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https://www.tainstruments.com/3200-system/
Mechanical testing apparatus with 225 N or 450 N maximum force and range of static to 300 Hz frequency response. Tests include torsion testing, creep under dynamic loading, special environment hot cold chambers, biomedical research, and engineered materials test applications..
Proper citation: TA Instruments: Electroforce 3200 Mechanical Testing Apparatus (RRID:SCR_018637) Copy
https://diagnostics.roche.com/global/en/products/instruments/discovery-xt-research-platform.html
Immunohistochemistry processor that can be used for immunohistochemistry and in situ hybridization slide preparation and processing.
Proper citation: Roche: Ventana Discovery XT Immunohistochemistry Processor (RRID:SCR_018643) Copy
Laser capture microdissection system that includes infrared lasers. It can be used for laser capture microdissection LCM, ultraviolet UV laser cutting, sanger sequencing, next generation sequencing, and quantitative PCR.
Proper citation: Thermo Fisher: Arcturus Cellect Laser Capture Microdissection System (RRID:SCR_018641) Copy
Automated wide range incubator used to minimize plate movement, receive samples, store plates, and track plates.Temperature range is from 10 to 50 degrees Celsius with humidity level of up to 95 rH.
Proper citation: Thermo Fisher: Cytomat 6001 Automated Wide Range Incubator (RRID:SCR_018646) Copy
https://www.ncbi.nlm.nih.gov/Structure/cdd/wrpsb.cgi
Web tool for conserved domains searching within protein or coding nucleotide sequence.
Proper citation: Conserved Domains Search (RRID:SCR_018729) Copy
https://github.com/yanzhanglab/Graph2GO
Software tool as graph based representation learning method for protein function prediction. Multi modal graph based representation learning model that can integrate heterogeneous information including multiple types of interaction networks including sequence similarity network and protein-protein interaction network, and protein features including amino acid sequence, sub cellular location and protein domains, to predict protein functions on Gene Ontology.
Proper citation: Graph2GO (RRID:SCR_018726) Copy
https://www.leica-microsystems.com/products/confocal-microscopes/p/dive/
Multiphoton confocal microscope with spectrally tunable detection. Equipped with 4Tune, tunable, non descanned detection unit.
Proper citation: Leica: SP8 DIVE multi photon microscope (RRID:SCR_018852) Copy
http://www.pirx.com/iMol/index.shtml
Software molecular visualization application for Mac OS X operating system. Tool for chemists and molecular biologists used for handling small and large molecules, loading multiple molecules, moving and rotating them independently, or displaying molecular dynamics trajectory. Allows loading molecules using file formats: PDB, XYZ, MOL2, HIN, CAR, ALC, BIO.
Proper citation: iMol (RRID:SCR_018735) Copy
https://www.biosimulations.org/
Web tool for sharing and re-using biomodels, simulations, and visualizations of simulations results. Supports variety of modeling frameworks including kinetic, constraint based, and logical modeling, model formats including BNGL, CellML, SBML, and simulation tools including COPASI, libRoadRunner/tellurium, NFSim, VCell.
Proper citation: BioSimulations (RRID:SCR_018733) Copy
https://cistrome.shinyapps.io/timer/
Web server for comprehensive analysis of tumor infiltrating immune cells. Web tool for systematical analysis of immune infiltrates across diverse cancer types. Allows users to input function specific parameters, with resulting figures dynamically displayed to access tumor immunological, clinical, and genomic features.
Proper citation: TIMER (RRID:SCR_018737) Copy
https://imspectordocs.readthedocs.io/en/latest/intro.html
Software tool for real time analysis and data visualization. Software system for experimental control and quantitative data analysis in microscopy and spectroscopy.Integration of data processing and acquisition allows real time analysis and visualization of experimental results.
Proper citation: Imspector (RRID:SCR_018863) Copy
Open source 3D printing software which supports multi part printing and has slicers.
Proper citation: Repetier Host (RRID:SCR_018901) Copy
https://www.sutter.com/MICROSCOPES/mom.html
Two photon microscope capable of imaging deep within living specimens when combined with Ti:Sapphire Laser. Provides 3D objective movement and rotation allowing specimen to remain stationary.
Proper citation: Sutter: Movable Objective Microscope (RRID:SCR_018860) Copy
https://github.com/viromelab/tracespipe
Software tool as hybrid pipeline for reconstruction and analysis of viral and host genomes at multi-organ level. Pipeline for identification, assembly, and analysis of viral genomes, that combine DNA sequence data from multiple organs. Cooperation between compression based prediction, sequence alignment, and de-novo assembly. Provides transmission and storage of data.
Proper citation: TRACESPipe (RRID:SCR_018831) Copy
https://github.com/TMinchington/sass
Software tool as custom analysis code combining single-cell traces and spot detection from live imaging movies and using Imaris output.
Proper citation: Simple Assignment of Spots to Surfaces (RRID:SCR_018797) Copy
http://www.harvardapparatus.com/media/harvard/pdf/Inspira_557058_9.pdf
Volume Controlled Ventilator delivers desired tidal volume to animal by precisely controlling stroke of piston. Since actual stroke length may be modified for given stroke, sigh breaths are supported.
Proper citation: Harvard Apparatus: Inspira Advanced Safety Ventilator, Volume Controlled (RRID:SCR_018834) Copy
http://m-cdn.adinstruments.com/owners-guides/PowerLab%20SP%20Series%20OG.pdf
Integrated system of hardware and software designed to record, display, and analyse experimental data. Consists of PowerLab recording unit and possible ancillary devices, software that run on computer to which PowerLab is connected. PowerLab/4SP has four inputs for recording external signals.
Proper citation: ADInstruments: PowerLab/4SP acquisition system (RRID:SCR_018833) Copy
https://millar.com/Clinical/Control-Units-and-Accessories/
Pressure Control Unit is two channel, patient isolated, line powered bridge amplifier for connecting one or two single sensor Millar Mikro-Tip catheters to clinical patient monitor or standalone data acquisition system. Provides built in ridge excitation eliminating need for separate bridge amplifier. Analog output signal level of 1V/100 mmHg is compatible with most pressure monitors and data acquisition systems. In line power supply adapts automatically to line voltages from 100 to 240 volts AC.
Proper citation: Millar: PCU-2000 Pressure Control Unit with Patient Isolation (RRID:SCR_018840) Copy
https://science-products.com/en/shop/491/23/data-aquisition/interfaces/micro1401-3
Unit records waveform data, digital event and marker information and can simultaneously generate waveform and digital outputs in real time for multi tasking experimental control.
Proper citation: CED: Micro1401-4 data acquisition unit (RRID:SCR_018846) Copy
Web tool as protein structure prediction service. Provides automated structure prediction and analysis tools that can be used to infer protein structural information from genomic data. Produces model for entire protein sequence in presence or absence of sequence homology to protein of known structure.
Proper citation: Robetta (RRID:SCR_018805) Copy
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