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Species: Synthetic
Genetic Insert: mScarlet-I
Vector Backbone Description: Vector Backbone:R6K-KanR; Vector Types:Bacterial Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:41529903
Comments: Please note that this plasmid may require a unique bacterial strain, so make sure to confirm that you can also obtain the appropriate growth strain. Please contact us at [email protected] or contact our distributors if you have any questions.
Please visit https://doi.org/10.1101/2025.10.06.680659 for bioRxiv preprint.
Proper citation: RRID:Addgene_248166 Copy
Species: Synthetic
Genetic Insert: Gachapin-C2
Vector Backbone Description: Backbone Size:4692; Vector Backbone:pCX; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:41579865
Proper citation: RRID:Addgene_251137 Copy
Species: Synthetic
Genetic Insert: Gachapin-4A
Vector Backbone Description: Backbone Size:4692; Vector Backbone:pCX; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:41579865
Proper citation: RRID:Addgene_251133 Copy
Genetic Insert: RsmD
Vector Backbone Description: Backbone Size:5735; Vector Backbone:pESUMO; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:41861015
Proper citation: RRID:Addgene_250651 Copy
Species: E. Coli
Genetic Insert: RsmB
Vector Backbone Description: Backbone Size:5735; Vector Backbone:pESUMO; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:41861015
Proper citation: RRID:Addgene_250650 Copy
Species: E. coli
Genetic Insert: LambdaRED
Vector Backbone Description: Vector Backbone:pSC101-TS-AmpR; Vector Types:Bacterial Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:41529903
Comments: Please visit https://doi.org/10.1101/2025.10.06.680659 for bioRxiv preprint.
Proper citation: RRID:Addgene_248172 Copy
Species: N/A
Vector Backbone Description: Vector Backbone:N/A; Vector Types:This is a strain, not a plasmid; Bacterial Resistance:None
Defining Citation: PMID:41529903
Comments: K-12 _(ara-leu) 7697 araD139 fhuA _lacX74 galK16 galE15 e14- _80dlacZ_M15 recA1 relA1 endA1 nupG rpsL (StrR) rph spoT1 _(mrr-hsdRMS-mcrBC) _lacI::(J23101-BujardRBS-LambdaCI-ECK120029600, PTet-B0033-PirWT-L3S3P21*)
Please visit https://doi.org/10.1101/2025.10.06.680659 for bioRxiv preprint.
Proper citation: RRID:Addgene_248173 Copy
Species: Synthetic
Genetic Insert: Truncated Tree Shrew Cerebellin 2 Promoter + mScarlet3 + Cre
Vector Backbone Description: Backbone Marker:VectorBuilder; Backbone Size:3733; Vector Backbone:Mammalian Gene Expression AAV Vector; Vector Types:Mammalian Expression, AAV; Bacterial Resistance:Ampicillin
Defining Citation: PMID:41794023
Comments: Please visit https://dx.doi.org/10.2139/ssrn.5390881 for preprint.
Proper citation: RRID:Addgene_248522 Copy
Species: N/A
Vector Backbone Description: Vector Backbone:N/A; Vector Types:This is a strain, not a plasmid; Bacterial Resistance:None
Defining Citation: PMID:41529903
Comments: K-12 _(ara-leu) 7697 araD139 fhuA _lacX74 galK16 galE15 e14- _80dlacZ_M15 recA1 relA1 endA1 nupG rpsL (StrR) rph spoT1 _(mrr-hsdRMS-mcrBC) _lacI::(J23101-BujardRBS-LambdaCI-ECK120029600, PTet-RiboJ-B0064-Pir116-L3S3P21*)
Please visit https://doi.org/10.1101/2025.10.06.680659 for bioRxiv preprint.
Proper citation: RRID:Addgene_248175 Copy
Species: Synthetic
Genetic Insert: palm-mScarlet3-10xSunTag
Vector Backbone Description: Backbone Size:8190; Vector Backbone:pHAGE2; Vector Types:Mammalian Expression, Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:41764601
Comments: There is a minor discrepancy between the Addgene NGS sequence and the depositor sequence: LoxP site present in reference sequence, but absent in Addgene NGS sequence. Depositor confirms this is not of concern for plasmid function.
