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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Max Planck Institute for Marine Microbiology; Bremen; Germany Resource Report Resource Website |
Max Planck Institute for Marine Microbiology; Bremen; Germany (RRID:SCR_000978) | MPI | institution | The Max Planck Institute for Marine Microbiology is an international university that offers the PhD programme International Max-Planck Research School (IMPRS) of Marine Microbiology (Marmic) together with the Alfred Wegener Institute for Polar and Marine Research, the University of Bremen and Jacobs University Bremen. Currently, the institute consists of four departments with several associated research groups: Microbiology, Biogeochemistry, Molecular Ecology, and Symbiosis. | institute, microbiology, marine, marine microbiology, bremen, germany, mpi for marine microbiology, phD program, marmic, imprs, microbiology, biogeochemistry, molecular ecology, ecology, symbiosis |
has parent organization: Max-Planck-Gesellschaft is parent organization of: MeGX is parent organization of: TETRA is parent organization of: TaxSOM is parent organization of: SINA |
ISNI: 0000 0004 0491 3210, nlx_81711, Wikidata: Q876880, grid.419529.2 | https://ror.org/02385fa51 | SCR_000978 | SciCrunch Registry | max planck institut fur marine mikrobiologie, Max Planck Institute for Marine Microbiology | 2026-09-26 02:12:53 | 0 | |||||||
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Montana State University Resource Report Resource Website 1+ mentions |
Montana State University (RRID:SCR_000979) | MSU | university | Montana State University is a university institute has programs for undergraduate, master's and doctoral degrees. There are 54 master's degree options, 37 doctoral degree options including one specialist program, and 14 certificate options. | msu, undergraduate, graduate, master's, doctoral, phD, montana, institution, university |
is parent organization of: MSU Subzero Science and Engineering Research Core Facility is parent organization of: MSU Magnetic Resonance Core Laboratory is parent organization of: Montana State University, Department of Cell Biology and Neuroscience is parent organization of: Yogo Data Management System is parent organization of: NeuroSys Data Management System is parent organization of: MSU Paleohistology Core Laboratory is parent organization of: MSU Animal Resource Center is parent organization of: Montana State University Bioinformatics Core Facility is parent organization of: MSU FACS Core Laboratory is parent organization of: Montana State University Functional Genomics Core Facility is parent organization of: MSU Imaging and Chemical Analysis Core Laboratory is parent organization of: MSU Large animal BSL-2 is parent organization of: MSU Metabolomics Core Facility is parent organization of: MSU Microscopy Core Facility is parent organization of: MSU Proteomics Core Laboratory is parent organization of: MSU Research Computing Group is parent organization of: MSU Transmission Electron Microscopy Core Laboratory is parent organization of: MSU X-ray Crystallography Core Laboratory is parent organization of: Montana State University Labs and Facilities is parent organization of: Montana State University Mass Spectrometry Core Facility is parent organization of: Montana State University Research Cyberinfrastructure Core Facility is parent organization of: Montana State University Cellular Analysis Core Facility is parent organization of: Montana State University Social Data Collection and Analysis Services Core Facility is parent organization of: Montana State University Imaging and Chemical Analysis Laboratory Core Facility is parent organization of: Montana State University Cryo-EM Core Facility is parent organization of: Montana State University Nuclear Magnetic Resonance Core Facility is parent organization of: Montana State University Montana Microfabrication Core Facility is parent organization of: Montana State University Geospatial Core Facility is parent organization of: Montana State University Animal Resources Center Core Facility is parent organization of: Montana State University CBE Bioimaging and Analytical Core Facility is parent organization of: Montana State University Biophotonics Core Facility |
nlx_53872, ISNI:0000 0001 2156 6108, grid.41891.35, Crossref funder ID:100009501, Wikidata:Q1861687 | https://ror.org/02w0trx84 | SCR_000979 | SciCrunch Registry | Montana State University, Montana State University (MSU), Montana State | 2026-09-26 02:12:53 | 2 | |||||||
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International Institute of Molecular and Cell Biology; Warsaw; Poland Resource Report Resource Website 1+ mentions |
