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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
PTNet
 
Resource Report
Resource Website
PTNet (RRID:SCR_022975) software resource, source code Graph based learning model for protein expression estimation by considering miRNA-mRNA interactions. Estimates protein levels by considering miRNA-mRNA interaction network, mRNA expression and miRNA expression. protein level, protein expression estimation, miRNA-mRNA interactions, mRNA expression, miRNA expression, NIDDK DK097771;
NIGMS R01GM113952;
NSF III1755761
DOI:10.1093/bib/bbab264 Free, Available for download, Freely available SCR_022975 2026-09-05 06:34:31 0
Rare and Atypical Diabetes Network
 
Resource Report
Resource Website
1+ mentions
Rare and Atypical Diabetes Network (RRID:SCR_024732) RADIANT data or information resource, database, disease-related portal, portal, topical portal Portal dedicated to characterizing, discovering and defining rare and atypical forms of diabetes. Network of universities, hospitals and clinics across the United States dedicated to better understanding atypical diabetes. Team of academic institutions and scientists collaborates with physicians and healthcare groups to identify those with atypical diabetes and learn more about their health. USA, universities network, hospitals and clinics network, characterizing atypical diabetes, discovering atypical diabetes, defining atypical diabetes, rare and atypical forms of diabetes, atypical diabetes, is listed by: NIDDK Information Network (dkNET)
is listed by: NIDDK Central Repository
rare and atypical forms of diabetes, Diabetes NIDDK Restricted SCR_024732 Rare and Atypical DIAbetes NeTwork 2026-09-05 06:34:40 3
STARNET
 
Resource Report
Resource Website
1+ mentions
STARNET (RRID:SCR_025238) STARNET data access protocol, software resource, source code, web service Web interactive browser to visualize data and perform gene set enrichment analysis along with gene and SNP lookup. Web interface used to query STARNET datasets and downstream analysis which includes RNAseq from 7 tissues: blood, free internal mammary artery (MAM), atherosclerotic aortic root (AOR), subcutaneous fat (SF), visceral abdominal fat (VAF), skeletal muscle (SKLM), and liver (LIV). Paired SNP genotyping data is included and utilized for tissue expression quantitative trait loci (eQTL), CAD heritability (H2), co-expression networks and gene regulatory networks. cross-tissue co-expression analysis, STARNET multitissue gene expression data, cardiovascular disease patients, American Heart Association ;
AstraZeneca ;
European Union ;
Federal German Ministries ;
Heart Lung Foundation ;
ModulMax ;
New South Wales health ;
NHLBI HL138193;
NHLBI PO1 HL28481;
NHLBI R01 HL144651;
NHLBI R01 HL147883;
NHLBI R01HL125863;
NHLBI R01HL130423;
NHLBI R01HL135093;
NHLBI R01HL148167;
NIDDK R01 DK117850;
Swedish Research Council
PMID:36276926 Free, Freely available https://github.com/skoplev/starnet SCR_025238 Stockholm-Tartu Atherosclerosis Reverse Networks Engineering Task 2026-09-05 06:34:53 6
Penn machine learning benchmark repository
 
Resource Report
Resource Website
Penn machine learning benchmark repository (RRID:SCR_017138) PMLB data or information resource, data set Python wrapper for Penn Machine Learning Benchmark data repository. Large, curated repository of benchmark datasets for evaluating supervised machine learning algorithms. Part of PyPI https://pypi.org/ benchmark, suite, machine, learning, evaluation, comparison, repository, curated, dataset NCATS TR001263;
NEI EY022300;
NHLBI HL134015;
NIAID AI116794;
NIDDK DK112217;
NIEHS ES013508;
NLM LM009012;
NLM LM010098;
NLM LM011360;
Warren Center for Network and Data Science
PMID:29238404 Free, Restricted https://github.com/EpistasisLab/penn-ml-benchmarks SCR_017138 Penn Machine Learning Benchmark 2026-09-05 06:34:10 0
Stanford Diabetes Research Center Diabetes Clinical and Translational Core
 
