpedited, emmax | 2026-08-01 12:07:59 | 3 | |||||||
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Leica: Autostainer ST5010 XL Resource Report Resource Website 1+ mentions |
Leica: Autostainer ST5010 XL (RRID:SCR_023957) | instrument resource | Leica ST5010 Autostainer XL provides reproducible, consistent high quality staining, and increased workload throughput compared to manual staining. | Leica, staining, instrument, equipment, | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_023957.pdf | Model_Number_ST5010 XL | SCR_023957 | 2026-08-01 12:08:13 | 2 | |||||||||
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dicompyler Resource Report Resource Website |
dicompyler (RRID:SCR_024006) | softwre application | Software extensible open source radiation therapy research platform based on the DICOM standard. It also functions as a cross-platform DICOM RT viewer. | radiation therapy research platform, DICOM standard, cross platform DICOM RT viewer, | is listed by: Debian | DOI:10.1118/1.3468652 | Free, Available for download, Freely available | https://sources.debian.org/src/dicompyler/, https://github.com/bastula/dicompyler | SCR_024006 | 2026-08-01 12:08:24 | 0 | ||||||||
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foreign Resource Report Resource Website |
foreign (RRID:SCR_024025) | softwre application | Software tool for reading and writing data stored by some versions of 'Epi Info', 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', and for reading and writing some 'dBase' files. | Reading and writing data, 'Epi Info', 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', reading and writing some 'dBase' files, | is listed by: Debian | Free, Available for download, Freely available | https://sources.debian.org/src/foreign/ | SCR_024025 | r-cran-foreign | 2026-08-01 12:08:24 | 0 | ||||||||
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Wind Integration National Dataset Toolkit Resource Report Resource Website 1+ mentions |
Wind Integration National Dataset Toolkit (RRID:SCR_023782) | WIND | data or information resource | United States national wind dataset. Provides high spatial and temporal resolution wind power, wind power forecast, and meteorological data for 7-year period at over 126,000 locations throughout continental United States. The largest publicly available wind power data set in the world. Used for wind energy integration studies. It is accessible through Web-based API. | United States, national wind dataset, wind energy integration studies, high spatial and temporal resolution wind power, wind power forecast, meteorological data, | U.S. Department of Energy | DOI:10.1016/j.apenergy.2015.03.121 | Free, Freely available | SCR_023782 | WIND Toolkit | 2026-08-01 12:08:23 | 1 | |||||||
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Agilent: 6495 Triple Quadrupole LC/MS Resource Report Resource Website |
Agilent: 6495 Triple Quadrupole LC/MS (RRID:SCR_023937) | instrument resource | Agilent 6495C triple quadrupole LC/MS system increases capacity and sensitivity for targeted quantitation applications. Used to investigate more diverse and biologically relevant groups of targeted peptides, small molecules and metabolites in single experiment without compromising sensitivity, quantitative accuracy, or linearity. | Stanford, instrument, equipment, targeted quantitation applications, targeted peptides, small molecules, metabolites | is used by: Stanford University Vincent Coates Foundation Mass Spectrometry Laboratory Core Facility | Open | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_023937.pdf | Model_Number_Agilent_6495 | SCR_023937 | Stanford Agilent 6495 Triple Quadrupole LC/MS system, Agilent 6495 Triple Quadrupole LC/MS system | 2026-08-01 12:08:13 | 0 |
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