International Institute of Molecular and Cell Biology; Warsaw; Poland (RRID:SCR_000971) | IIMCB | institution | International Institute of Molecular and Cell Biology creates partnerships with research centers within and outside Poland. This organization provides a base of administration, management of finances and resources, sharing space and equipment, grant writing and grant management procedures, etc. They organize workshops, training courses, conferences and other scientific events for researchers of various specialties and nationalities. Additionally, this organization commercializes results to provide biotechnological solutions with regards to the global economy and global research services deals. | poland, warsaw, institution, administration, management, equipment, grant writing, grant management, commercial, biotechnology, global economy, global research, research center, partnership |
is parent organization of: MetaLocGramN is parent organization of: Modomics |
nlx_156957, grid.419362.b | https://ror.org/01y3dkx74 | SCR_000971 | SciCrunch Registry | International Institute of Molecular and Cell Biology, International Institute of Molecular and Cell Biology (IIMCB) | 2026-09-26 02:12:53 | 1 | |||||||
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Indian Institute of Science; Bangalore; India Resource Report Resource Website |
Indian Institute of Science; Bangalore; India (RRID:SCR_000969) | IISc | institution | A public research university for science and higher education in India. The university has six main divisions, including the biological sciences, chemical sciences, electrical sciences, mechanical sciences, physical and mathematical sciences, and interdisciplinary research. | university, science institute, higher education |
is parent organization of: SUPFAM is parent organization of: CADB - Conformational Angles DataBase of Proteins is parent organization of: MulPSSM is parent organization of: PALI- Phylogeny and Alignment of homologous protein str |
nlx_73023 | SCR_000969 | SciCrunch Registry | Indian Institute of Science | 2026-09-26 02:12:53 | 0 | ||||||||
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European Food Safety Authority Resource Report Resource Website 10+ mentions |
European Food Safety Authority (RRID:SCR_000963) | EFSA | nonprofit organization | A government granting agency which consults with partnered programs through national authorities and food safety agencies. EFSA organizes its annual and multi-annual work program according to priorities agreed with the European Commission and other partners, taking into account available resources. EFSA staff may also produce scientific outputs on behalf of the agency, such as peer reviews of the assessment of active substances in pesticides, or responses to urgent requests for advice. EFSA staff also monitor and analyze information and data on biological hazards, chemical contaminants, food consumption and emerging risks. | european, food safety, grants, granting agency, eu, regional funding resource | Wikidata: Q516521, nlx_157920, ISNI: 0000 0004 1792 4701, grid.483440.f | https://ror.org/056nc1c48 | SCR_000963 | SciCrunch Registry | 2026-09-26 02:12:53 | 11 | |||||||||
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Temple University School of Medicine, Department of Neuroscience Resource Report Resource Website |
Temple University School of Medicine, Department of Neuroscience (RRID:SCR_000720) | university | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 14,2025. A department within the Temple University School of Medicine, which focuses on the education and research. This organization also hosts seminar series in neuroscience, sponsors annual lectures in neuroscience, and organizes bi-annual one-day workshops. This department has collaborative projects with researchers from the microbiology, immunology, pharmacology, radiology and the center for substance abuse research departments. | neuroscience, annual lecture, workshops, seminar, education, research | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-02090 | SCR_000720 | SciCrunch Registry | 2026-09-26 02:12:51 | 0 | ||||||||||
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ETH Zurich; Zurich; Switzerland Resource Report Resource Website |
ETH Zurich; Zurich; Switzerland (RRID:SCR_000962) | ETH | university | Public institute of technology in Zurich, Switzerland that specializes in science, technology, mathematics and management. École Polytechnique Fédérale de Lausanne is its sister university. | public, institute, technology, zurich, switzerland, science, mathematics, management |
uses: DataCite uses: Sparrho is parent organization of: QuakeML is parent organization of: HelioScan is parent organization of: ShoRAH is parent organization of: openBIS is parent organization of: OMA Browser is parent organization of: Connectome Wiki is parent organization of: Society in Science - The Branco Weiss Fellowship is parent organization of: Tscratch is parent organization of: SIPEC |