Resource Report
Resource Website
1+ mentions
Stanford Diabetes Research Center Diabetes Clinical and Translational Core (RRID:SCR_016212) DCTC, SDRC-DCTC access service resource, core facility, service resource With the following services from the Diabetes Clinical and Translational Core (DCTC), members will receive training in biospecimen preservation, study design, data analysis, data management, use of statistical software and clinical trial conduct. diabetes, clinical, translation, specimen, study, design, data, statistic is related to: Stanford Diabetes Research Center Diabetes Genomics Analysis Core
is organization facet of: Stanford Diabetes Research Center
NIDDK P30 DK116074 SCR_016212 Diabetes Clinical and Translational Core, Clinical and Translational Core, SDRC Diabetes Clinical and Translational Core 2026-09-05 06:34:09 1
Stanford Diabetes Research Center Diabetes Immune Monitoring Core
 
Resource Report
Resource Website
Stanford Diabetes Research Center Diabetes Immune Monitoring Core (RRID:SCR_016210) DIMC, SDRC-DIMC access service resource, core facility, service resource Core facility that provides immune monitoring assays at the RNA, protein, and cellular level, as well as archiving, reporting, and data mining support for clinical and translational studies related to Diabetes. The DIMC is a specialized subcore of the Human Immune Monitoring Center (HIMC) at Stanford. diabetes, assay, immune, system, clinical, translational, human, data is related to: Stanford Diabetes Research Center Diabetes Genomics Analysis Core
is organization facet of: Stanford Diabetes Research Center
NIDDK P30 DK116074 SCR_016210 Diabetes Immune Monitoring Core, SDRC Diabetes Immune Monitoring Core 2026-09-05 06:34:09 0
Stanford Diabetes Research Center Stanford Islet Research Core
 
Resource Report
Resource Website
Stanford Diabetes Research Center Stanford Islet Research Core (RRID:SCR_016211) SIRC, SDRC-SIRC access service resource, core facility, service resource Core facility whose services include: Islet Isolation, Islet transplantation, Islet Culture, Islet Perifusion & Islet Hormone Assays. The SIRC is supported by the Stanford Diabetes Research Center (SDRC). islet, isolation, transplant, culture, perifusion, assay, hormone is related to: Stanford Diabetes Research Center Diabetes Genomics Analysis Core
is organization facet of: Stanford Diabetes Research Center
NIDDK P30 DK116074 SCR_016211 SDRC Stanford Islet Research Core, Stanford Islet Research Core 2026-09-05 06:34:09 0
University of California San Francisco Parnassus Flow Cytometry Core Facility
 
Resource Report
Resource Website
100+ mentions
University of California San Francisco Parnassus Flow Cytometry Core Facility (RRID:SCR_018206) PFCC access service resource, core facility, service resource Core assists investigators whose research requires molecular marker characterization of cells in suspension as well as isolation of cells based on those markers. Advanced cell sorting and cytometric analyses by Flow or Mass Cytometry are provided. Molecular marker, cell characterization, cell in suspension, cell isolation, cell sorting, flow cytometry, mass cytometry, cytometric analysis, core facility, ABRF is listed by: ABRF CoreMarketplace
is related to: USEDit
NIDDK P30DK063720 Restricted ABRF_1007, SCR_015105 https://coremarketplace.org?FacilityID=1007 SCR_018206 University of California San Francisco Diabetes Research Center Cytometry and Cell Sorting Core, , University of California San Francisco Diabetes Research Center Parnassus Flow Cytometry CoLab, UCSF Parnassus Flow CoLab 2026-09-05 06:34:16 174
Einstein-Mount Sinai Diabetes Research Center Translational Research Core Facility
 
