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http://jsu.eagle-i.net/i/0000012a-c461-a3f4-0055-c4eb80000000

THIS RESOURCE IS NO LONGER IN SERVICE, documented on January 18, 2022. Goal of the center is to translatate high biological data into solutions for health, agriculture and the environment The objectives of the center are to conduct research in bioinformatics and computational biology with translational endpoints and train students to become leaders in bioinformatics and computational biology.

Proper citation: Jacksonville State University Center for Bioinformatics and Computational Biology (RRID:SCR_009890) Copy   

•   Source: SciCrunch Registry
  

http://bioinformatics.psb.ugent.be/

A University of Ghent center of excellence in the fields of gene prediction and genome annotation, comparative and evolutionary genomics, and systems biology. The team is involved in many international genome projects and has a particular interest in genome evolution and gene and genome duplication events.

Proper citation: Bioinformatics Gent (RRID:SCR_010251) Copy   

•   Source: SciCrunch Registry
  

http://cordis.europa.eu/home_en.html

European Commission''s primary public repository and portal to disseminate information on all EU-funded research projects and their results in the broadest sense.

Proper citation: CORDIS (RRID:SCR_010253) Copy   

•   Source: SciCrunch Registry
  

http://promedmail.org/

Program for Monitoring Emerging Diseases - is an Internet-based reporting system dedicated to rapid global dissemination of information on outbreaks of infectious diseases and acute exposures to toxins that affect human health, including those in animals and in plants grown for food or animal feed. Electronic communications enable ProMED-mail to provide up-to-date and reliable news about threats to human, animal, and food plant health around the world, seven days a week. By providing early warning of outbreaks of emerging and re-emerging diseases, public health precautions at all levels can be taken in a timely manner to prevent epidemic transmission and to save lives. ProMED-mail is open to all sources and free of political constraints. Sources of information include media reports, official reports, online summaries, local observers, and others. Reports are often contributed by ProMED-mail subscribers. A team of expert human, plant, and animal disease moderators screen, review, and investigate reports before posting to the network. Reports are distributed by email to direct subscribers and posted immediately on the ProMED-mail web site. ProMED-mail currently reaches over 60,000 subscribers in at least 185 countries. ProMED collaborates closely with HealthMap at Children''s Hospital Boston. We also gratefully acknowledge HealthMap for providing Website and hosting services to ProMED.

Proper citation: ProMed-Mail (RRID:SCR_010260) Copy   

•   Source: SciCrunch Registry
  

http://www.epa.gov/ncea/

The environmental assessment web site provides guidance and risk assessments aimed at protecting human health and the environment.

Proper citation: Environmental Assessment Reports from the EPA (RRID:SCR_010264) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/BRIDG

An instance of a Domain Analysis Model (DAM) with the goal of producing a shared view of the dynamic and static semantics for the domain of protocol-driven research and its associated regulatory artifacts. This domain of interest is further defined as: Protocol-driven research and its associated regulatory artifacts: i.e. the data, organization, resources, rules, and processes involved in the formal assessment of the utility, impact, or other pharmacological, physiological, or psychological effects of a drug, procedure, process, or device on a human, animal, or other subject or substance plus all associated regulatory artifacts required for or derived from this effort, including data specifically associated with post-marketing adverse event reporting. The Biomedical Research Integrated Domain Group (BRIDG) Model is a collaborative effort engaging stakeholders from the Clinical Data Interchange Standards Consortium (CDISC), the HL7 Regulated Clinical Research Information Management Technical Committee (RCRIM TC), the National Cancer Institute (NCI) and its Cancer Biomedical Informatics Grid (caBIG??), and the US Food and Drug Administration (FDA). Source repository: https://ncisvn.nci.nih.gov/WebSVN/listing.php?repname=bridg-model&path=%2Ftrunk%2FModel+-+OWL%2F&

Proper citation: Biomedical Research Integrated Domain Group Model (RRID:SCR_010265) Copy   

•   Source: SciCrunch Registry
  

http://link.springer.com/article/10.1007%2Fs11357-003-0002-y

A database that stores information on the biomolecules which are modulated during aging and by caloric restriction (CR). To enhance its usefulness, data collected from studies of CR''''s anti-oxidative action on gene expression, oxidative stress, and many chronic age-related diseases are included. AgingDB is organized into two sections A) apoptosis and the various mitochondrial biomolecules that play a role in aging; B) nuclear transcription factors known to be_sensitive to oxidative environment. AgingDB features an imagemap of biomolecular signal pathways and visualized information that includes protein-protein interactions of biomolecules. Authorized users can submit a new biomolecule or edit an existing biomolecule to reflect latest developments.

