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Plasmids are provided by Addgene and DGRC.

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Plasmid Name Proper Citation Insert Name Organism Bacterial Resistance Defining Citation Comments Vector Backbone Description Relevant Mutation Record Last Update Mentions Count
HLH Clock Pas 1-401 VenN V315R
 
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RRID:Addgene_47359 Clock Mus musculus Kanamycin PMID:22653727 Backbone Marker:Clontech; Vector Backbone:pEGFP-C1; Vector Types:Mammalian Expression; Bacterial Resistance:Kanamycin aa 1-401, V315R 2026-08-15 01:15:41 0
pCDNA3-HA/Bmal F423R/V435R/W427R
 
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RRID:Addgene_47351 BMAL Mus musculus Ampicillin PMID:22653727 Vector Backbone:pcDNA3.1; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin F423R/V435R/W427R 2026-08-15 01:15:40 0
pCDNA3-HA/Bmal L95E/L150E/W427A
 
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RRID:Addgene_47352 BMAL Mus musculus Ampicillin PMID:22653727 Vector Backbone:pcDNA3.1; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin L95E/L150E/W427A 2026-08-15 01:15:40 0
pCDNA3-HA/Bmal L150E
 
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RRID:Addgene_47346 BMAL Mus musculus Ampicillin PMID:22653727 Vector Backbone:pcDNA3.1; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin L150E 2026-08-15 01:15:40 0
pCDNA3-HA/Bmal L95E
 
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RRID:Addgene_47344 BMAL Mus musculus Ampicillin PMID:22653727 Vector Backbone:pcDNA3.1; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin L95E 2026-08-15 01:15:41 0
pCDNA3-HA/Bmal W427A
 
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RRID:Addgene_47349 BMAL Mus musculus Ampicillin PMID:22653727 Vector Backbone:pcDNA3.1; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin W427A 2026-08-15 01:15:40 0
pCMV10/3xflag-Clock F122D
 
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RRID:Addgene_47340 Clock Mus musculus Ampicillin PMID:22653727 Backbone Marker:sigma; Vector Backbone:pCMV103Xflag; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin F122D 2026-08-15 01:15:40 0
pfastbac/mBmal62-447
 
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RRID:Addgene_47335 BMAL Mus musculus Ampicillin PMID:22653727 Vector Backbone:pfastbac; Vector Types:; Bacterial Resistance:Ampicillin aa 62-447 2026-08-15 01:15:41 0
pCMV10/3xflag-Clock L74E
 
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RRID:Addgene_47338 Clock Mus musculus Ampicillin PMID:22653727 Backbone Marker:sigma; Vector Backbone:pCMV103Xflag; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin L74E 2026-08-15 01:15:41 0
TAL3576
 
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RRID:Addgene_47295 ZebrafishCommunity-tetmethylcytosinedioxygenase3(previous si:ch211-220a11.1)-left Danio rerio Ampicillin PMID:21822241 Target binding site: TCAAATCCTGAATCTCAA It is strongly recommended that users perform a diagnostic digest to verify this plasmid prior to use. For example, a double digest of the plasmid with BamHI and KpnI should result in two bands at 2.3kb and 5.8kb. Backbone Marker:Addgene plasmid #32285; Backbone Size:6447; Vector Backbone:JDS70; Vector Types:Mammalian Expression, T7; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 0
TAL3573
 
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RRID:Addgene_47292 ZebrafishCommunity-tetmethylcytosinedioxygenase1(previous-right Danio rerio Ampicillin PMID:21822241 Target binding site: TCATGGAAGCCTTCACCC It is strongly recommended that users perform a diagnostic digest to verify this plasmid prior to use. For example, a double digest of the plasmid with BamHI and KpnI should result in two bands at 2.3kb and 5.8kb. Backbone Marker:Addgene plasmid #32287; Backbone Size:6447; Vector Backbone:JDS71; Vector Types:Mammalian Expression, T7; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 0
TAL3579
 