Resource Report
Resource Website
Einstein-Mount Sinai Diabetes Research Center Translational Research Core Facility (RRID:SCR_015068) access service resource, core facility, service resource Core services include consultation, technical support and training and mentoring in clinical and translational research methods that are specifically applicable to diabetes, its complications and related metabolic disorders. Personel provides expertise in first-in-human and mechanistic studies in integrative physiology, in clinical trials of diabetes and obesity, and in application of new technologies. translational research, data interpretation, diabetes research is listed by: NIDDK Information Network (dkNET)
is listed by: ABRF CoreMarketplace
has parent organization: Einstein-Mount Sinai Diabetes Research Center
is organization facet of: Einstein-Mount Sinai Diabetes Research Center
Diabetes New York Obesity Research Center ;
Center for the Study of Diabetic Complications ;
Montefiore Clinical Diabetes Center ;
NIDDK P30DK020541
Open ABRF_2861 https://coremarketplace.org/?FacilityID=2861&citation=1 http://www.einstein.yu.edu/centers/diabetes-research/research-areas/biomedical-cores/translational-research-core/ SCR_015068 Einstein-Mount Sinai Diabetes Research Center Translational Research Core 2026-09-05 06:34:01 0
University of California San Francisco Diabetes Research Center Mouse Metabolism Core
 
Resource Report
Resource Website
University of California San Francisco Diabetes Research Center Mouse Metabolism Core (RRID:SCR_015101) access service resource, core facility, resource, service resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on October 10,2024. Core which provides technical support for UCSF investigators to conduct metabolic studies using a 12-chambered Comprehensive Lab Animal Monitoring System (CLAMS), an EchoMRI, and Dual energy X-ray absorptiometry, which together allow measurement of food intake, water intake, motor activities, core temperature, and body composition in live mice. It also helps to identify emerging technologies that will enhance multiple research programs and coordinates the acquisition and maintenance of those facilities. mouse metabolism, obesity, metabolic diseases is listed by: NIDDK Information Network (dkNET)
has parent organization: University of California at San Francisco; California; USA
has parent organization: University of California San Francisco Diabetes Research Center
is organization facet of: University of California San Francisco Diabetes Research Center
Diabetes NIDDK P30DK063720 THIS RESOURCE IS NO LONGER IN SERVICE http://drc.ucsf.edu/mouse-metabolism-core SCR_015101 2026-09-05 06:34:01 0
Boston Area Diabetes Endocrinology Research Center Cell Biology and Morphology Core Facility
 
Resource Report
Resource Website
Boston Area Diabetes Endocrinology Research Center Cell Biology and Morphology Core Facility (RRID:SCR_015069) access service resource, core facility, service resource Services provided include tissue preparation, embedding and sectioning for electron microscopy, use of electron microscope and photography of thin sections, immunogold staining for electron microscopy, preparation and incubation of samples (cells and tissues) for immunofluorescence microscopy, confocal microscopy and digital imaging. microscopy, immunofluorescence, immunogold, morphology, confocal microscopy, electron microscopy, digital imaging, is listed by: NIDDK Information Network (dkNET)
is listed by: ABRF CoreMarketplace
is organization facet of: Boston Area Diabetes Endocrinology Research Center
Diabetes NIDDK P30DK057521 Restricted ABRF_2860 https://coremarketplace.org/?FacilityID=2860&citation=1 http://www.baderc.org/cores/CBMCore.html SCR_015069 Boston Area Diabetes Endocrinology Research Center Cell Biology and Morphology 2026-09-05 06:34:01 0
University of California San Francisco Diabetes Research Center Islet Production Core Facility
 
Resource Report
Resource Website
University of California San Francisco Diabetes Research Center Islet Production Core Facility (RRID:SCR_015106) access service resource, core facility, service resource Core that enables clinical and basic research that analyzes the function of isolated pancreatic islets. It coordinates and delivers purified human islets to investigators when research need matches the availability of a human pancreas. islet isolation, pancreatic islets has parent organization: University of California at San Francisco; California; USA
has parent organization: University of California San Francisco Diabetes Research Center
is organization facet of: University of California San Francisco Diabetes Research Center
Diabetes NIDDK P30DK063720 Restricted http://drc.ucsf.edu/islet-production-core SCR_015106 2026-09-05 06:34:01 0
University of California San Francisco Diabetes Research Center Microscopy Core Facility
 
