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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Aging Portal Resource Report Resource Website |
Aging Portal (RRID:SCR_000496) | Aging | catalog, data or information resource, database, portal, topical portal | Portal devoted to aging relevant scientific data and resources. | late adult human, senescence |
uses: Aging Genes and Interventions Database uses: anage uses: Human Life-Table Database uses: Gene Ontology uses: Grants.gov uses: Integrated Blogs uses: Integrated Clinical Trials uses: Integrated Videos uses: Integrated Grants uses: Lifespan Observations Database uses: One Mind Biospecimen Bank Listing uses: Gait in Parkinson's Disease uses: SciCrunch Registry has parent organization: SciCrunch |
Aging | NIA 1R03AG043018-01 | Restricted | nlx_158366 | SCR_000496 | SciCrunch Registry | 2026-09-26 02:12:48 | 0 | ||||||
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Bio-derived Feedstocks for Sustainable UK-Based Manufacture of Chemicals and Pharmaceutical Intermediates Resource Report Resource Website |
Bio-derived Feedstocks for Sustainable UK-Based Manufacture of Chemicals and Pharmaceutical Intermediates (RRID:SCR_000490) | BFSUKMCPI | consortium, data or information resource, organization portal, portal | Project aiming to establish a range of new technologies to enable the synthesis of a range of chemicals from sugar beet pulp (SBP) in a cost-effective and sustainable manner. The chemical and pharmaceutical industries are currently reliant on petrochemical derived intermediates for the synthesis of a wide range of valuable products. Decreasing petrochemical reserves and concerns over costs and greenhouse gas emissions are driving the search for renewable sources of organic synthons. The UK is self-sufficient in the production of SBP which is a by-product of sugar beet production (8 million tonnes grown per year) and processing. The ability to convert SBP into chemicals and pharmaceutical intermediates will therefore have significant economic and environmental benefits. SBP is rich in carbohydrate (nearly 80% by weight) which is made up of roughly equal proportions of 2 biological polymers; cellulose and pectin. To be cost-effective it will be necessary to find uses for each of these substances. The consortium will develop a biorefinery approach for the selective breakdown of both polymers, purification of the breakdown compounds and their use to synthesize a range of added value products such as speciality chemicals, pharmaceuticals and biodegradable polymers. It is already known that cellulose can be broken down into hexose sugars and fermented to ethanol for use in biofuels. The focus is on the release of galacturonic acid and arabinose (from pectin) and their conversion, by chemical or enzymatic means, into added value products. Synthetic Biology methods will also be explored to test the feasibility of metabolically engineering microbial cells to simultaneously breakdown the polymeric feed material and synthesize a desired product, such as aromatic compounds, in a single integrated process. In conducting this research the consortium will adopt a holistic, systems-led, approach to biorefinery design and operation. Computer-based modelling tools will be used to assess the efficiency of raw material, water and energy utilization. Economic and Life Cycle Analysis (LCA) approaches will then be employed to identify the most cost-effective and environmentally benign product and process combinations. The project is supported by a range of industrial partners from raw material producer to intermediate technology providers and end-user chemical and pharmaceutical companies. This is crucial in providing business and socio-economic insights regarding the adoption of renewable resources into their current product portfolios. The company partners will also provide the material and equipment resources for the large-scale verification of project outcomes and their ultimate transition into commercial manufacture. The Intellectual Property (IP) expected to be generated by the consortium will most likely be related to new biocatalysts, synthetic routes, USD devices and modelling software. The data is accessible programmatically using one of three application programming interfaces GtR, GtR-2 and CERIF. | chemical, drug, drug development, pharmaceutical, manufacture, product development, sugar beet pulp, sugar beet, polymer, galacturonic acid, arabinose, biorefinery, cellulose, pectin, ethanol, biofuel |