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RRID:Addgene_47298 ZebrafishCommunity-TIMM22-right Danio rerio Ampicillin PMID:21822241 Target binding site: TTTGCATCAATGCCGG It is strongly recommended that users perform a diagnostic digest to verify this plasmid prior to use. For example, a double digest of the plasmid with BamHI and KpnI should result in two bands at 2.3kb and 5.8kb. Backbone Marker:Addgene plasmid #32288; Backbone Size:6447; Vector Backbone:JDS74; Vector Types:Mammalian Expression, T7; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 0
TAL3571
 
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RRID:Addgene_47290 ZebrafishCommunity-tbx4-right Danio rerio Ampicillin PMID:21822241 Target binding site: TGGGCAACGGTCATTCCT It is strongly recommended that users perform a diagnostic digest to verify this plasmid prior to use. For example, a double digest of the plasmid with BamHI and KpnI should result in two bands at 2.3kb and 5.8kb. Backbone Marker:Addgene plasmid #32290; Backbone Size:6447; Vector Backbone:JDS78; Vector Types:Mammalian Expression, T7; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 0
TAL3572
 
Resource Report
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RRID:Addgene_47291 ZebrafishCommunity-tetmethylcytosinedioxygenase1(previous-left Danio rerio Ampicillin PMID:21822241 Target binding site: TCAACTCGCGCATCCACA It is strongly recommended that users perform a diagnostic digest to verify this plasmid prior to use. For example, a double digest of the plasmid with BamHI and KpnI should result in two bands at 2.3kb and 5.8kb. Backbone Marker:Addgene plasmid #32285; Backbone Size:6447; Vector Backbone:JDS70; Vector Types:Mammalian Expression, T7; Bacterial Resistance:Ampicillin 2026-08-15 01:15:41 0
AU1-TTC30A2-pcDNA3
 
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RRID:Addgene_47324 TTC30A2 Mus musculus Ampicillin PMID:23810713 Backbone Marker:Invitrogen; Backbone Size:5546; Vector Backbone:pcDNA3; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 0
AU1-TTC30B-pcDNA3
 
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RRID:Addgene_47325 TTC30B Mus musculus Ampicillin PMID:23810713 Backbone Marker:Invitrogen; Backbone Size:5546; Vector Backbone:pcDNA3; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 0
pCS2-Cas9
 
Resource Report
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10+ mentions
RRID:Addgene_47322 Cas9 Other Ampicillin PMID:24873830 Please see the Schier lab website http://labs.mcb.harvard.edu/schier/ for detailed protocols about target site selection, sgRNA production, stop codon cassette design, Cas9 protein purification, injection and downstream analysis. This plasmid was used to prepare and inject Cas9 mRNA into zebrafish zygotes. Backbone Size:4095; Vector Backbone:pCS2; Vector Types:Mammalian Expression, CRISPR, xenopus and zebrafish expression; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 15
AU1-TTC30A1-pcDNA3
 
Resource Report
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RRID:Addgene_47323 TTC30A1 Mus musculus Ampicillin PMID:23810713 Backbone Marker:Invitrogen; Backbone Size:5546; Vector Backbone:pcDNA3; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin 2026-08-15 01:15:41 0
pBabe TIR1-9myc
 
Resource Report
Resource Website
10+ mentions
RRID:Addgene_47328 TRANSPORT INHIBITOR RESPONSE 1 Other Ampicillin PMID:23150568 Nishimura et al., 2009, Nature Methods Please note that this version contains a nuclear export signal. A related construct without the NES can be found at: http://www.addgene.org/64945/ Vector Backbone:pBabe-puro; Vector Types:Mammalian Expression, Retroviral; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 12
TAL3562
 
Resource Report
Resource Website
RRID:Addgene_47281 ZebrafishCommunity-stxbp1a-left Danio rerio Ampicillin PMID:21822241 Target binding site: TCAGCTTGCCCTGACCCC It is strongly recommended that users perform a diagnostic digest to verify this plasmid prior to use. For example, a double digest of the plasmid with BamHI and KpnI should result in two bands at 2.3kb and 5.8kb. Backbone Marker:Addgene plasmid #32287; Backbone Size:6447; Vector Backbone:JDS71; Vector Types:Mammalian Expression, T7; Bacterial Resistance:Ampicillin 2026-08-15 01:15:40 0

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