Resource Report
Resource Website
University of California San Francisco Diabetes Research Center Microscopy Core Facility (RRID:SCR_015103) access service resource, core facility, service resource Core that consolidates, enhances and disseminates Diabetes Center resources and expertise in tissue and cell imaging technologies. Confocal fluorescence, widefield fluorescence, high throughput fluorescence and brightfield microscopes are available directly within the DRC Microscopy Core. Image quantification and analysis is performed at dedicated workstations. tissue imaging, cell imaging, fluorescence, brightfield microscopes, microscopy is listed by: NIDDK Information Network (dkNET)
has parent organization: University of California at San Francisco; California; USA
has parent organization: University of California San Francisco Diabetes Research Center
is organization facet of: University of California San Francisco Diabetes Research Center
Diabetes NIDDK P30DK063720 Restricted http://drc.ucsf.edu/microscopy-core SCR_015103 , DRC Microscopy Core 2026-09-05 06:34:01 0
University of California San Francisco Diabetes Research Center Lentiviral RNAi Core Facility
 
Resource Report
Resource Website
University of California San Francisco Diabetes Research Center Lentiviral RNAi Core Facility (RRID:SCR_015104) access service resource, core facility, service resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on November 5,2024. Core that provides reagents, equipment, training, supervision, and monitoring of investigators wishing to ensure the proper compliance with biosafety containment required for lentiviral-based research, lentiviral preparation services for investigators, and education on RNAi experimentation, through the lentiviral core website, and through protocols available at the facility. lentivirus, RNA interference, short hairpin RNAs, shRNA is listed by: NIDDK Information Network (dkNET)
has parent organization: University of California at San Francisco; California; USA
has parent organization: University of California San Francisco Diabetes Research Center
is organization facet of: University of California San Francisco Diabetes Research Center
Diabetes NIDDK P30DK063720 THIS RESOURCE IS NO LONGER IN SERVICE SCR_015104 2026-09-05 06:34:01 0
Boston Area Diabetes Endocrinology Research Center Molecular Biology
 
Resource Report
Resource Website
Boston Area Diabetes Endocrinology Research Center Molecular Biology (RRID:SCR_015079) access service resource, core facility, service resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 24,2024. Core that provides services for DNA sequencing and oligonucleotide synthesis, as well as support for projects that require research laboratory automation, such as siRNA screens and transcript abundance profiling. It also offers experimental design and advice for automation and high throughput screening of siRNA collections based on the Ambion siRNA collection. DNA sequencing, siRNA collection, research laboratory automation is listed by: NIDDK Information Network (dkNET)
has parent organization: Boston Area Diabetes Endocrinology Research Center
is organization facet of: Boston Area Diabetes Endocrinology Research Center
Diabetes NIDDK P30DK057521 THIS RESOURCE IS NO LONGER IN SERVICE SCR_015079 2026-09-05 06:34:01 0
University of Alabama at Birmingham Diabetes Research Center Animal Physiology Core Facility
 
Resource Report
Resource Website
University of Alabama at Birmingham Diabetes Research Center Animal Physiology Core Facility (RRID:SCR_015110) access service resource, core facility, service resource Core that provides diabetes researches with diabetes related phenotyping in small animal models. Their services offered include the assessment of body composition, energy balance, glucose homeostasis, cardiovascular assessment, imaging, and transgenic animals models. ABRF, animal physiology, phenotyping, transgenetics, diabetes, phenotyping, small animal models, assessment of body composition, energy balance, glucose homeostasis, transgenic animals models, is listed by: NIDDK Information Network (dkNET)
is listed by: ABRF CoreMarketplace
has parent organization: University of Alabama at Birmingham; Alabama; USA
has parent organization: University of Alabama at Birmingham Diabetes Research Center
is organization facet of: University of Alabama at Birmingham Diabetes Research Center
Diabetes NIDDK DK079626 Open ABRF_2971 https://coremarketplace.org/?FacilityID=2971&citation=1 SCR_015110 Animal Physiology Core 2026-09-05 06:34:01 0
Columbia Diabetes Research Center Flow Cytometry and Cell Sorting Core Facility
 