is listed by: Consortia-pedia has parent organization: University College London; London; United Kingdom |
EPSRC | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_158450 | SCR_000490 | SciCrunch Registry | 2026-09-26 02:12:48 | 0 | |||||||
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Allegheny College; Pennsylvania; USA Resource Report Resource Website |
Allegheny College; Pennsylvania; USA (RRID:SCR_000369) | university | A private liberal arts college that offers degrees in social sciences, humanities and natural sciences at the undergraduate level. | private, liberal arts, social science, humanities, natural sciences, undergraduate | is parent organization of: Allegheny College Neuroscience | nlx_40570 | SCR_000369 | SciCrunch Registry | 2026-09-26 02:12:46 | 0 | ||||||||||
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NucleoFinder Resource Report Resource Website 1+ mentions |
NucleoFinder (RRID:SCR_000368) | NucleoFinder | software resource | A software for a statistical approach for the detection of nucleosome positions in a cell population. The software identifies important features of nucleosome organization such as the spacing downstream of active promoters and the enrichment and depletion of GC/AT dinucleotides of in vitro nucleosomes. | nucleusome, position, promoter, analysis, downstream, nucleotide, bio.tools |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian |
PMID:23297036 | THIS RESOURCE IS NO LONGER IN SERVICE | biotools:nucleofinder, OMICS_00510 | https://omictools.com/nucleofinder-tool, https://bio.tools/nucleofinder | SCR_000368 | SciCrunch Registry | 2026-09-26 02:12:46 | 1 | ||||||
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WILEY Interdisciplinary Reviews Resource Report Resource Website |
WILEY Interdisciplinary Reviews (RRID:SCR_000392) | WIREs | data or information resource, portal, topical portal | Wiley Interdisciplinary Reviews series combines features of encyclopedic reference works and review journals in innovative online format. They are designed to promote cross-disciplinary research ethos while maintaining the highest scientific and presentational standards, but should be viewed first and foremost as evolving online databases of cutting-edge reviews. | encyclopedic reference works, review journals, databases of reviews, | nif-0000-10668 | http://www.wiley.com/WileyCDA/Section/id-370078.html | SCR_000392 | SciCrunch Registry | Wiley Interdisciplinary Reviews series | 2026-09-26 02:12:46 | 0 | ||||||||
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QUALIFIER Resource Report Resource Website |
QUALIFIER (RRID:SCR_000389) | software resource | Software that provides quality control and quality assessment tools for gated flow cytometry data. | software package, mac os x, unix/linux, windows, r, cell based assay, flow cytometry, infrastructure |
is listed by: OMICtools has parent organization: Bioconductor |
PMID:23020243 | THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_05618 | SCR_000389 | SciCrunch Registry | QUALIFIER - Quality Control of Gated Flow Cytometry Experiments | 2026-09-26 02:12:46 | 0 | |||||||
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oneClickCGH Resource Report Resource Website |
oneClickCGH (RRID:SCR_000294) | oneClickCGH | data analysis software, data processing software, software application, software resource | Platform-independent array copy number analysis software that provides straightforward yet comprehensive detection and reporting of copy number changes. | array, comparative genomic hybridization, cytogenetics, copy number variant, copy number analysis, | is listed by: OMICtools | Restricted | OMICS_02050 | SCR_000294 | SciCrunch Registry | 2026-09-26 02:12:45 | 0 | ||||||||
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fqzcomp Resource Report Resource Website 1+ mentions |
fqzcomp (RRID:SCR_000299) | fqzcomp | software resource | A basic fastq compressor, designed primarily for high performance. | c++ |
is listed by: OMICtools has parent organization: SourceForge |
PMID:23533605 | Free, Available for download, Freely available | OMICS_00957 | SCR_000299 | SciCrunch Registry | 2026-09-26 02:12:45 | 1 | |||||||
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Indeed Resource Report Resource Website 1+ mentions |
Indeed (RRID:SCR_000292) | Indeed | job resource | A database of job listings | employment, career |
is used by: NIF Data Federation is related to: Integrated Jobs |
nlx_144165 | SCR_000292 | SciCrunch Registry | Indeed.com, indeed: one search. all jobs | 2026-09-26 02:12:45 | 2 | ||||||||