nlx_143698 | http://www.ethz.ch/index_EN | SCR_000962 | SciCrunch Registry | ETH Zürich, Eidgenössische Technische Hochschule Zürich, Eidgenossische Technische Hochschule Zurich, ETH Zurich, Swiss Federal Institute of Technology Zurich | 2026-09-26 02:12:53 | 0 | |||||||
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Baylor College of Medicine - Shaw Laboratory Resource Report Resource Website 1+ mentions |
Baylor College of Medicine - Shaw Laboratory (RRID:SCR_000604) | BCM - Shaw Laboratory, BCM Shaw Laboratory, BCM Shaw Lab | data or information resource, laboratory portal, organization portal, portal | The mission of the Baylor College of Medicine - Shaw Laboratory is to apply methods of statistics and bioinformatics to the analysis of large scale genomic data. Our vision is data integration to reveal the underlying connections between genes and processes in order to cure disease and improve healthcare. | statistics, bioinformatics, analysis, genomic, gene, biological process | has parent organization: Baylor University; Texas; USA | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_149156 | SCR_000604 | SciCrunch Registry | 2026-09-26 02:12:49 | 1 | ||||||||
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USP Molecular Genetics and Bioinformatics Laboratory Resource Report Resource Website 1+ mentions |
USP Molecular Genetics and Bioinformatics Laboratory (RRID:SCR_000605) | USP Molecular Genetics and Bioinformatics Laboratory | data or information resource, laboratory portal, organization portal, portal | Laboratory portal of the University of Sao Paulo Molecular Genetics and Bioinformatic Laboratory. | genetics, bioinformatics, data mining, genome, gene | has parent organization: University of Sao Paulo; Sao Paulo; Brazil | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_149158 | SCR_000605 | SciCrunch Registry | University of Sao Paulo Molecular Genetics and Bioinformatic Laboratory, USP Laboratorio de Genetica Molecular e Bioinformatica, University of Sao Paulo Molecular Genetics and Bioinformatics Laboratory, USP Molecular Genetics Bioinformatics Laboratory, USP Molecular Genetics and Bioinformatic Laboratory | 2026-09-26 02:12:49 | 1 | |||||||
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Indian Council of Medical Research; New Delhi; India Resource Report Resource Website 10+ mentions |
Indian Council of Medical Research; New Delhi; India (RRID:SCR_000968) | ICMR | institution | A government-funded council for the promotion and coordination of biomedical research in India. The council focuses on specific diseases such as HIV/AIDS, tuberculosis, and leprosy in addition to national health priorities including the management of communicable diseases, fertility control, and mental health research. | medical, biomedical, research, government, national, tuberculosis, hiv, aids, leprosy, communicable, disease, fertility, mental health | is parent organization of: National Institute of Medical Statistics; New Delhi; India | HIV/AIDS, Tuberculosis, Leprosy | Government of India through the Department of Health Research Ministry of Health and Family Welfare | Wikidata: Q291019, grid.19096.37, Crossref funder ID: 501100001411, ISNI: 0000 0004 1767 225X, nlx_151509 | https://ror.org/0492wrx28 | SCR_000968 | SciCrunch Registry | 2026-09-26 02:12:53 | 26 | ||||||
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University of Miami, Department of Neuroscience Resource Report Resource Website |
University of Miami, Department of Neuroscience (RRID:SCR_000723) | university | A department within the University of Miami which offers both undergraduate and postgraduate programs in neuroscience. The graduate program provides neuroscience research training in biological, behavioral, and physical sciences. This organization also conducts research through 55 active laboratories. | undergraduate, postgraduate, biological, behavioral, physical, research, educations | nif-0000-02209 | SCR_000723 | SciCrunch Registry | 2026-09-26 02:12:51 | 0 | |||||||||||
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Fudan University; Shanghai; China Resource Report Resource Website |
Fudan University; Shanghai; China (RRID:SCR_000965) | university | A public university in Shanghai, China that confers undergraduate and graduate degrees. | public, shanghai, china, university, undergraduate, graduate |
is parent organization of: Cancer Center Tissue Bank - Fudan University is parent organization of: PBmice is parent organization of: Sno/scaRNAbase is parent organization of: Intergrated Transcription Factor Platform is parent organization of: inGAP |
nlx_86135, Wikidata:Q495015, grid.8547.e, Crossref funder ID:501100003347, ISNI:0000 0001 0125 2443 | https://ror.org/013q1eq08 | SCR_000965 | SciCrunch Registry | 2026-09-26 02:12:53 | 0 | |||||||||
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Cardiovascular Proteomics Center Resource Report Resource Website |
