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https://www.microscope.healthcare.nikon.com/products/upright-microscopes/eclipse-e200

Educational microscope. Designed as simple system that reduces fatigue from use over long periods. With structure and anti mold design, offers high quality and accuracy that can be retained for years even in hot and humid environments.

Proper citation: Nikon: Eclipse E200 microscope (RRID:SCR_021243) Copy   

•   Source: SciCrunch Registry

https://www.microscope.healthcare.nikon.com/en_EU/products/inverted-microscopes/eclipse-ti-series

ECLIPSE Ti Series of inverted microscopes combined with Nikon NIS-Elements imaging acquisition and analysis software, enables to generate data faster, more easily, and more accurately than ever before.Product Discontinued. Replaced by ECLIPSE Ti2 Series.

Proper citation: Nikon: ECLIPSE Ti inverted microscope system (RRID:SCR_021242) Copy   

•   Source: SciCrunch Registry

https://www.zeiss.com/microscopy/int/products/imaging-systems/lattice-lightsheet-7.html?utm_campaign=lattice-lightsheet-21&utm_source=stream&utm_medium=video&utm_term=pl-organic

System for long term volumetric imaging of living cells. Makes light sheet fluorescence microscopy available for live cell imaging at subcellular resolution. Automated system for volumetric imaging of subcellular structures and dynamics over hours and days with protection from photo damage.

Proper citation: Zeiss: Lattice Lightsheet 7 (RRID:SCR_021237) Copy   

•   Source: SciCrunch Registry

https://diagnostics.roche.com/us/en/products/instruments/discovery-ultra-research.html

Immunohistochemistry processor that can be used for immunohistochemistry and in situ hybridization slide preparation and processing. With 30 individual slide drawers, DISCOVERY ULTRA system enables to run both manual and fully automated experiments simultaneously with nosynchronization errors. Provides ability to fully automate broad range of IHC and ISH assays, including FISH, gene and protein IHC/ISH, mRNA ISH and multiplex assays with any combination of IHC and ISH.

Proper citation: Roche: Ventana DISCOVERY Ultra (RRID:SCR_021254) Copy   

•   Source: SciCrunch Registry

https://github.com/murthylab/sleap

Method for pose estimation that uses deep neural networks.Open source software tool as deep learning based framework for estimating positions of animal body parts.Supports multi animal pose estimation and tracking, and includes advanced labeling or training.SLEAP is next generation of LEAP and allows for tracking multiple animals.

Proper citation: Social LEAP (RRID:SCR_021382) Copy   

•   Source: SciCrunch Registry

https://www.iqvia.com/

IQVIA, formerly Quintiles and IMS Health, Inc., is an American multinational company serving the combined industries of health information technology and clinical research.

Proper citation: IQVIA (RRID:SCR_021377) Copy   

•   Source: SciCrunch Registry

https://github.com/slundberg/shap

Software tool as unified framework for interpreting predictions of machine learning models. Used to explain output of any machine learning model. Connects optimal credit allocation with local explanations using classic Shapley values from game theory and their related extensions.

Proper citation: SHapley Additive ExPlanations (RRID:SCR_021362) Copy   

•   Source: SciCrunch Registry

https://protaratx.com/

Clinical stage company identifying and advancing transformative therapies for people with rare and specialty diseases. Former name was ArTara Therapeutics.

Proper citation: Protara Therapeutics (RRID:SCR_021376) Copy   

•   Source: SciCrunch Registry

https://github.com/sanworks/PulsePal

Software tool as part of Pulse Pal system which allows users to create and trigger software defined trains of voltage pulses with high temporal precision.

Proper citation: Pulse Pal (RRID:SCR_021611) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/spikegadgets/

Company to design and sell powerful neuroscience hardware that interfaces with open source software platform supported by large community of scientists and developers. Support efforts of open source community in commercially sustainable way.

Proper citation: SpikeGadgets (RRID:SCR_021623) Copy   

•   Source: SciCrunch Registry

https://www.kentscientific.com/products/somnoflo/

Compact, standalone vaporizer that uses either ambient air with internal air pump or compressed gas. It delivers only anesthetic required by animal according to its weight with flows down to 0.05 LPM. Low flow isoflurane anesthesia machine.

Proper citation: Kent Scientific: SomnoFlow Low Flow Electronic Vaporizer (RRID:SCR_021629) Copy   

•   Source: SciCrunch Registry

https://github.com/strawlab/freemovr_engine

Software tool as virtual reality engine built on ROS and OpenSceneGraph.Perspective correct Virtual Reality for freely moving animals engine. Used for multicomputer realtime tracking and display with goal of being useful for scientific studies of vision and behavior.Part of FreemoVR system.

Proper citation: FreemoVR (RRID:SCR_021601) Copy   

•   Source: SciCrunch Registry

https://github.com/FlySorterLLC

Software tool to automate various fly handling tasks.Control software for Drosophila handling robot MAPLE.

Proper citation: Modular Automated Platform for Large Scale Experiments (RRID:SCR_021600) Copy   

•   Source: SciCrunch Registry

https://github.com/amchagas/poke_device_arduino

Software tool as script to test if IR led, IR photodiode, arduino and 3D printed nose poke device work properly. Part of Nose Poke Device system.

Proper citation: poke device arduino (RRID:SCR_021608) Copy   

•   Source: SciCrunch Registry

https://github.com/delcasso/hope

Softwre tool as part of Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology project for brain implant.

Proper citation: Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology (RRID:SCR_021606) Copy   

•   Source: SciCrunch Registry

https://www.nanostring.com/products/geomx-digital-spatial-profiler/geomx-dsp-overview/

Integrated commercial system comprising hardware, software and nCounter chemistry that enables simultaneous, highly multiplex spatial profiling of proteins or RNA in FFPE tissues. DSP platform quantifies abundance of protein or RNA by counting unique indexing oligonucleotides assigned to each target of interest. Used to rapidly and quantitatively assess biological implications of heterogeneity within tissue samples.

Proper citation: NanoString: GeoMx Digital Spatial Profiler (RRID:SCR_021660) Copy   

•   Source: SciCrunch Registry

https://meyerinst.com/library/NanoZoomer_RS_Brochure_Catalog.pdf

High speed, high resolution digital scanner with network features. User friendly full slide scanner designed to process up to 210 slides automatically.

Proper citation: Hamamatsu: NanoZoomer 2.0-HT (RRID:SCR_021658) Copy   

•   Source: SciCrunch Registry

https://pypi.org/project/ontquery/

Software tool as framework querying ontology terms within SciCrunch and SciCrunch SciGraph endpoints.

Proper citation: ontquery (RRID:SCR_021659) Copy   

•   Source: SciCrunch Registry

https://www.nexcelom.com/nexcelom-products/automated-cell-counters/cellometer-auto-t4-automated-cell-counter/

System includes automated cell counter for trypan blue viability for cell lines and bright field imaging and pattern recognition software to quickly and accurately identify and count individual cells. Cell count, concentration, diameter, and % viability are automatically calculated and reported.

Proper citation: McKinley: Cellometer Auto T4 (RRID:SCR_021656) Copy   

•   Source: SciCrunch Registry

https://pdf.medicalexpo.com/pdf/ge-healthcare-life-sciences/amersham-imager-600/80554-135352.html

Amersham Imager 600 is CCD camera system that produces digitial images of samples in gels or membranes in three different modes: chemiluminescence, colorimetric and fluorescent image capture. Provides imaging system to capture and analyze protein and DNA sample gels and membranes in high resolution.

Proper citation: GE: Amersham Imager 600 (RRID:SCR_021853) Copy   

•   Source: SciCrunch Registry