Proper citation: RRID:Addgene_240626 Copy
Species: Homo sapiens
Genetic Insert: FUT5
Vector Backbone Description: Backbone Marker:Takara Bio cat # 632183; Backbone Size:8140; Vector Backbone:pLVX-IRES-puro; Vector Types:Mammalian Expression, Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:41744063
Proper citation: RRID:Addgene_250318 Copy
Species: Homo sapiens
Genetic Insert: FUT3
Vector Backbone Description: Backbone Marker:Takara Bio cat# 632183; Backbone Size:8140; Vector Backbone:pLVX-IRES-puro; Vector Types:Mammalian Expression, Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:41744063
Proper citation: RRID:Addgene_250317 Copy
Species: Influenza A virus
Genetic Insert: HA (A/Hawaii/70/2019, H1N1)
Vector Backbone Description: Backbone Marker:Invitrogen/Thermo Fisher Scientific; Vector Backbone:pcDNA3.1; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:41619731
Comments: Codon-optimized influenza A hemagglutinin A/Hawaii/70/2019 (H1N1), including endogenous signal peptide and lacking stop codon, fused C-terminally via a 7xGS linker to sfGFP in the pcDNA3.1 backbone. Plasmid used in the multiplex HA antibody binding assay described in Daniel et al., 2026. A detailed step-by-step protocol will be available in a forthcoming STAR Protocols publication.
Proper citation: RRID:Addgene_253733 Copy
Species: Homo sapiens
Vector Backbone Description: Backbone Marker:Thomas Gonatopoulos-Pournatzis; Vector Backbone:CRASP-Seq; Vector Types:Mammalian Expression, Lentiviral, CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:41475346
Proper citation: RRID:Addgene_232068 Copy
Species: Homo sapiens
Genetic Insert: Contains 1,066 sgRNAs targeting 224 exons for deletion with 161 genes targeting for knockout
Vector Backbone Description: Backbone Marker:Thomas Gonatopoulos-Pournatzis (Addgene plasmid # 237451); Vector Backbone:pLCHKOv4; Vector Types:Mammalian Expression, Lentiviral, CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:41633991
Proper citation: RRID:Addgene_237473 Copy
Species: Synthetic
Genetic Insert: JEDI-2Psub-Kv
Vector Backbone Description: Backbone Size:5364; Vector Backbone:pAAV-CaMKIIa; Vector Types:Mammalian Expression, AAV; Bacterial Resistance:Ampicillin
Defining Citation: PMID:41044179
Comments: This plasmid was packaged into an AAV and tested in vivo in the corresponding publication.
Proper citation: RRID:Addgene_247223 Copy
Species: Synthetic
Genetic Insert: JEDI-2Psub
Vector Backbone Description: Backbone Size:6104; Vector Backbone:pcDNA3.1/Puro-CAG; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:41044179
Comments: This plasmid was only used for in vitro characterization and was not tested in vivo in the corresponding publication.
Proper citation: RRID:Addgene_247186 Copy
Species: Synthetic
Genetic Insert: BSD
Vector Backbone Description: Backbone Marker:Le Cong; Vector Backbone:p-dCas9-SSAP-MS2-BB_BbsI (Addgene #183826); Vector Types:Mammalian Expression, CRISPR; Bacterial Resistance:Ampicillin
Defining Citation: PMID:41402634
Comments: All inserts were synthetically produced by Twist Bio.
Please visit https://doi.org/10.1101/2024.07.08.602524 for bioRxiv preprint.
Proper citation: RRID:Addgene_226108 Copy
Species: Synthetic
Genetic Insert: Citrine
Vector Backbone Description: Vector Backbone:pJT039; Vector Types:; Bacterial Resistance:Ampicillin
Defining Citation: PMID:39071298
Proper citation: RRID:Addgene_242613 Copy
Species: Homo sapiens
Genetic Insert: PCSK5
Vector Backbone Description: Backbone Marker:Iain Fraser, Addgene plasmid #25752; Vector Backbone:pEN_TTmiRC2; Vector Types:Gateway Cloning; Bacterial Resistance:Gentamicin
Defining Citation: PMID:41148168
Proper citation: RRID:Addgene_232449 Copy
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