Cardiovascular Proteomics Center (RRID:SCR_000603) | CPC, BUSM CPC | data or information resource, portal, topical portal | The Cardiovascular Proteomics Center is a research center funded by the NIH/NHLBI to analyze and identify proteins that may be modified or created by oxidative stress. The CPC is developing and applying new proteomics methodology and instrumentation to the analysis of known proteins and those yet to be discovered. | protein, cardiovascular, proteomics, heart, oxidative stress, mass spectrometry, biology, clinical | has parent organization: Boston University School of Medicine; Massachusetts; USA | NHLBI N01HV28178-12-0-1 | nlx_149148 | SCR_000603 | SciCrunch Registry | BUSM Cardiovascular Proteomics Center, Boston University School of Medicine Cardiovascular Proteomics Center, BU Cardiovascular Proteomics Center | 2026-09-26 02:12:49 | 0 | |||||||
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Skylign Resource Report Resource Website 10+ mentions |
Skylign (RRID:SCR_001176) | Skylign | analysis service resource, data analysis service, production service resource, service resource, software resource | A tool for creating logos representing both sequence alignments and profile hidden Markov models. The interactive logos enable scrolling, zooming, and inspection of underlying values. Skylign can avoid sampling bias in sequence alignments by down-weighting redundant sequences and by combining observed counts with informed priors. It also simplifies the representation of gap parameters, and can optionally scale letter heights based on alternate calculations of the conservation of a position. | sequence alignment, profile, logo, bio.tools |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian has parent organization: Janelia Research |
PMID:24410852 | Creative Commons Attribution License, v3 Unported | biotools:skylign, OMICS_02182 | https://bio.tools/skylign | SCR_001176 | SciCrunch Registry | Skylign - Interactive logos for alignments and profile HMMs | 2026-09-26 02:12:55 | 13 | |||||
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sRAP Resource Report Resource Website 10+ mentions |
sRAP (RRID:SCR_001297) | sRAP | software resource | Software package that provides a pipeline for gene expression analysis (primarily for RNA-Seq data). The normalization function is specific for RNA-Seq analysis, but all other functions (Quality Control Figures, Differential Expression and Visualization, and Functional Enrichment via BD-Func) will work with any type of gene expression data. | gene expression, differential expression, go, gene set enrichment, microarray, preprocessing, quality control, rna-seq, statistical method, visualization |
is listed by: OMICtools has parent organization: Bioconductor |
Free, Available for download, Freely available | OMICS_02038 | http://www.bioconductor.org/packages/release/bioc/html/sRAP.html | SCR_001297 | SciCrunch Registry | Simplified RNA-Seq Analysis | 2026-09-26 02:12:57 | 16 | ||||||
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yaqcaffy Resource Report Resource Website 1+ mentions |
yaqcaffy (RRID:SCR_001295) | yaqcaffy | software resource | Software package for quality control of Affymetrix GeneChip expression data and reproducibility analysis of human whole genome chips with the MAQC reference datasets. | microarray, one channel, quality control, report writing, affymetrix, gene expression, bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools has parent organization: Bioconductor |
Free, Available for download, Freely available | BioTools:yaqcaffy, biotools:yaqcaffy, OMICS_02040 | http://www.bioconductor.org/packages/release/bioc/html/yaqcaffy.html | SCR_001295 | SciCrunch Registry | yaqcaffy - Affymetrix expression data quality control and reproducibility analysis | 2026-09-26 02:12:57 | 3 | ||||||
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Northwestern University Feinberg School of Medicine; Illinois; USA Resource Report Resource Website |
Northwestern University Feinberg School of Medicine; Illinois; USA (RRID:SCR_001058) | FSM | university | Medical school of Northwestern University which focuses on research initiatives, clinical affiliates, and global outlook. | University, medical school, med school, northwestern, research, clinical, residency |
is related to: Alzheimers Disease Genetics Consortium has parent organization: Northwestern University; Illinois; USA is parent organization of: Northwestern University Cognitive Neurology and Alzheimers Disease Center is parent organization of: Northwestern University Feinberg School of Medicine Center for Advanced Microscopy and Nikon Imaging Center Core Facility is parent organization of: GuPPy is parent organization of: Northwestern University School of Medicine SBDRC Translating Experimental Skin Testing with Immune Tracing, Informatics, and Technology Core Facility is parent organization of: Northwestern University School of Medicine SBDRC Gene Editing, Transduction and Nanotechnology Core Facility is parent organization of: Northwestern University School of Medicine SBDRC Skin Tissue Engineering and Morphology Core Facility |
