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http://www.mpi-bremen.de/en/

The Max Planck Institute for Marine Microbiology is an international university that offers the PhD programme International Max-Planck Research School (IMPRS) of Marine Microbiology (Marmic) together with the Alfred Wegener Institute for Polar and Marine Research, the University of Bremen and Jacobs University Bremen. Currently, the institute consists of four departments with several associated research groups: Microbiology, Biogeochemistry, Molecular Ecology, and Symbiosis.

Proper citation: Max Planck Institute for Marine Microbiology; Bremen; Germany (RRID:SCR_000978) Copy   

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http://www.montana.edu/

Montana State University is a university institute has programs for undergraduate, master's and doctoral degrees. There are 54 master's degree options, 37 doctoral degree options including one specialist program, and 14 certificate options.

Proper citation: Montana State University (RRID:SCR_000979) Copy   

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http://www.iimcb.gov.pl/

International Institute of Molecular and Cell Biology creates partnerships with research centers within and outside Poland. This organization provides a base of administration, management of finances and resources, sharing space and equipment, grant writing and grant management procedures, etc. They organize workshops, training courses, conferences and other scientific events for researchers of various specialties and nationalities. Additionally, this organization commercializes results to provide biotechnological solutions with regards to the global economy and global research services deals.

Proper citation: International Institute of Molecular and Cell Biology; Warsaw; Poland (RRID:SCR_000971) Copy   

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http://www.iisc.ac.in/

A public research university for science and higher education in India. The university has six main divisions, including the biological sciences, chemical sciences, electrical sciences, mechanical sciences, physical and mathematical sciences, and interdisciplinary research.

Proper citation: Indian Institute of Science; Bangalore; India (RRID:SCR_000969) Copy   

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http://www.efsa.europa.eu/

A government granting agency which consults with partnered programs through national authorities and food safety agencies. EFSA organizes its annual and multi-annual work program according to priorities agreed with the European Commission and other partners, taking into account available resources. EFSA staff may also produce scientific outputs on behalf of the agency, such as peer reviews of the assessment of active substances in pesticides, or responses to urgent requests for advice. EFSA staff also monitor and analyze information and data on biological hazards, chemical contaminants, food consumption and emerging risks.

Proper citation: European Food Safety Authority (RRID:SCR_000963) Copy   

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http://www.temple.edu/medicine/departments_centers/basic_science/neuroscience.htm

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 14,2025. A department within the Temple University School of Medicine, which focuses on the education and research. This organization also hosts seminar series in neuroscience, sponsors annual lectures in neuroscience, and organizes bi-annual one-day workshops. This department has collaborative projects with researchers from the microbiology, immunology, pharmacology, radiology and the center for substance abuse research departments.

Proper citation: Temple University School of Medicine, Department of Neuroscience (RRID:SCR_000720) Copy   

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https://ethz.ch/de.html

Public institute of technology in Zurich, Switzerland that specializes in science, technology, mathematics and management. École Polytechnique Fédérale de Lausanne is its sister university.

Proper citation: ETH Zurich; Zurich; Switzerland (RRID:SCR_000962) Copy   

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http://franklin.imgen.bcm.tmc.edu/

The mission of the Baylor College of Medicine - Shaw Laboratory is to apply methods of statistics and bioinformatics to the analysis of large scale genomic data. Our vision is data integration to reveal the underlying connections between genes and processes in order to cure disease and improve healthcare.

Proper citation: Baylor College of Medicine - Shaw Laboratory (RRID:SCR_000604) Copy   

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http://gdm.fmrp.usp.br/

Laboratory portal of the University of Sao Paulo Molecular Genetics and Bioinformatic Laboratory.

Proper citation: USP Molecular Genetics and Bioinformatics Laboratory (RRID:SCR_000605) Copy   

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http://www.icmr.nic.in/

A government-funded council for the promotion and coordination of biomedical research in India. The council focuses on specific diseases such as HIV/AIDS, tuberculosis, and leprosy in addition to national health priorities including the management of communicable diseases, fertility control, and mental health research.

Proper citation: Indian Council of Medical Research; New Delhi; India (RRID:SCR_000968) Copy   

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http://biomed.med.miami.edu/

A department within the University of Miami which offers both undergraduate and postgraduate programs in neuroscience. The graduate program provides neuroscience research training in biological, behavioral, and physical sciences. This organization also conducts research through 55 active laboratories.

Proper citation: University of Miami, Department of Neuroscience (RRID:SCR_000723) Copy   

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http://www.fudan.edu.cn/en/

A public university in Shanghai, China that confers undergraduate and graduate degrees.

Proper citation: Fudan University; Shanghai; China (RRID:SCR_000965) Copy   

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http://www.bumc.bu.edu/cardiovascularproteomics/

The Cardiovascular Proteomics Center is a research center funded by the NIH/NHLBI to analyze and identify proteins that may be modified or created by oxidative stress. The CPC is developing and applying new proteomics methodology and instrumentation to the analysis of known proteins and those yet to be discovered.

Proper citation: Cardiovascular Proteomics Center (RRID:SCR_000603) Copy   

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http://skylign.org/

A tool for creating logos representing both sequence alignments and profile hidden Markov models. The interactive logos enable scrolling, zooming, and inspection of underlying values. Skylign can avoid sampling bias in sequence alignments by down-weighting redundant sequences and by combining observed counts with informed priors. It also simplifies the representation of gap parameters, and can optionally scale letter heights based on alternate calculations of the conservation of a position.

Proper citation: Skylign (RRID:SCR_001176) Copy   

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https://rdrr.io/bioc/sRAP/

Software package that provides a pipeline for gene expression analysis (primarily for RNA-Seq data). The normalization function is specific for RNA-Seq analysis, but all other functions (Quality Control Figures, Differential Expression and Visualization, and Functional Enrichment via BD-Func) will work with any type of gene expression data.

Proper citation: sRAP (RRID:SCR_001297) Copy   

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https://rdrr.io/bioc/yaqcaffy/

Software package for quality control of Affymetrix GeneChip expression data and reproducibility analysis of human whole genome chips with the MAQC reference datasets.

Proper citation: yaqcaffy (RRID:SCR_001295) Copy   

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http://www.feinberg.northwestern.edu/

Medical school of Northwestern University which focuses on research initiatives, clinical affiliates, and global outlook.

Proper citation: Northwestern University Feinberg School of Medicine; Illinois; USA (RRID:SCR_001058) Copy   

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http://www.princeton.edu/

A private Ivy League research university based in New Jersey that confers undergraduate and graduate degrees in the humanities, social sciences, natural sciences, and engineering. It offers professional degrees in international affairs, engineering and applied science, architecture, and finance

Proper citation: Princeton University; New Jersey; USA (RRID:SCR_001059) Copy   

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http://www.medicine.uic.edu/

The medical school division of the University of Illinois with four separate campuses. The school focuses on excellence in research, education and clinical work, diversity and innovation, and collaboration.

Proper citation: University of Illinois College of Medicine; Illinois; USA (RRID:SCR_001057) Copy   

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http://www.bioconductor.org/packages/release/bioc/html/snm.html

Software package that uses a modeling strategy especially designed for normalizing high-throughput genomic data. The premise is that your data is a function of study-specific variables which are either biological variables that represent the target of the statistical analysis, or adjustment variables that represent factors arising from the experimental or biological setting the data is drawn from. The SNM approach aims to simultaneously model all study-specific variables in order to more accurately characterize the biological or clinical variables of interest.

Proper citation: SNM (RRID:SCR_001299) Copy   

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