Proper citation: AgingDB (RRID:SCR_010226) Copy   

•   Source: SciCrunch Registry
  

http://www.diagnomx.eu/vipi/home.php

Contract Research Organization focusing on medial diagnosis.

Proper citation: DiagnomX (RRID:SCR_010232) Copy   

•   Source: SciCrunch Registry
  

http://www.illumina.com/

American company incorporated that develops, manufactures and markets integrated systems for the analysis of genetic variation and biological function. Provides a line of products and services that serve the sequencing, genotyping and gene expression and proteomics markets. Its headquarters are located in San Diego, California.

Proper citation: Illumina (RRID:SCR_010233) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/VHOG

A multi-species anatomical ontology for the vertebrate lineage, developed as part of the Bgee project. The mapping to species-specific anatomical ontologies is provided as a separated file: http://bgee.unil.ch/download/organ_association_vHOG.txt This mapping represents homology-strict relationships, in the sense of HOM:0000007 historical homology. Each mapping has been manually reviewed, and theye provide confidence codes and references when available.

Proper citation: Vertebrate Homologous Organ Group Ontology (RRID:SCR_010444) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/VANDF, NDF

Ontology that includes information on clinical drugs, drug classes, ingredients and National Drug Code (NDC) Directory codes.

Proper citation: Veterans Health Administration National Drug File (RRID:SCR_010445) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/VSO

An extension of the Ontology for General Medical Science (OGMS) that covers the four consensus human vital signs: blood pressure, body temperature, respiration rate, pulse rate. VSO provides also a controlled structured vocabulary for describing vital signs measurement data, the various processes of measuring vital signs, and the various devices and anatomical entities participating in such measurements.

Proper citation: Vital Sign Ontology (RRID:SCR_010446) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/WHO-ART

Ontology of the WHO adverse reaction terminology, 1997.

Proper citation: WHO Adverse Reaction Terminology (RRID:SCR_010447) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/SuicidO

Ontology of suicidology.

Proper citation: suicideo (RRID:SCR_010451) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/GENE-CDS

Ontology to unify several functionalities in a single resource, being: * A knowledge base for clinical pharmacogenomics/pharmacogenetics that can be used for question-answering (e.g., which SNPs are associated with this drug?) * A rule base for clinical decision support (e.g., inferring that a patient with a specific set of SNPs requires a lowered dose of warfarin and generating a CDS message that can be viewed by clinicians) * A tool for checking data consistency (e.g., highlighting which allele definitions in PharmGKB are overlapping, or which clinical decision support rules are matching the same group of patients)

Proper citation: Genomic Clinical Decision Support Ontology (RRID:SCR_010331) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/GEOSPECIES

Ontology to help integrate species concepts with species occurrences, gene sequences, images, references and geographical information. See also Taxonconcept.org

Proper citation: GeoSpecies Ontology (RRID:SCR_010332) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/pseudo

Ontology for pseudogenes including biological feature, classified type, Evidence code, and subcellular origin.

Proper citation: Pseudogene (RRID:SCR_010453) Copy   

•   Source: SciCrunch Registry
  

https://bioportal.bioontology.org/ontologies/TEDDY?p=classes&conceptid=http%3A%2F%2Fidentifiers.org%2Fteddy%2FTEDDY_0000000

Ontology for dynamical behaviors, observable dynamical phenomena, and control elements of bio-models and biological systems in Systems Biology and Synthetic Biology.

Proper citation: Terminology for the Description of Dynamics (RRID:SCR_010454) Copy   

•   Source: SciCrunch Registry
  

http://purl.bioontology.org/ontology/HLTHINDCTRS

Ontology for standardized health outcome and health determinant indicators as maintained by the CDC National Center for Health Statistics.

Proper citation: Health Indicator Ontology (RRID:SCR_010335) Copy   

•   Source: SciCrunch Registry
  

http://www.researchobject.org/

researchobject.org is a community web page that presents the ongoing activities of the open Research Object community and gathers knowledge about related developments and adoptions. The community is composed of representatives from science domains, research infrastructure development, publishing and policy making. The vision of the community is to facilitate knowledge interchange and reproducible computational research through the definition and promotion of Research Object principles, i.e. identification, annotation, and aggregation of scientific artefacts. The focus is not on replacing any solutions that are already in place, but on ''engaging'' with existing solutions.

Proper citation: Research Object (RRID:SCR_010456) Copy   

•   Source: SciCrunch Registry