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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Denver University Department of Psychology Resource Report Resource Website |
Denver University Department of Psychology (RRID:SCR_000474) | data or information resource, department portal, organization portal, portal | The department of psychology at Denver University that offers degrees at the undergraduate, graduate and doctoral level. The doctoral programs have specializations such as Affect/Social, Child Clinical, Cognitive, and Developmental. | psychology, graduate, doctoral, affect, social, child, clinical, cognitive, developmental, neuroscience | has parent organization: University of Denver; Colorado; USA | nif-0000-01928 | SCR_000474 | SciCrunch Registry | DU Dept. of Psychology, University of Denver Department of Psychology | 2026-09-26 02:12:47 | 0 | |||||||||
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ContEst Resource Report Resource Website 1+ mentions |
ContEst (RRID:SCR_000595) | ContEst | software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 8,2025. A software tool (and method) for estimating the amount of cross-sample contamination in next generation sequencing data. | java, contamination, next-generation sequencing, bio.tools |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian has parent organization: Broad Institute |
PMID:21803805 | THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_01038, biotools:contest | https://bio.tools/contest | SCR_000595 | SciCrunch Registry | 2026-09-26 02:12:49 | 6 | ||||||
|
Jnomics Resource Report Resource Website |
Jnomics (RRID:SCR_000348) | software resource | A collection of cloud-scale DNA sequence analysis tools. | mapreduce |
is listed by: OMICtools has parent organization: SourceForge |
Free, Available for download, Freely available | OMICS_04074 | SCR_000348 | SciCrunch Registry | 2026-09-26 02:12:45 | 0 | |||||||||
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SpeedSeq Resource Report Resource Website 1+ mentions |
SpeedSeq (RRID:SCR_000469) | software resource | Software for a lightweight, flexible, and open source pipeline that identifies genomic variation (single nucleotide variants (SNVs), indels, and structural variants (SVs)). | standalone software |
is listed by: OMICtools has parent organization: University of Virginia; Virginia; USA |
Free, Available for download, Freely available | OMICS_04673 | SCR_000469 | SciCrunch Registry | 2026-09-26 02:12:47 | 7 | |||||||||
|
ABrowse Resource Report Resource Website 1+ mentions |
ABrowse (RRID:SCR_000345) | software resource | A genome browser framework which gives an open browsing experience, open data access, collaborative work support, and a framework to import annotations. Multiple data access approaches are supported for external platforms to retrieve data from ABrowse. This resource also contains an online user-space in which users can create, store and share comments, annotations and landmarks. | genome browser, collaborative work, open data access, collaborative work support, framework, import annotation |
is listed by: OMICtools is related to: Galaxy |
PMID:22222089 | Free, Available for download, Freely available | OMICS_00899 | SCR_000345 | SciCrunch Registry | 2026-09-26 02:12:45 | 4 | ||||||||
|
Health Level Seven International Resource Report Resource Website |
Health Level Seven International (RRID:SCR_000466) | HL7 | institution | ANSI-accredited standards developing organization providing a comprehensive framework and related standards for the exchange, integration, sharing, and retrieval of electronic health information that supports clinical practice and the management, delivery and evaluation of health services. HL7's 2,300+ members include approximately 500 corporate members who represent more than 90% of the information systems vendors serving healthcare. HL7 provides standards for interoperability that improve care delivery, optimize workflow, reduce ambiguity and enhance knowledge transfer among all of their stakeholders, including healthcare providers, government agencies, the vendor community, fellow SDOs and patients. | health care, interoperability, health, health service, clinical, management | is parent organization of: Health Level Seven Reference Implementation Model Version 3 | nlx_157307, Wikidata: Q17054989, grid.434932.b | https://ror.org/029ga8k16 | SCR_000466 | SciCrunch Registry | 2026-09-26 02:12:47 | 0 | ||||||||
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MPscan Resource Report Resource Website |