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HighWire Press Resource Report Resource Website 1+ mentions |
HighWire Press (RRID:SCR_000761) | data or information resource, database, publisher, service resource | A division of the Stanford University Libraries, which produces the online versions of journals and other scholarly content. | biomedical, communication, images, interactivity, literature, multimedia, science, scientific, scientific literature databases and services, technology |
is listed by: OMICtools has parent organization: Stanford University; Stanford; California |
THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-21191 | SCR_000761 | SciCrunch Registry | HighWire Press | 2026-09-26 02:12:51 | 6 | ||||||||
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Harvard Partners HealthCare Center for Personalized Genetic Medicine Bioinformatics Core Facility Resource Report Resource Website |
Harvard Partners HealthCare Center for Personalized Genetic Medicine Bioinformatics Core Facility (RRID:SCR_000882) | access service resource, analysis service resource, core facility, production service resource, service resource | Core to provide gene expression data analysis service. Activities range from the provision of services to fully collaborative grant funded investigations. | affymetrix, array, PCPGM, gene, expression, data, analysis, service |
is listed by: Eagle I has parent organization: Harvard University; Cambridge; United States |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_156324 | http://www.partners.org/researchcores/trash/bioinformatics_HPCGG.html | SCR_000882 | SciCrunch Registry | PCPGM, bioinformatics, The Partners HealthCare Center for Personalized Genetic Medicine | 2026-09-26 02:12:52 | 0 | |||||||
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University of Neurosurgery Webinar Series Resource Report Resource Website |
University of Neurosurgery Webinar Series (RRID:SCR_000639) | data or information resource, meeting resource, online course, training resource, video resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 6,2023. A series of of webinars offered directly to users' computers. The webinars are offered in a variety of subjects, including neurotrauma, spine, tumor and vascular. Each webinars costs $35 US and offers CME credit. | medical, webinar, neurotrauma, spine, tumor, vascular, cme credit, video resource | has parent organization: Congress of Neurological Surgeons | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-06723 | SCR_000639 | SciCrunch Registry | Congress of Neurological Surgeons Webinar Series, CNS Webinar Series | 2026-09-26 02:12:50 | 0 | ||||||||
|
Neo Resource Report Resource Website 10+ mentions |
Neo (RRID:SCR_000634) | neo | software resource | A Python package for representing electrophysiology data, together with support for reading a wide range of neurophysiology file formats, including Spike2, NeuroExplorer, AlphaOmega, Axon, Blackrock, Plexon, Tdt, and support for writing to a subset of these formats plus non-proprietary formats including HDF5. The goal of Neo is to improve interoperability between Python tools for analyzing, visualizing and generating electrophysiology data (such as OpenElectrophy, NeuroTools, G-node, Helmholtz, PyNN) by providing a common, shared object model. In order to be as lightweight a dependency as possible, Neo is deliberately limited to represention of data, with no functions for data analysis or visualization. Neo implements a hierarchical data model well adapted to intracellular and extracellular electrophysiology and EEG data with support for multi-electrodes (for example tetrodes). Neo's data objects build on the quantities package, which in turn builds on NumPy by adding support for physical dimensions. Thus Neo objects behave just like normal NumPy arrays, but with additional metadata, checks for dimensional consistency and automatic unit conversion. | neurophysiology, electrophysiology, python, interoperability, intracellular, extracellular, eeg, electrode |
is used by: Elephant is used by: OpenElectrophy is used by: NetworkUnit has parent organization: NeuralEnsemble |
PMID:24600386 | Free, Available for download, Freely available | nlx_151874 | SCR_000634 | SciCrunch Registry | 2026-09-26 02:12:50 | 18 | |||||||
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University of Dundee; Scotland; United Kingdom Resource Report Resource Website 1+ mentions |