Resource Report
Resource Website
Columbia Diabetes Research Center Flow Cytometry and Cell Sorting Core Facility (RRID:SCR_015078) access service resource, core facility, service resource Core which assists investigators to quantify and phenotypically characterize cell populations that contribute to the metabolic, immunologic and developmental programs of diabetes and its complications; and to purify populations of cells of relevance to diabetes and its complications. cytometry, flow cytometry, cell sorting, diabetes is listed by: NIDDK Information Network (dkNET)
is listed by: ABRF CoreMarketplace
has parent organization: Columbia University; New York; USA
is organization facet of: Columbia Diabetes Research Center
Diabetes NIDDK P30DK063608 ABRF_2857 https://coremarketplace.org/?FacilityID=2857&citation=1 https://www.derc.cumc.columbia.edu/core-facilities-and-services/flow-cyometry-and-cell-sorting-core SCR_015078 Columbia Diabetes Research Center Flow Cytometry and Cell Sorting Core 2026-09-05 06:34:01 0
Michigan Diabetes Research Center Administrative Core Facility
 
Resource Report
Resource Website
Michigan Diabetes Research Center Administrative Core Facility (RRID:SCR_015115) MDRC access service resource, core facility, service resource Administration Core of the Michigan Diabetes Research Center (MDRC) provides leadership, infrastructure, and resources to support and enhance diabetes research, including the translation of scientific discoveries from bench to bedside. Establishes, promotes, and enhances multidisciplinary and collaborative basic biomedical and clinical research among member investigators studying diabetes, its complications, and related endocrine and metabolic disorders. basic and clinical research related to diabetes, provides core services, fosters interdisciplinary collaborations, has parent organization: University of Michigan; Ann Arbor; USA
is organization facet of: Michigan Diabetes Research Center
Diabetes NIDDK P30DK020572 http://diabetesresearch.med.umich.edu/Core_MDRC_Admin.php SCR_015115 , Michigan Diabetes Research Center Administrative Core, MDRC Administrative Core 2026-09-05 06:34:01 0
Boston Area Diabetes Endocrinology Research Center Pancreatic Islet
 
Resource Report
Resource Website
Boston Area Diabetes Endocrinology Research Center Pancreatic Islet (RRID:SCR_015073) access service resource, core facility, service resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 23,2024.Core which provides islets to the local diabetes research community in the Boston area. They collaborate with researchers nationally to provide nonhuman primate (NHP) islets for research. islet, islet isolation, pancreatic islet is listed by: NIDDK Information Network (dkNET)
is organization facet of: Boston Area Diabetes Endocrinology Research Center
Diabetes NIDDK P30DK057521 THIS RESOURCE IS NO LONGER IN SERVICE SCR_015073 2026-09-05 06:34:01 0
Washington University School of Medicine Diabetes Research Center Immunology of Type 1 Diabetes Core
 
Resource Report
Resource Website
Washington University School of Medicine Diabetes Research Center Immunology of Type 1 Diabetes Core (RRID:SCR_015143) access service resource, core facility, service resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on November 7,2024. Core facility that provides logistic support to investigators examining autoimmune or type 1 diabetes mellitus (T1DM) or other endocrine autoimmunities. Its main purpose is to foster fundamental studies on T1DM through support for acquisition and use of diabetogenic strains of mice, islet isolation, and distribution of cells and antibodies relevant for immunological studies of T1DM. diabetes, logistic, autoimmune, type 1 diabetes mellitus, endocrine, diabetogenic mice, islet isolation, immunological study is listed by: NIDDK Information Network (dkNET)
has parent organization: Washington University School of Medicine in St. Louis; Missouri; USA
has parent organization: Washington University School of Medicine Diabetes Research Center
is organization facet of: Washington University School of Medicine Diabetes Research Center
Type 1 diabetes, Diabetes NIDDK P30DK020579 THIS RESOURCE IS NO LONGER IN SERVICE SCR_015143 2026-09-05 06:34:02 0

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