MPscan (RRID:SCR_000587) | MPscan | data access protocol, software resource, web service | Web tool for index free mapping of multiple short reads on a genome. | linux, macos, next-generation sequencing, genome, bio.tools |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian has parent organization: ATGC: Montpellier bioinformatics platform |
Free, Available for download, Freely available | biotools:mpscan, OMICS_00670 | https://bio.tools/mpscan | SCR_000587 | SciCrunch Registry | MPscan: index free mapping of multiple short reads on a genome | 2026-09-26 02:12:49 | 0 | ||||||
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GPViz Resource Report Resource Website |
GPViz (RRID:SCR_000346) | GPViz | software resource | A versatile Java-based software used for dynamic gene-centered visualization of genomic regions and/or variants. | gene, visualization, genomic, variant, bioinformatics, java | is listed by: OMICtools | Free, Available for download, Freely available | OMICS_00915 | SCR_000346 | SciCrunch Registry | 2026-09-26 02:12:45 | 0 | ||||||||
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TEDDY Resource Report Resource Website 1+ mentions |
TEDDY (RRID:SCR_000383) | TEDDY | clinical trial, consortium, data or information resource, database, organization portal, portal | International consortium of six centers assembled to participate in the development and implementation of studies to identify infectious agents, dietary factors, or other environmental agents, including psychosocial factors, that trigger type 1 diabetes in genetically susceptible people. The coordinating centers recruit and enroll subjects, obtaining informed consent from parents prior to or shortly after birth, genetic and other types of samples from neonates and parents, and prospectively following selected neonates throughout childhood or until development of islet autoimmunity or T1DM. The study tracks child diet, illnesses, allergies and other life experiences. A blood sample is taken from children every 3 months for 4 years. After 4 years, children will be seen every 6 months until the age of 15 years. Children are tested for 3 different autoantibodies. The study will compare the life experiences and blood and stool tests of the children who get autoantibodies and diabetes with some of those children who do not get autoantibodies or diabetes. In this way the study hopes to find the triggers of T1DM in children with higher risk genes. | consortium, gene, infectious agent, dietary factor, environmental factor, young human, insulin, child, pediatric, autoantibody, blood, stool, biomaterial supply resource, longitudinal, neonate, parent, genetic risk, genetic factor, observation, prospective, serum, plasma, peripheral blood mononuclear cell, saliva, nasal swab, nail clipping, water, dna, virus, nutrition, toxic agent, socioeconomic, psychosocial, male, female, environment, exposure, diet, toxin, infectious agent, bacterial, viral, immunization |
is listed by: One Mind Biospecimen Bank Listing is listed by: ClinicalTrials.gov is listed by: NIDDK Information Network (dkNET) is listed by: NIDDK Central Repository is related to: Teddy study IA prediction has parent organization: University of South Florida; Florida; USA |
Type 1 diabetes, Diabetes | NIDDK 2UC4DK063829 | PMID:21564455 | nlx_152857 | SCR_000383 | SciCrunch Registry | The Environmental Determinants of Diabetes in the Young, TEDDY study | 2026-09-26 02:12:46 | 3 | |||||
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Trans-Institute Angiogenesis Research Program Resource Report Resource Website |
Trans-Institute Angiogenesis Research Program (RRID:SCR_000384) | TARP | data or information resource, portal, resource, topical portal | Trans-NIH program encouraging and facilitating the study of the underlying mechanisms controlling blood vessel growth and development. Other aims include: to identify specific targets and to develop therapeutics against pathologic angiogenesis in order to reduce the morbidity due to abnormal blood vessel proliferation in a variety of disease states; to better understand the process of angiogenesis and vascularization to improve states of decreased vascularization; to encourage and facilitate the study of the processes of lymphangiogenesis; and to achieve these goals through a multidisciplinary approach, bringing together investigators with varied backgrounds and varied interests. | blood vessel, growth, development, target, therapeutic, vascularization, angiogenesis, lymphangiogenesis |
is listed by: NIDDK Information Network (dkNET) has parent organization: National Institutes of Health |