University of Dundee; Scotland; United Kingdom (RRID:SCR_000997) | university | University in Scotland, UK that provides undergraduate and doctoral degree programs. | university, undergraduate, doctoral, phd, graduate |
is related to: Kinetics for Drug Discovery is related to: Aline is parent organization of: Phospho.ELM is parent organization of: MARCAR is parent organization of: OXBench is parent organization of: GOtcha is parent organization of: Jalview is parent organization of: Kinomer is parent organization of: Human Intermediate Filament Database is parent organization of: SNAPPI is parent organization of: OME - Open Microscopy Environment is parent organization of: University of Dundee College of Life Sciences; Scotland; United Kingdom is parent organization of: University of Dundee School of Medicine; Scotland; United Kingdom is parent organization of: NoPdb: Nucleolar Proteome Database is parent organization of: Research Data Management Platform |
Crossref funder ID:100008890, ISNI:0000 0004 0397 2876, grid.8241.f, Wikidata:Q1249005, nlx_76402 | https://ror.org/03h2bxq36 | SCR_000997 | SciCrunch Registry | University of Dundee | 2026-09-26 02:12:53 | 2 | ||||||||
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Tufts University; Massachusetts; USA Resource Report Resource Website 1+ mentions |
Tufts University; Massachusetts; USA (RRID:SCR_000994) | university | Private research university in Medford and Somerville, Massachusetts, United States, with additional facilities in Boston and Grafton, as well as Talloires, France. Provides undergraduate, graduate, and professional degree programs. | tufts, university, undergraduate, graduate, professional |
uses: LabArchives is related to: Clinical and Translational Science Awards Consortium is related to: LabArchives is parent organization of: Tissue Engineering Resource Center is parent organization of: Tufts University School of Medicine; Massachusetts; USA is parent organization of: Tufts University Graduate School of Biomedical Sciences Graduate Programs is parent organization of: DFLAT is parent organization of: Tufts University Labs and Facilities is parent organization of: Tufts University Core Facilities is parent organization of: FluCalc is parent organization of: Tufts University Genomics Core Facility is parent organization of: Tufts University Laser Cytometry Core Facility is parent organization of: Tufts University Comparative Pathology and Genomics Shared Resource Core Facility |
Crossref funder ID:100008090, ISNI:0000 0004 1936 7531, Wikidata:Q49120, nlx_38314, grid.429997.8 | https://ror.org/05wvpxv85 | SCR_000994 | SciCrunch Registry | Tufts University, Tufts | 2026-09-26 02:12:53 | 9 | ||||||||
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National Addiction and HIV Data Archive Program (NAHDAP) Resource Report Resource Website |
National Addiction and HIV Data Archive Program (NAHDAP) (RRID:SCR_000636) | NAHDAP | data or information resource, data repository, disease-related portal, portal, service resource, storage service resource, topical portal | Archive that acquires, preserves and disseminates data relevant to drug addiction and HIV research. Collection of data on drug addiction and HIV infection in United States. Most of datasets are raw data from surveys, interviews, and administrative records. They were originally gathered in research projects and for administrative purposes. Some datasets have been used in published studies. Bibliographies of these studies are available . Provides access to research data and technical assistance for data depositors. Provides e-workshops on data preparation and data systems. | drug addiction data, HIV infection data, |
uses: DataCite is used by: NIH Heal Project is recommended by: National Library of Medicine is recommended by: NIDDK Information Network (dkNET) is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases is listed by: re3data.org has parent organization: Inter-university Consortium for Political and Social Research (ICPSR) |
Addiction, Human immunodeficiency virus, HIV | NIDA ; Office of Behavioral and Social Sciences Research |
Restricted | nif-0000-06713, r3d100010261, DOI:10.3886 | https://doi.org/10.3886/, https://dx.doi.org/10.3886/, https://doi.org/10.17616/R3PK64 | SCR_000636 | SciCrunch Registry | , National Addiction & HIV DATA Archive Program, National Addiction HIV Data Archive Program, National Addiction and HIV DATA Archive Program, NAHDAP, National Addiction and HIV DATA Archive Program (NAHDAP), National Addiction & HIV DATA Archive Program (NAHDAP), ICPSR/NAHDP | 2026-09-26 02:12:50 | 0 | ||||