nlx_41572 | SCR_001058 | SciCrunch Registry | Northwestern University Feinberg School of Medicine, Northwestern University FSM, Northwestern University Medical School | 2026-09-26 02:12:54 | 0 | ||||||||
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Princeton University; New Jersey; USA Resource Report Resource Website 1+ mentions |
Princeton University; New Jersey; USA (RRID:SCR_001059) | university | A private Ivy League research university based in New Jersey that confers undergraduate and graduate degrees in the humanities, social sciences, natural sciences, and engineering. It offers professional degrees in international affairs, engineering and applied science, architecture, and finance | private, ivy league, research, new jersey, undergraduate program resource, graduate program resource |
uses: Bioz is related to: Concavity is related to: Conservation is related to: Microns Explorer is parent organization of: GOLEM An interactive, graphical gene-ontology visualization, navigation, and analysis tool is parent organization of: MouseNET is parent organization of: Human Experimental/FunctionAL MaPper: Providing Functional Maps of the Human Genome is parent organization of: MSG is parent organization of: bioPIXIE is parent organization of: PILGRM is parent organization of: mouseMAP is parent organization of: SMD is parent organization of: Generic GO Term Mapper is parent organization of: Biological General Repository for Interaction Datasets (BioGRID) is parent organization of: Ciliate IES-MDS database is parent organization of: Generic GO Term Finder is parent organization of: New Immigrant Survey is parent organization of: MEFIT is parent organization of: CCAT (Combinatorial Code Analysis Tool) is parent organization of: Princeton University Labs and Facilities is parent organization of: Princeton High Throughput Sequencing and Microarray Facility is parent organization of: Brain Imaging Analysis Kit is parent organization of: Java Treeview is parent organization of: PathwayNet is parent organization of: Flywire.ai is parent organization of: Social LEAP is parent organization of: SLEAP, LEAP and MotionMapper project is parent organization of: MotionMapper is parent organization of: WordNet is parent organization of: MAVEN is parent organization of: Princeton University Chemistry Core Facility is parent organization of: Codex |
nlx_16293 | SCR_001059 | SciCrunch Registry | Princeton University | 2026-09-26 02:12:54 | 2 | |||||||||
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University of Illinois College of Medicine; Illinois; USA Resource Report Resource Website |
University of Illinois College of Medicine; Illinois; USA (RRID:SCR_001057) | university | The medical school division of the University of Illinois with four separate campuses. The school focuses on excellence in research, education and clinical work, diversity and innovation, and collaboration. | medicine, university, chicago, illinois, medical school, residency, professional program |
is affiliated with: Big Ten Cancer Research Consortium has parent organization: University of Illinois at Chicago; Illinois; USA is parent organization of: University Andrology Laboratory |
nlx_40705 | SCR_001057 | SciCrunch Registry | University of Illinois at Chicago College of Medicine, UIC College of Medicine, University of Illinois at Chicago College of Medicine; Illinois; USA, University of Illinois College of Medicine at Chicago | 2026-09-26 02:12:54 | 0 | |||||||||
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SNM Resource Report Resource Website 1+ mentions |
SNM (RRID:SCR_001299) | SNM | software resource | Software package that uses a modeling strategy especially designed for normalizing high-throughput genomic data. The premise is that your data is a function of study-specific variables which are either biological variables that represent the target of the statistical analysis, or adjustment variables that represent factors arising from the experimental or biological setting the data is drawn from. The SNM approach aims to simultaneously model all study-specific variables in order to more accurately characterize the biological or clinical variables of interest. | differential expression, exon array, gene expression, microarray, multi channel, multiple comparison, one channel, preprocessing, quality control, transcription, two channel |
is listed by: OMICtools has parent organization: Bioconductor |
Free, Available for download, Freely available | OMICS_02036 | SCR_001299 | SciCrunch Registry | Supervised Normalization of Microarrays | 2026-09-26 02:12:57 | 1 |
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