Angiogenesis, Lymphangiogenesis | JDRF ; NEI ; NHLBI ; NCI ; NICHD ; NIDDK ; NINDS |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_152866 | SCR_000384 | SciCrunch Registry | Trans-Institute Angiogenesis Research Program (TARP) | 2026-09-26 02:12:46 | 0 | |||||
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SunnyLab Resource Report Resource Website |
SunnyLab (RRID:SCR_000382) | commercial organization | An antibody supplier that provides a range of human antigens, serum and plasma, and cell culture reagents. | antibody, antigen, reagent, serum, plasma, culture, commercial | Commercially available | nlx_152472 | SCR_000382 | SciCrunch Registry | 2026-09-26 02:12:46 | 0 | ||||||||||
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University of Massachusetts; Massachusetts; USA Resource Report Resource Website 1+ mentions |
University of Massachusetts; Massachusetts; USA (RRID:SCR_000379) | UMass | university | A five-campus public university system in Massachusetts. The system includes four universities, a medical school, and a satellite campus. | public, university, system, boston, massachusetts, medicine |
is related to: Beta Cell Biology Consortium is parent organization of: University of Massachusetts Amherst; Massachusetts; USA is parent organization of: University of Massachusetts Lowell; Massachusetts; USA is parent organization of: University of Massachusetts Medical School; Massachusetts; USA is parent organization of: University of Massachusetts Chan Medical School Metabolomics Core Facility is parent organization of: University of Massachusetts Flow Cytometry Core Facility is parent organization of: University of Massachusetts Chan Medical School BioImage Data Management and Sharing Core Facility is parent organization of: University of Massachusetts UMass Boston-Biophysical Instrumentation Core Facility is parent organization of: University of Massachusetts Amherst Animal Models Core Facility |
GRID grid.266684.8, ISNI 0000 0001 2184 9220, nlx_18192, Wikidata Q1061122 | https://ror.org/0260j1g46 | SCR_000379 | SciCrunch Registry | University of Massachusetts System, UMass, University of Massachusetts | 2026-09-26 02:12:46 | 2 | |||||||
|
Tianjin University; Tianjin; China Resource Report Resource Website |
Tianjin University; Tianjin; China (RRID:SCR_000372) | TJU | university | A national university in China with degree programs that include engineering, economics, humanities, law and art at the undergraduate, graduate and doctoral level. | china, national university, engineering, economics, law, humanities, doctoral, undergraduate, graduate |
is parent organization of: DEG - Database of Essential Genes is parent organization of: Greglist is parent organization of: QTLbase |
grid.33763.32, Crossref funder ID:501100004517, Wikidata:Q2031560, nlx_28979, ISNI:0000 0004 1761 2484 | https://ror.org/012tb2g32 | http://www.tju.edu.cn/english/ | SCR_000372 | SciCrunch Registry | TJU | 2026-09-26 02:12:46 | 0 | ||||||
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Exonhit Therapeutics Resource Report Resource Website |
Exonhit Therapeutics (RRID:SCR_000493) | commercial organization | A drug and diagnostic discovery company. | drug, diagnostic, in vitro | is related to: PharmaCog | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_158329 | SCR_000493 | SciCrunch Registry | Diaxonhit, Exonhit Therapeutics SA, ExonHit Therapeutics S.A. | 2026-09-26 02:12:48 | 0 | ||||||||
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Tuskegee University; Alabama; USA Resource Report Resource Website |
Tuskegee University; Alabama; USA (RRID:SCR_000373) | university | A private, historically black university that offers degree programs at the undergraduate, graduate, doctoral and professional levels. The university has programs that include veterinarian studies, allied health, nursing, education | tuskegee, alabama, private, historically black, doctoral, professional, veterinarian |
is parent organization of: Tuskegee Center for Biomedical Research - Digital Imaging is parent organization of: Tuskegee Center for Biomedical Research Shared Instrumentation Core is parent organization of: Tuskegee University Computational Biology and Bioinformatics - Biomedical Information Management Services |
nlx_156108, ISNI:0000 0001 0707 9354, Wikidata:Q1682329, grid.265253.5 | https://ror.org/0137n4m74 | SCR_000373 | SciCrunch Registry | Tuskegee University | 2026-09-26 02:12:46 | 0 | ||||||||
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London School of Economics and Political Science; London; United Kingdom Resource Report Resource Website |