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Pasteur Institute of Lille; Lille; France Resource Report Resource Website 1+ mentions |
Pasteur Institute of Lille; Lille; France (RRID:SCR_000990) | institution | Pasteur Institute of Lille is an international research institute in Lille, France focused on bettering human health by detecting risk factors in degenerative diseases. | institute, france research, international research, lille research, human health, degenerative disease, risk factor |
is related to: AgedBrainSYSBIO is related to: International Genomics of Alzheimers Project has parent organization: Pasteur Institute is parent organization of: International Genomics of Alzheimers Project |
grid.8970.6, nlx_158125, ISNI: 0000 0001 2159 9858, Wikidata: Q3151788 | https://ror.org/05k9skc85 | SCR_000990 | SciCrunch Registry | Pasteur Institute of Lille, Pasteur Lille, Pasteur-Lille, Institut Pasteur de Lille | 2026-09-26 02:12:53 | 1 | ||||||||
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CAST Resource Report Resource Website 10+ mentions |
CAST (RRID:SCR_000628) | CAST | data analysis software, data processing software, sequence analysis software, software application, software resource | A novel algorithm for low-complexity region detection and selective masking. The algorithm is based on multiple-pass Smith-Waterman comparison of the query sequence against twenty homopolymers with infinite gap penalties. The output of the algorithm is both the masked query sequence for further analysis, e.g. database searches, as well as the regions of low complexity. | low-complexity region detection and selective masking, query sequence against twenty homopolymers, infinite gap penalties, masked query sequence, | has parent organization: University of Athens Biophysics and Bioinformatics Laboratory | European Molecular Biology Laboratory; Heidelberg; Germany ; European Union ; TMR Proramme ; IBM Research |
PMID:11120681 | nlx_151779 | http://www.ebi.ac.uk/research/cgg/services/cast/ | SCR_000628 | SciCrunch Registry | CAST - Compositional Bias Detection Algorithm | 2026-09-26 02:12:50 | 11 | |||||
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VISAGES Research Resource Report Resource Website 1+ mentions |
VISAGES Research (RRID:SCR_000749) | VisAGeS | data or information resource, organization portal, portal, topical portal | Research team focused on research and development of new algorithms in medical imaging, information processing and computer assisted intervention in the context of the pathologies of the central nervous system. Research team jointly affiliated to INSERM (National Institute of Health and Scientific Research), Inria (National Institute of Research in Computer Sciences and Automation) and IRISA / UMR CNRS 6074, University of Rennes I. Multidisciplinary team merging researchers in image processing and medical doctors. | team, image, processing, researcher, medical, doctor, development, algorithm, information, pathology, central, nervous, system |
is related to: Empenn has parent organization: University of Rennes 1; Rennes; France is parent organization of: Anima is parent organization of: Anima scripts |
Multiple Sclerosis, Epilepsy, Parkinson, Dementia, Stroke, Depression, Schizophrenia | nif-0000-10223 | https://www.irisa.fr/RA/D5/VISAGES/2015/visages2015.pdf | SCR_000749 | SciCrunch Registry | Vision Action and information manaGEment System in health, VisAGeS, VISAGES | 2026-09-26 02:12:51 | 5 | ||||||
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NIH Office of Research on Women's Health; Bethesda; Maryland Resource Report Resource Website 1+ mentions |
NIH Office of Research on Women's Health; Bethesda; Maryland (RRID:SCR_000986) | ORWH, NIH ORWH | funding resource | The Office of Research on Women's Health (ORWH) is part of the Office of the Director of NIH. ORWH works in partnership with the 27 NIH Institutes and Centers to ensure that women’s health research is part of the scientific framework at the NIH and throughout the scientific community. | funding resource, office of research, women, health, nih women, orwh, women health research |
has parent organization: NIH Office of the Director has plug in: National Finals Rodeo 2018 live stream |
nlx_152796 | http://orwh.od.nih.gov/research/fundingopportunities.asp | SCR_000986 | SciCrunch Registry | NIH Office of Research on Womens Health, NIH Office of Research on Women's Health | 2026-09-26 02:12:53 | 4 |
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