London School of Economics and Political Science; London; United Kingdom (RRID:SCR_000370) | LSE | university | A public research university in London with an emphasis in social science degree programs such as law, mathematics, public affairs and international history. The university offers degrees at the undergraduate, graduate and doctoral level. | social science, humanities, economics, undergraduate, graduate, postdoctoral, research | nlx_158056 | SCR_000370 | SciCrunch Registry | London School of Economics and Political Science, London School of Economics | 2026-09-26 02:12:46 | 0 | |||||||||
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Tel Aviv University; Ramat Aviv; Israel Resource Report Resource Website |
Tel Aviv University; Ramat Aviv; Israel (RRID:SCR_000371) | university | A public university in Israel with degree programs in areas such as arts, engineering, humanities, the law and medicine at the undergraduate and graduate level. The university has affiliated but independent schools that focus on specific areas such as music, environmental studies, dentistry, social work, education and neuroscience. | israel, public, engineering, law, humanities, dentistry, social work, education, neuroscience, environment, music, medicine |
is related to: AgedBrainSYSBIO is parent organization of: MODENT - A Tool For Reconstructing Gene Regulatory Networks is parent organization of: ConSurf Database is parent organization of: HYDEN is parent organization of: TranspoGene is parent organization of: FlexProt: flexible protein alignment is parent organization of: Network-based Prediction of Human Tissue-specific Metabolism is parent organization of: ConSurf Database is parent organization of: RsiteDB- RNA binding sites database is parent organization of: Cross-Sectional and Longitudinal Aging Study is parent organization of: SPIKE |
nlx_45243 | SCR_000371 | SciCrunch Registry | TAU | 2026-09-26 02:12:46 | 0 | |||||||||
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Lonza Resource Report Resource Website 500+ mentions |
Lonza (RRID:SCR_000377) | Lonza | commercial organization | A supplier of various biochemical products for research in pharmacy and biotechnology as well as the specialty ingredients market. Examples of products include active pharmaceutical ingredients, stem cell therapies, drinking water sanitizers and agriculture services and products. | supplier, biomaterial, biochemical, pharmacy, stem cell, agriculture |
is listed by: ScienceExchange is parent organization of: Lonza Viral Based Therapeutics |
grid.473847.b, ISNI: 0000 0004 4691 9813, SciEx_4981 | https://ror.org/00yqk5t74 | http://www.scienceexchange.com/facilities/lonza | SCR_000377 | SciCrunch Registry | 2026-09-26 02:12:46 | 966 | |||||||
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TDARACNE Resource Report Resource Website |
TDARACNE (RRID:SCR_000498) | TDARACNE | software resource | Software package to infer gene regulatory networks from time-series measurements. The algorithm is expected to be useful in reconstruction of small biological directed networks from time course data. | microarray, time course |
is listed by: OMICtools has parent organization: Bioconductor |
THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_02013 | SCR_000498 | SciCrunch Registry | TDARACNE - Network reverse engineering from time course data | 2026-09-26 02:12:48 | 0 | |||||||
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University of Southern Queensland; Queensland; Australia Resource Report Resource Website |
University of Southern Queensland; Queensland; Australia (RRID:SCR_000374) | university | A public university in Australia that offers degree programs in business, law and education as well as health, engineering and the sciences at the undergraduate level. The university also does research at three research institutes and seven research centers which focus on a wide range of business, agricultural, scientific, environmental, and technological issues. | public, business, law, education, health, engineering, sciences, research, agriculture, technology, environment |
is parent organization of: Australian Digital Futures Institute is parent organization of: Fascinator is parent organization of: Integrated Content Environment |
ISNI:0000 0004 0473 0844, Wikidata:Q978124, nlx_46605, grid.1048.d, Crossref funder ID:501100001795 | https://ror.org/04sjbnx57 | SCR_000374 | SciCrunch Registry | USQ | 2026-09-26 02:12:46 | 0 |
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